FFCP PHASE1:Hg19::chr8:59572547..59572556,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8439 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8017 | |||
|TSSclassifier=strong | |||
|UniProt=Q92636 | |||
|association_with_transcript=-143bp_to_NM_003580,uc003xtt.2,uc003xtu.2_5end | |||
|description=CAGE_peak_25_at_NSMAF_5end | |||
|id=chr8:59572547..59572556,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000039;2.80e-27;7!CL:0000586;2.80e-27;7!CL:0002032;5.70e-13;1!CL:0000557;5.70e-13;1!CL:0002593;4.04e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,3.11e-27,7;CL:0000586,3.11e-27,7;CL:0002593,4.69e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0009117;3.32e-19;10!UBERON:0005564;3.32e-19;10 | |||
|ontology_enrichment_disease=DOID:2531!4.07e-11!51;DOID:0060083!4.07e-11!51;DOID:1240!6.96e-10!39;DOID:8692!2.62e-09!31;DOID:14566!3.81e-08!239;DOID:162!5.11e-08!235 | |||
|ontology_enrichment_disease_v019=DOID:3095;2.35e-13;22!DOID:2994;2.35e-13;22!DOID:3193;4.04e-07;2!DOID:962;4.04e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,2.54e-13,22;DOID:2994,2.54e-13,22;DOID:3193,4.42e-07,2;DOID:962,4.42e-07,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;6.43e-24;8!UBERON:0003135;1.73e-17;11!UBERON:0000991;2.81e-09;21!UBERON:0003101;7.26e-09;22!UBERON:0000079;7.26e-09;22!UBERON:0003714;4.04e-07;2!UBERON:0002456;4.04e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,7.04e-24,8;UBERON:0003135,1.85e-17,11;UBERON:0000991,2.90e-09,21;UBERON:0009196,2.90e-09,21;UBERON:0009117,2.90e-09,21;UBERON:0005564,2.90e-09,21;UBERON:0004176,7.49e-09,22;UBERON:0003101,7.49e-09,22;UBERON:0000079,7.49e-09,22;UBERON:0003714,4.42e-07,2;UBERON:0002456,4.69e-07,2 | |||
|phase1_expression=0,0.428201047781966,0.140954404095971,0,0,0,2.53299878168311,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0.273748850145768,0,0.0764134057479513,0,0.0787107813136792,0,0,0,0,0,0,0.309868802321207,0.710846162437108,0.587200878669695,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0.641858054152187,0,0,0.199463657621632,0.852449501065388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19891667719909,0.182664153764634,0,0,1.77901850772711,0,0,0,0,0,0.569212969109448,0,0.764546456250458,0,0.560508562981536,0,0,0,0,0.167186495390678,0.651844533267181,0.946895611469467,0,0,0,0,0,0,0.130059347559878,0,0.276350017785848,0,0.14828656316206,0,0,0.226618685395132,0,1.03088233644789,0.253019692019503,0.318565414324097,0.651083453856419,0,0.150575119077773,0.383959833463255,0,0,0,0.201606743224732,0,0.144824403882799,0,0,0,0,0,0,0,0.486634870302636,0.0945348171640679,0,0,0,0,0,0,0.174129737299267,0.26591592103773,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.357198913136319,0,0,0,0,0.183201743930407,0,0,0,0.496971951695318,0,0.397227542439656,0,0,0,0,0,0.311211035399766,0.134710672069688,0,0,0.576175924479999,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0.277064115484183,0.438977620880838,0,0,0.113432183160021,0,0,0,0,0.103052529238439,0.257640540045629,0,0.168776332241266,0.0974370051611986,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0,0.168584690078102,0,0.110293972732394,0.217879444092406,0,0.404493924480493,0,0,0,0,0,0,0,0,0,1.7658523976586,0.122988438543114,0.171567810298526,0,0,0.100528972411631,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0.234004265139238,0.148631162288728,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0.063497894292169,0,0,0,0.102827492703324,0,0,0,0,0.1466765716419,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0.256686072559497,0.254094624222463,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0.356857977594324,0,0.234282829985426,0,2.27407504055985,0,0,0.184369168541703,0.173767228936166,0,0.343143423810856,0,0,0.106727557803444,0,0,0,0.248107807818777,0.153461973288062,0,0.128139149255701,0,0,0,0.154209693802656,0,0.0821271560138091,0,0.116210378459959,0.120859449591622,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193341436584244,0.154048617114644,0,0,0.107420244868274,0,0.170453254832202,0.0890320356467374,0.165284915360978,0,0,0.2023155617111,0,0,0,0,0.532306030317022,0,0,0,0,0.316379424718726,0.190630193923825,0,0.42793898803392,0,0,0.359744915166629,0,0.117812402345686,0,0,0,0,0,1.05650146756755,0.136499911407986,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0.35667105148125,0,0.211107635297664,0.329294892959902,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0.962479855263359,0,0.557409525377156,0.144269212976445,0.142283686696828,0.318852545457645,0.798317485731266,0.383010740264733,0.423347165447766,0.324621940274555,0,0.684704037099577,0.156679895773023,0,0.338583555603207,0,0.403599414382095,0,0.343505344755765,1.53620382154229,1.11838053946208,1.00109485027145,0.19538809540204,0,0,0.270455678475983,0.33307196799782,0,0,0,0,0,0,0.23874448473769,0,0.307160702099232,0,0,0.222617410045812,0,0.211125408127993,0,0.276283915531148,0,0.306806047506464,0,0.311039587661807,0.0898683511473268,0,2.04628948090749,0.197286811273867,0,0,0,0.0927680981618513,0,0,0,0,0,0.254253650292766,0.236387681767936,0,0,0,0,0.241192877250816,0,0,0,0,0,0,0.153900517007594,0.113942055847001,0,0.0897576444097721,0,0,0.0915975934018623,0,0,0.31396051279005,0.166211681900156,0,0,0.167821586975843,0.189753732724185,0.158936578980379,0.210998064528027,0,0,0,0,0.0884575645033392,0,0,0,0.104421949505455,0.067401132980677,0,0,0.91227394607833,0,0,0,0,0,0.252746318513952,0.150323419414493,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0.171986032471617,0,0.0730893170861856,0,0.0969890164884194,0,0,0.137041924646751,0,0,0,0.0801588202515337,0.213452994739353,0,0,0.114536596165916,0,0,0.248505071130865,0,0,0,0,0.288950589901519,0,0.136905378891993,1.27746588066972,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0.0787831823072236,0,0.0674035438541849,0,0.0846733320657845,0,0,0.482259445395058,0.137539436597234,0,0,0,0.121499113316049,0,0.0788057072991982,0,0.105600336519406,0,0.191915197319445,0,0,0,0,0,0,1.19730191562487,0.246277562248017,0,0.113312091520126,0.146552233678082,0,0.129282956361551,0,0,0,0,0.157204305099666,0,0,0.197611631897944,0.121792598380896,0,0.544017803369474,0,0,0.327872630709804,0.157054096250234,0,0,0,0,0,0,0,0,0,0.285465333544967,0,0,0,0.298509605773748,0.233713309847224,0,0,0,0,0.228840068396924,0.151230923763239,0,0,0.159296767163702,0,0.155262956876259,0,0,0,0.150257608997218,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0.260994291965212,0,0.231522474323834,0,0,0,0,0.176689145945881,0,0,0,0.345430341731199,0,0,0,0.398594520940089,0,0.327609848846413,0.245772908753719,0,0,0.213383459388282,0,0,0,0.139879507719444,0,0,0.1078248113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| |||
|short_description=p25@NSMAF | |||
}} |
Revision as of 22:11, 22 January 2014
Short description: | p25@NSMAF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_25_at_NSMAF_5end |
Coexpression cluster: | NA |
Association with transcript: | -143bp_to_NM_003580, uc003xtt.2, uc003xtu.2_5end |
EntrezGene: | NSMAF |
HGNC: | 8017 |
UniProt: | Q92636 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 3.11e-27 | 7 |
germ cell | 3.11e-27 | 7 |
smooth muscle cell of the internal thoracic artery | 4.69e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
testis | 7.04e-24 | 8 |
male reproductive organ | 1.85e-17 | 11 |
gonad | 2.90e-09 | 21 |
indifferent external genitalia | 2.90e-09 | 21 |
indifferent gonad | 2.90e-09 | 21 |
gonad primordium | 2.90e-09 | 21 |
external genitalia | 7.49e-09 | 22 |
male organism | 7.49e-09 | 22 |
male reproductive system | 7.49e-09 | 22 |
neural tissue | 4.42e-07 | 2 |
internal thoracic artery | 4.69e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 2.54e-13 | 22 |
germ cell cancer | 2.54e-13 | 22 |
peripheral nerve sheath neoplasm | 4.42e-07 | 2 |
neurofibroma | 4.42e-07 | 2 |