FFCP PHASE1:Hg19::chr8:82598511..82598570,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3612 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6050 | |||
|TSSclassifier=strong | |||
|UniProt=B4DLN3,P29218,E5RG94,E5RI82,E5RHE9,E5RIP7,E5RG13,E5RIF4 | |||
|association_with_transcript=0bp_to_ENST00000311489,ENST00000449740,ENST00000518188,ENST00000518202,ENST00000519816,ENST00000519964,ENST00000521360,ENST00000521979,ENST00000523710_5end | |||
|description=CAGE_peak_1_at_IMPA1_5end | |||
|id=chr8:82598511..82598570,- | |||
|ontology_enrichment_celltype=CL:0000738!7.76e-15!140;CL:0000037!1.29e-13!172;CL:0000566!1.29e-13!172;CL:0002032!3.99e-13!165;CL:0000837!3.99e-13!165;CL:0000988!2.07e-12!182;CL:0002031!1.82e-10!124;CL:0002087!4.98e-10!119;CL:0000542!4.54e-09!53;CL:0000051!4.54e-09!53;CL:0000838!1.36e-08!52 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.51e-15,136;CL:0000037,3.52e-14,168;CL:0002032,1.08e-13,161;CL:0000837,1.08e-13,161;CL:0000988,2.49e-13,177;CL:0002031,4.67e-11,120;CL:0002087,1.28e-10,115;CL:0000542,4.54e-09,53;CL:0000051,4.54e-09,53;CL:0000838,1.36e-08,52 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002780!3.89e-10!41;UBERON:0001890!3.89e-10!41;UBERON:0006240!3.89e-10!41;UBERON:0003080!2.19e-09!42;UBERON:0005743!3.55e-09!86;UBERON:0000073!9.86e-09!94;UBERON:0001016!9.86e-09!94;UBERON:0001017!1.30e-08!82;UBERON:0001049!1.33e-08!57;UBERON:0005068!1.33e-08!57;UBERON:0006241!1.33e-08!57;UBERON:0007135!1.33e-08!57;UBERON:0001893!3.95e-08!34;UBERON:0001869!1.10e-07!32;UBERON:0002791!1.23e-07!33;UBERON:0002020!1.32e-07!34;UBERON:0003528!1.32e-07!34;UBERON:0002616!3.78e-07!59;UBERON:0000955!6.44e-07!69;UBERON:0006238!6.44e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;2.17e-07;34!UBERON:0002780;3.47e-07;41!UBERON:0001890;3.47e-07;41!UBERON:0001869;4.76e-07;32!UBERON:0002791;8.14e-07;32!UBERON:0003528;8.62e-07;34!UBERON:0002020;8.62e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002780,3.89e-10,41;UBERON:0001890,3.89e-10,41;UBERON:0003080,3.89e-10,41;UBERON:0006240,3.89e-10,41;UBERON:0001049,3.46e-09,56;UBERON:0005068,3.46e-09,56;UBERON:0006241,3.46e-09,56;UBERON:0007135,3.46e-09,56;UBERON:0001017,4.41e-09,81;UBERON:0000073,6.11e-09,53;UBERON:0002616,6.11e-09,53;UBERON:0001016,1.31e-08,89;UBERON:0001893,3.95e-08,34;UBERON:0001869,1.10e-07,32;UBERON:0003528,1.32e-07,34;UBERON:0002020,1.32e-07,34;UBERON:0002791,2.05e-07,32;UBERON:0000955,2.30e-07,68;UBERON:0006238,2.30e-07,68 | |||
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| |||
|short_description=p1@IMPA1 | |||
}} |
Revision as of 22:42, 22 January 2014
Short description: | p1@IMPA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_IMPA1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000311489, ENST00000449740, ENST00000518188, ENST00000518202, ENST00000519816, ENST00000519964, ENST00000521360, ENST00000521979, ENST00000523710_5end |
EntrezGene: | IMPA1 |
HGNC: | 6050 |
UniProt: | B4DLN3P29218E5RG94E5RI82E5RHE9E5RIP7E5RG13E5RIF4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.51e-15 | 136 |
hematopoietic stem cell | 3.52e-14 | 168 |
hematopoietic oligopotent progenitor cell | 1.08e-13 | 161 |
hematopoietic multipotent progenitor cell | 1.08e-13 | 161 |
hematopoietic cell | 2.49e-13 | 177 |
hematopoietic lineage restricted progenitor cell | 4.67e-11 | 120 |
nongranular leukocyte | 1.28e-10 | 115 |
lymphocyte | 4.54e-09 | 53 |
common lymphoid progenitor | 4.54e-09 | 53 |
lymphoid lineage restricted progenitor cell | 1.36e-08 | 52 |
Ontology term | p-value | n |
---|---|---|
regional part of forebrain | 3.89e-10 | 41 |
forebrain | 3.89e-10 | 41 |
anterior neural tube | 3.89e-10 | 41 |
future forebrain | 3.89e-10 | 41 |
neural tube | 3.46e-09 | 56 |
neural rod | 3.46e-09 | 56 |
future spinal cord | 3.46e-09 | 56 |
neural keel | 3.46e-09 | 56 |
central nervous system | 4.41e-09 | 81 |
regional part of nervous system | 6.11e-09 | 53 |
regional part of brain | 6.11e-09 | 53 |
nervous system | 1.31e-08 | 89 |
telencephalon | 3.95e-08 | 34 |
cerebral hemisphere | 1.10e-07 | 32 |
brain grey matter | 1.32e-07 | 34 |
gray matter | 1.32e-07 | 34 |
regional part of telencephalon | 2.05e-07 | 32 |
brain | 2.30e-07 | 68 |
future brain | 2.30e-07 | 68 |