FFCP PHASE1:Hg19::chr8:105212349..105212367,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr8:105212349..105212367,+ | |||
|id=chr8:105212349..105212367,+ | |||
|ontology_enrichment_celltype=CL:0000066!6.32e-16!254;CL:0002621!8.16e-13!3;CL:0002166!1.20e-12!3;CL:0002328!1.01e-11!3;CL:0000077!4.08e-11!19;CL:0002368!1.70e-09!13;CL:0002536!2.42e-08!2;CL:0002537!1.70e-07!5;CL:0000076!3.93e-07!62;CL:0002076!9.88e-07!43 | |||
|ontology_enrichment_celltype_v019=CL:0002621;1.43e-43;3!CL:0002166;6.51e-43;3!CL:0002159;9.95e-10;14!CL:0002535;1.20e-08;2!CL:0002251;4.61e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002621,1.43e-43,3;CL:0002166,6.07e-43,3;CL:0002159,9.81e-10,14;CL:0002535,1.20e-08,2;CL:0000066,3.65e-08,253;CL:0002251,4.62e-07,20 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000305!2.22e-13!7;UBERON:0001949!8.16e-13!3;UBERON:0005631!2.34e-12!14;UBERON:0000158!2.34e-12!14;UBERON:0004815!1.01e-11!3;UBERON:0002031!1.01e-11!3;UBERON:0004871!1.15e-11!8;UBERON:0001708!1.39e-09!4;UBERON:0001704!1.39e-09!4;UBERON:0002185!6.75e-09!4;UBERON:0000478!8.94e-07!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0001949;1.43e-43;3!UBERON:0001708;2.14e-32;4!UBERON:0008895;2.14e-32;4!UBERON:0011159;4.48e-26;5!UBERON:0000486;1.97e-19;12!UBERON:0003929;4.10e-19;7!UBERON:0003350;8.26e-17;8!UBERON:0001828;8.26e-17;8!UBERON:0011137;3.19e-12;11!UBERON:0010323;3.19e-12;11!UBERON:0003729;1.40e-10;13!UBERON:0006955;1.20e-08;2!UBERON:0004801;1.20e-08;2!UBERON:0000075;1.40e-08;16!UBERON:0010371;1.34e-07;31!UBERON:0000161;2.08e-07;19!UBERON:0000166;2.08e-07;19!UBERON:0000344;4.61e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,1.43e-43,3;UBERON:0001708,2.03e-32,4;UBERON:0008895,2.03e-32,4;UBERON:0011159,4.29e-26,5;UBERON:0010188,7.19e-22,6;UBERON:0002539,7.19e-22,6;UBERON:0008816,7.19e-22,6;UBERON:0003350,8.26e-17,8;UBERON:0001828,8.26e-17,8;UBERON:0010323,3.13e-12,11;UBERON:0000033,5.81e-12,56;UBERON:0000153,9.35e-11,62;UBERON:0007811,9.35e-11,62;UBERON:0003729,1.40e-10,13;UBERON:0011137,9.81e-10,14;UBERON:0006955,1.20e-08,2;UBERON:0004801,1.20e-08,2;UBERON:0000075,1.38e-08,16;UBERON:0008814,1.09e-07,18;UBERON:0000344,4.62e-07,20 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.873765488520689,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0.30120591877825,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.954053754535364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,2.31913023795956,5.45492241181669,3.15485054927904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329250856225877,0,0,0.277765335475589,0,0,1.44331342025273,0,0,0,0,0,0,0,0,0,0,1.87467667973554,5.71139235876122,1.41775097242386,0.358234090811393,0.581267877027924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0.473107245101804,0,0,0,0,0,0,0,0,0,0,0,0,0,4.99306318531491,0.30239029332968,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.577332676353072,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.71623345421307,1.48482340416319,0.921482106297696,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,11.1435784422915,0,0,0,0,0,0,0,0,0,0,0,0,0.400794101257669,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226705925512272,1.389134845943,1.95789363605174,0.179088841081487,0,0,0.176689145945881,0.964570191354574,0,0,0.690860683462397,0.303859956177382,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0,0.781078098613847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77290761325952,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24127426343202,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr8:105212349..105212367,+ | |||
}} |
Revision as of 23:17, 22 January 2014
Short description: | p@chr8:105212349..105212367, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:105212349..105212367, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gingival epithelial cell | 1.43e-43 | 3 |
epithelial cell of Malassez | 6.07e-43 | 3 |
general ecto-epithelial cell | 9.81e-10 | 14 |
epithelial cell of cervix | 1.20e-08 | 2 |
epithelial cell | 3.65e-08 | 253 |
epithelial cell of alimentary canal | 4.62e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 1.43e-43 | 3 |
jaw skeleton | 2.03e-32 | 4 |
splanchnocranium | 2.03e-32 | 4 |
primary subdivision of cranial skeletal system | 4.29e-26 | 5 |
protuberance | 7.19e-22 | 6 |
pharyngeal arch | 7.19e-22 | 6 |
embryonic head | 7.19e-22 | 6 |
epithelium of mucosa | 8.26e-17 | 8 |
gingiva | 8.26e-17 | 8 |
cranial skeletal system | 3.13e-12 | 11 |
head | 5.81e-12 | 56 |
anterior region of body | 9.35e-11 | 62 |
craniocervical region | 9.35e-11 | 62 |
mouth mucosa | 1.40e-10 | 13 |
axial skeletal system | 9.81e-10 | 14 |
uterine epithelium | 1.20e-08 | 2 |
cervix epithelium | 1.20e-08 | 2 |
subdivision of skeletal system | 1.38e-08 | 16 |
pharyngeal arch system | 1.09e-07 | 18 |
mucosa | 4.62e-07 | 20 |