FFCP PHASE1:Hg19::chr9:130899696..130899707,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr9:130899696..130899707,+ | |||
|id=chr9:130899696..130899707,+ | |||
|ontology_enrichment_celltype=CL:0000066!4.33e-08!254;CL:0002536!6.90e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0002178;1.28e-17;3!CL:1001319;5.85e-14;1!CL:1000600;5.85e-14;1!CL:1000415;1.50e-07;2!CL:0002535;1.99e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002178,1.18e-17,3;CL:1001319,5.15e-14,1;CL:1000600,5.15e-14,1;CL:1000415,1.45e-07,2;CL:0002535,1.99e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!1.22e-10!106;DOID:299!3.53e-10!25;DOID:4929!2.09e-07!2;DOID:0050687!4.10e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:4929;2.37e-25;2!DOID:299;2.70e-12;25!DOID:3119;1.45e-08;14!DOID:3493;1.05e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4929,1.27e-25,2;DOID:299,2.39e-12,25;DOID:3119,1.34e-08,14;DOID:305,1.99e-08,106;DOID:3493,1.05e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0000178!3.33e-12!15;UBERON:0000179!3.33e-12!15;UBERON:0000463!3.33e-12!15;UBERON:0000162!1.71e-08!14;UBERON:0001353!1.71e-08!14;UBERON:0000163!1.71e-08!14;UBERON:0006866!1.71e-08!14;UBERON:0000164!1.71e-08!14;UBERON:0000931!1.71e-08!14;UBERON:0005156!1.96e-08!59;UBERON:0000990!1.96e-08!59;UBERON:0004122!7.31e-08!15;UBERON:0000995!8.85e-08!21;UBERON:0005795!2.32e-07!22;UBERON:0003975!2.32e-07!22;UBERON:0001255!9.50e-07!2;UBERON:0001556!9.50e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.98e-21;15!UBERON:0000179;4.98e-21;15!UBERON:0000463;4.98e-21;15!UBERON:0004645;5.85e-14;1!UBERON:0001256;5.85e-14;1!UBERON:0001259;5.85e-14;1!UBERON:0004913;1.42e-13;1!UBERON:0003703;1.42e-13;1!UBERON:0001174;1.42e-13;1!UBERON:0004914;1.42e-13;1!UBERON:0000945;5.85e-11;5!UBERON:0010039;5.85e-11;5!UBERON:0002390;4.30e-09;32!UBERON:0002294;5.37e-08;7!UBERON:0001173;5.37e-08;7!UBERON:0001255;1.27e-07;2!UBERON:0001556;1.27e-07;2!UBERON:0006955;1.99e-07;2!UBERON:0004801;1.99e-07;2!UBERON:0002075;8.75e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,5.53e-21,15;UBERON:0000179,5.53e-21,15;UBERON:0000463,5.53e-21,15;UBERON:0004645,5.15e-14,1;UBERON:0001256,5.15e-14,1;UBERON:0001259,5.15e-14,1;UBERON:0004913,1.10e-13,1;UBERON:0003703,1.10e-13,1;UBERON:0001174,1.10e-13,1;UBERON:0004914,1.10e-13,1;UBERON:0001255,1.20e-07,2;UBERON:0001556,1.20e-07,2;UBERON:0006955,1.99e-07,2;UBERON:0004801,1.99e-07,2;UBERON:0000945,3.45e-07,8;UBERON:0010039,3.45e-07,8;UBERON:0002075,8.00e-07,18 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.436882744260345,0.527533956456907,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335964256397719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431428401637234,0,0,4.99306318531491,0.30239029332968,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0.200506470303285,0.184161977871793,0,0,0,0.451199612907412,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.86101074534246,0,0,0,2.02979043692868,4.58782324285425,3.41788312304498,0.714695326373367,0,0.648473311192717,3.24018862342869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568272293612826,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0.102268682502155,0,0,0.449341755736634,0,0,0.0986434056369336,7.18449277040819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278847488557207,0.461701551022782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326465616318295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313932918407225,0,0.284609546029793,0,0,0,1.39294730528644,0,0,0,0,0,0,0,0,0,0,0,0,2.40476460754601,0,1.59847687665704,0,0,0,0,0.124252535565433,0,0,0.209205692624666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0.383830394638891,0,0,0,0,0,0,1.19730191562487,0,0,0,0,0,0,0,0.171086837884329,0.704815022316672,0,0,0,0,0,0,1.27668251554036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449803112163605,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0,0,0.422624246717254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.981477185010256,0,0,0,0,0,0,0,0,0,0,0,1.6264169483875,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0.118193840883968,0.111231401892069,0.078493092850514,0,0,0,0.431855182437243,0,0,0,0,0,0.801711364730253,0,0,0,0,0.236664001461131,0.0852134047591577,0,1.3746412112643,0.62041277132864,0,0,4.80936144714691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462175628631418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0.0673520530145875,0.143444410785353,0.332660356546013,3.90735689332678,0.106727345877715,0,1.79650404213174,0,0,0,0,0,0 | |||
|short_description=p@chr9:130899696..130899707,+ | |||
}} |
Revision as of 03:29, 23 January 2014
Short description: | p@chr9:130899696..130899707, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:130899696..130899707, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 1.18e-17 | 3 |
bladder cell | 5.15e-14 | 1 |
lower urinary tract cell | 5.15e-14 | 1 |
epithelial cell of gall bladder | 1.45e-07 | 2 |
epithelial cell of cervix | 1.99e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 5.53e-21 | 15 |
haemolymphatic fluid | 5.53e-21 | 15 |
organism substance | 5.53e-21 | 15 |
urinary bladder urothelium | 5.15e-14 | 1 |
wall of urinary bladder | 5.15e-14 | 1 |
mucosa of urinary bladder | 5.15e-14 | 1 |
hepatopancreatic ampulla | 1.10e-13 | 1 |
extrahepatic bile duct | 1.10e-13 | 1 |
common bile duct | 1.10e-13 | 1 |
duodenal papilla | 1.10e-13 | 1 |
urinary bladder | 1.20e-07 | 2 |
lower urinary tract | 1.20e-07 | 2 |
uterine epithelium | 1.99e-07 | 2 |
cervix epithelium | 1.99e-07 | 2 |
stomach | 3.45e-07 | 8 |
food storage organ | 3.45e-07 | 8 |
viscus | 8.00e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
tubular adenocarcinoma | 1.27e-25 | 2 |
adenocarcinoma | 2.39e-12 | 25 |
gastrointestinal system cancer | 1.34e-08 | 14 |
carcinoma | 1.99e-08 | 106 |
signet ring cell adenocarcinoma | 1.05e-07 | 2 |