Personal tools

CL:0000126: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{CL
{{CL
|id=CL:0000126
|alt_id=
|name=macroglial cell
|namespace=cell
|def="A neuroglial cell of ectodermal origin, i.e., the astrocytes and oligodendrocytes considered together." [GOC:tfm, ISBN:0721662544]
|xref=BTO:0000771;;FMA:54538
|is_a=CL:0000243
|synonym="macrogliocyte" EXACT []
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="A neuroglial cell of ectodermal origin, i.e., the astrocytes and oligodendrocytes considered together." [GOC:tfm, ISBN:0721662544]
|subset=
|derives_from=
|derives_from=
|develops_from=CL:0000339
|develops_from=CL:0000339
|disjoint_from=
|has_quality=
|has_quality=
|id=CL:0000126
|is_a=CL:0000243
|is_obsolete=
|located_in=
|located_in=
|name=macroglial cell
|namespace=cell
|obo_creation_date=
|part_of=
|part_of=
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym="macrogliocyte" EXACT []
|union_of=
|xref=BTO:0000771;;FMA:54538
}}
}}

Revision as of 10:14, 12 September 2014

Name:macroglial cell
Namespace:cell
Definition:"A neuroglial cell of ectodermal origin, i.e., the astrocytes and oligodendrocytes considered together." [GOC:tfm, ISBN:0721662544]
Xrefs:
links:

BTO:0000771

FMA:54538
Synonyms: "macrogliocyte" EXACT []


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:CL:0000243(glial cell (sensu Vertebrata))
develops_from:CL:0000339(glioblast (sensu Vertebrata))



Children


is a:CL:0000127 (astrocyte),CL:0000128 (oligodendrocyte),CL:2000005 (brain macroglial cell)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.

Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000126 (macroglial cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
6.94e-140FFCP PHASE1:Hg19::chr4:169553987..169553999,+#_6300da8da1a93d0e7f817c67e310ff2bp@chr4:169553987..169553999, +
6.94e-140FFCP PHASE2:Hg19::chr4:169553987..169553999,+#_6300da8da1a93d0e7f817c67e310ff2bp@chr4:169553987..169553999, +
1.28e-84FFCP PHASE1:Hg19::chr9:122602283..122602290,-#_1b1718ed5bea392b556a41ee4b03192ap@chr9:122602283..122602290, -
1.28e-84FFCP PHASE2:Hg19::chr9:122602283..122602290,-#_1b1718ed5bea392b556a41ee4b03192ap@chr9:122602283..122602290, -
6.32e-78FFCP PHASE1:Hg19::chr2:48919725..48919761,+#_570d2e6fe5bce6c13fa0324df1c308bap@chr2:48919725..48919761, +
6.32e-78FFCP PHASE2:Hg19::chr2:48919725..48919761,+#_570d2e6fe5bce6c13fa0324df1c308bap@chr2:48919725..48919761, +
8.34e-78FFCP PHASE1:Hg19::chr2:48919688..48919703,+#_8b1f711985bff341109a9117c040929ap@chr2:48919688..48919703, +
8.34e-78FFCP PHASE2:Hg19::chr2:48919688..48919703,+#_8b1f711985bff341109a9117c040929ap@chr2:48919688..48919703, +
1.79e-75FFCP PHASE1:Hg19::chr9:127025189..127025200,+#_51aca3c035a9d2320801f33c27c99290p1@ENST00000437461
1.79e-75FFCP PHASE2:Hg19::chr9:127025189..127025200,+#_51aca3c035a9d2320801f33c27c99290p1@ENST00000437461
1.79e-75FFCP PHASE2:Hg19::chr11:68808268..68808276,-#_51aca3c035a9d2320801f33c27c99290p@chr11:68808268..68808276, -
1.79e-75FFCP PHASE1:Hg19::chr11:68808268..68808276,-#_51aca3c035a9d2320801f33c27c99290p@chr11:68808268..68808276, -
2.17e-75FFCP PHASE1:Hg19::chr13:99349888..99349893,+#_c9c670b5b5ba3e286199956ec8298b2ep@chr13:99349888..99349893, +
2.17e-75FFCP PHASE2:Hg19::chr13:99349888..99349893,+#_c9c670b5b5ba3e286199956ec8298b2ep@chr13:99349888..99349893, +
2.83e-68FFCP PHASE1:Hg19::chr22:30176932..30176938,+#_4431d4034ea006c94587dcaa0d5a5ad9p@chr22:30176932..30176938, +
2.83e-68FFCP PHASE2:Hg19::chr22:30176932..30176938,+#_4431d4034ea006c94587dcaa0d5a5ad9p@chr22:30176932..30176938, +
2.25e-65FFCP PHASE1:Mm9::chr8:96704054..96704065,-#_2579e0133d5e6e536c36a0a951ce318ap@chr8:96704054..96704065, -
2.25e-65FFCP PHASE2:Mm9::chr8:96704054..96704065,-#_2579e0133d5e6e536c36a0a951ce318ap@chr8:96704054..96704065, -
1.33e-60FFCP PHASE2:Mm9::chr14:70592673..70592699,-#_3074a409b5a7bdc3a21b7987d7c26042p@chr14:70592673..70592699, -
1.33e-60FFCP PHASE1:Mm9::chr1:72895689..72895698,-#_3074a409b5a7bdc3a21b7987d7c26042p@chr1:72895689..72895698, -
1.33e-60FFCP PHASE1:Mm9::chr14:70592673..70592699,-#_3074a409b5a7bdc3a21b7987d7c26042p@chr14:70592673..70592699, -
1.33e-60FFCP PHASE2:Mm9::chr1:72895689..72895698,-#_3074a409b5a7bdc3a21b7987d7c26042p@chr1:72895689..72895698, -
2.34e-60FFCP PHASE1:Mm9::chr1:72898728..72898736,+#_35ceeb513fd93e04c70b53ced516170dp@chr1:72898728..72898736, +
2.34e-60FFCP PHASE2:Mm9::chr1:72898728..72898736,+#_35ceeb513fd93e04c70b53ced516170dp@chr1:72898728..72898736, +
3.91e-58FFCP PHASE1:Mm9::chr7:29152679..29152684,-#_052d189224e4f67f54a109695684017bp@chr7:29152679..29152684, -
3.91e-58FFCP PHASE2:Mm9::chr7:29152679..29152684,-#_052d189224e4f67f54a109695684017bp@chr7:29152679..29152684, -
3.91e-58FFCP PHASE2:Mm9::chr9:43915826..43915844,+#_052d189224e4f67f54a109695684017bp@chr9:43915826..43915844, +
3.91e-58FFCP PHASE2:Mm9::chr6:92777773..92777784,+#_052d189224e4f67f54a109695684017bp4@ENSMUST00000133858
3.91e-58FFCP PHASE1:Mm9::chr6:92777773..92777784,+#_052d189224e4f67f54a109695684017bp4@ENSMUST00000133858
3.91e-58FFCP PHASE1:Mm9::chr9:43915826..43915844,+#_052d189224e4f67f54a109695684017bp@chr9:43915826..43915844, +
4.76e-57FFCP PHASE1:Hg19::chr8:32488262..32488265,+#_32adb6b36d54c4678122bd6c13f75087p@chr8:32488262..32488265, +
4.76e-57FFCP PHASE2:Hg19::chr8:32488262..32488265,+#_32adb6b36d54c4678122bd6c13f75087p@chr8:32488262..32488265, +
8.4e-54FFCP PHASE1:Hg19::chr6:45296191..45296203,+#_3bb7c7d5a6f4eb57022976d0b76b73fep13@RUNX2
8.4e-54FFCP PHASE2:Hg19::chr6:45296191..45296203,+#_3bb7c7d5a6f4eb57022976d0b76b73fep13@RUNX2
2.53e-52FFCP PHASE1:Mm9::chr19:17030554..17030565,+#_ff410747d20dddd17654f1d5c028e27dp5@Prune2
2.53e-52FFCP PHASE2:Mm9::chr19:17030554..17030565,+#_ff410747d20dddd17654f1d5c028e27dp5@Prune2
3.23e-52FFCP PHASE2:Mm9::chr14:70592626..70592638,-#_159c3cf932ab2c591b84890397722f34p@chr14:70592626..70592638, -
3.23e-52FFCP PHASE1:Mm9::chr14:70592626..70592638,-#_159c3cf932ab2c591b84890397722f34p@chr14:70592626..70592638, -
4.11e-52FFCP PHASE1:Mm9::chr8:28132545..28132551,+#_4c0469572ca501433e93f7055e368afep@chr8:28132545..28132551, +
4.11e-52FFCP PHASE2:Mm9::chr1:72873192..72873206,+#_4c0469572ca501433e93f7055e368afep@chr1:72873192..72873206, +
4.11e-52FFCP PHASE1:Mm9::chr1:72873192..72873206,+#_4c0469572ca501433e93f7055e368afep@chr1:72873192..72873206, +
4.11e-52FFCP PHASE2:Mm9::chr8:28132545..28132551,+#_4c0469572ca501433e93f7055e368afep@chr8:28132545..28132551, +
5.23e-52FFCP PHASE2:Mm9::chr1:72898789..72898796,+#_e1be26baf272796b0b2e8935b0faf0d8p@chr1:72898789..72898796, +
5.23e-52FFCP PHASE1:Mm9::chr9:37174919..37174932,+#_e1be26baf272796b0b2e8935b0faf0d8p3@Hepacam
5.23e-52FFCP PHASE2:Mm9::chr9:37174919..37174932,+#_e1be26baf272796b0b2e8935b0faf0d8p3@Hepacam
5.23e-52FFCP PHASE1:Mm9::chr1:72898789..72898796,+#_e1be26baf272796b0b2e8935b0faf0d8p@chr1:72898789..72898796, +
2.3e-51FFCP PHASE1:Hg19::chr7:42192092..42192108,-#_522b77efa5fc3c3218435536aa218a43p13@GLI3
2.3e-51FFCP PHASE2:Hg19::chr7:42192092..42192108,-#_522b77efa5fc3c3218435536aa218a43p13@GLI3
3.85e-51FFCP PHASE2:Hg19::chr20:35856764..35856768,+#_db23cf835e5ba8347a4cc0f76d53f0cbp25@RPN2
3.85e-51FFCP PHASE1:Hg19::chr20:35856764..35856768,+#_db23cf835e5ba8347a4cc0f76d53f0cbp25@RPN2
5.43e-51FFCP PHASE2:Hg19::chr14:33403217..33403226,+#_41841675969cc9a547f4f5b93ff5e0cfp@chr14:33403217..33403226, +
5.43e-51FFCP PHASE1:Hg19::chr14:33403217..33403226,+#_41841675969cc9a547f4f5b93ff5e0cfp@chr14:33403217..33403226, +
6.95e-51FFCP PHASE1:Hg19::chr4:169553961..169553972,+#_2bda9a1b00cf61e20584897400dc56a9p@chr4:169553961..169553972, +
6.95e-51FFCP PHASE2:Hg19::chr4:169553961..169553972,+#_2bda9a1b00cf61e20584897400dc56a9p@chr4:169553961..169553972, +
7.9e-51FFCP PHASE1:Hg19::chr1:98642833..98642844,+#_a981f66dea8b9be4e810785c87b41578p@chr1:98642833..98642844, +
7.9e-51FFCP PHASE2:Hg19::chr1:98642833..98642844,+#_a981f66dea8b9be4e810785c87b41578p@chr1:98642833..98642844, +
8.98e-51FFCP PHASE1:Hg19::chr1:98518907..98518920,+#_f5dbf957567d9aa00a31e553b77cf6b5p@chr1:98518907..98518920, +
8.98e-51FFCP PHASE2:Hg19::chr1:98518907..98518920,+#_f5dbf957567d9aa00a31e553b77cf6b5p@chr1:98518907..98518920, +
4.49e-48FFCP PHASE2:Mm9::chr1:72895732..72895747,-#_d0857f43426660779c0153620213604ap@chr1:72895732..72895747, -
4.49e-48FFCP PHASE1:Mm9::chr1:72895732..72895747,-#_d0857f43426660779c0153620213604ap@chr1:72895732..72895747, -
1.09e-46FFCP PHASE2:Mm9::chr8:73022520..73022524,+#_8d745f975a795f02717eda3d8e0b1377p@chr8:73022520..73022524, +
1.09e-46FFCP PHASE1:Mm9::chr8:73022520..73022524,+#_8d745f975a795f02717eda3d8e0b1377p@chr8:73022520..73022524, +
1.09e-46FFCP PHASE1:Mm9::chr1:72895881..72895885,-#_8d745f975a795f02717eda3d8e0b1377p@chr1:72895881..72895885, -
1.09e-46FFCP PHASE2:Mm9::chr1:72895881..72895885,-#_8d745f975a795f02717eda3d8e0b1377p@chr1:72895881..72895885, -
1.12e-46FFCP PHASE2:Hg19::chr4:77356957..77356973,+#_6ae5d9683e581b2d9c2b2967f47b6901p20@SHROOM3
1.12e-46FFCP PHASE1:Hg19::chr4:77356957..77356973,+#_6ae5d9683e581b2d9c2b2967f47b6901p20@SHROOM3
1.42e-46FFCP PHASE2:Mm9::chr19:40457627..40457636,-#_25af45ddda7ed5390d048b431425b387p9@Sorbs1
1.42e-46FFCP PHASE1:Mm9::chr19:40457627..40457636,-#_25af45ddda7ed5390d048b431425b387p9@Sorbs1
1.86e-46FFCP PHASE1:Mm9::chr3:88990698..88990709,+#_16af32e3e7f5380db9c8e36a968e084cp@chr3:88990698..88990709, +
1.86e-46FFCP PHASE2:Mm9::chr3:88990698..88990709,+#_16af32e3e7f5380db9c8e36a968e084cp@chr3:88990698..88990709, +
4.13e-46FFCP PHASE1:Mm9::chr19:8788690..8788697,-#_13835a953a5d9a5a7e79ebe3c8e9ea72p17@Slc3a2
4.13e-46FFCP PHASE2:Mm9::chr19:8788690..8788697,-#_13835a953a5d9a5a7e79ebe3c8e9ea72p17@Slc3a2
4.13e-46FFCP PHASE1:Mm9::chr19:8788816..8788826,-#_13835a953a5d9a5a7e79ebe3c8e9ea72p14@Slc3a2
4.13e-46FFCP PHASE2:Mm9::chr19:8788816..8788826,-#_13835a953a5d9a5a7e79ebe3c8e9ea72p14@Slc3a2
4.13e-46FFCP PHASE1:Mm9::chr11:7114172..7114182,-#_13835a953a5d9a5a7e79ebe3c8e9ea72p4@Igfbp3
4.13e-46FFCP PHASE2:Mm9::chr11:7114172..7114182,-#_13835a953a5d9a5a7e79ebe3c8e9ea72p4@Igfbp3
7.81e-46FFCP PHASE1:Mm9::chr11:7110185..7110197,-#_ca8793154a584be7e93296707de7f2d8p@chr11:7110185..7110197, -
7.81e-46FFCP PHASE2:Mm9::chr11:7110185..7110197,-#_ca8793154a584be7e93296707de7f2d8p@chr11:7110185..7110197, -
1.19e-45FFCP PHASE2:Mm9::chr8:11006242..11006246,-#_d4f1fad8fea7ce8bea77df70b167da00p@chr8:11006242..11006246, -
1.19e-45FFCP PHASE1:Mm9::chr8:11006242..11006246,-#_d4f1fad8fea7ce8bea77df70b167da00p@chr8:11006242..11006246, -
1.77e-45FFCP PHASE1:Hg19::chr5:135540733..135540788,-#_21e1c4780f00538afdcb94fdee86d532p@chr5:135540733..135540788, -
1.77e-45FFCP PHASE2:Hg19::chr5:135540733..135540788,-#_21e1c4780f00538afdcb94fdee86d532p@chr5:135540733..135540788, -
5.38e-44FFCP PHASE1:Mm9::chr11:45940767..45940771,+#_2ef7baf119905b42e632b754aa4f8abdp@chr11:45940767..45940771, +
5.38e-44FFCP PHASE2:Mm9::chr14:70592586..70592593,-#_2ef7baf119905b42e632b754aa4f8abdp@chr14:70592586..70592593, -
5.38e-44FFCP PHASE2:Mm9::chr11:66340488..66340520,-#_2ef7baf119905b42e632b754aa4f8abdp@chr11:66340488..66340520, -
5.38e-44FFCP PHASE1:Mm9::chr14:70592586..70592593,-#_2ef7baf119905b42e632b754aa4f8abdp@chr14:70592586..70592593, -
5.38e-44FFCP PHASE2:Mm9::chr12:86222392..86222395,-#_2ef7baf119905b42e632b754aa4f8abdp@chr12:86222392..86222395, -
5.38e-44FFCP PHASE2:Mm9::chr11:45940767..45940771,+#_2ef7baf119905b42e632b754aa4f8abdp@chr11:45940767..45940771, +
5.38e-44FFCP PHASE1:Mm9::chr1:154940591..154940634,+#_2ef7baf119905b42e632b754aa4f8abdp@chr1:154940591..154940634, +
5.38e-44FFCP PHASE2:Mm9::chr6:84135739..84135768,+#_2ef7baf119905b42e632b754aa4f8abdp@chr6:84135739..84135768, +
5.38e-44FFCP PHASE1:Mm9::chr6:84135739..84135768,+#_2ef7baf119905b42e632b754aa4f8abdp@chr6:84135739..84135768, +
5.38e-44FFCP PHASE2:Mm9::chr1:154940591..154940634,+#_2ef7baf119905b42e632b754aa4f8abdp@chr1:154940591..154940634, +
5.38e-44FFCP PHASE1:Mm9::chr11:66340488..66340520,-#_2ef7baf119905b42e632b754aa4f8abdp@chr11:66340488..66340520, -
5.38e-44FFCP PHASE1:Mm9::chr12:86222392..86222395,-#_2ef7baf119905b42e632b754aa4f8abdp@chr12:86222392..86222395, -
5.58e-44FFCP PHASE1:Mm9::chr1:72896186..72896195,+#_64360c815241fe7ae5800e9e72877fbfp@chr1:72896186..72896195, +
5.58e-44FFCP PHASE2:Mm9::chr1:72896186..72896195,+#_64360c815241fe7ae5800e9e72877fbfp@chr1:72896186..72896195, +
5.22e-43FFCP PHASE2:Hg19::chr12:41374792..41374806,+#_d3fa7e32e93554467378c6a8659cd3fep@chr12:41374792..41374806, +
5.22e-43FFCP PHASE1:Hg19::chr12:41374792..41374806,+#_d3fa7e32e93554467378c6a8659cd3fep@chr12:41374792..41374806, +
6.96e-43FFCP PHASE2:Hg19::chr2:104096987..104096993,-#_2b87ffa26700691c00ce0c3aff5e409dp@chr2:104096987..104096993, -
6.96e-43FFCP PHASE2:Hg19::chr11:60615014..60615025,+#_2b87ffa26700691c00ce0c3aff5e409dp8@CCDC86

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=CL:0000126&oldid=3271863"