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{{DOID
{{DOID
|id=DOID:0060122
|alt_id=
|name=integumentary system cancer
|namespace=disease_ontology
|def="An organ system cancer that is located_in the skin, hair and nails." [url:http://en.wikipedia.org/wiki/Integumentary_system]
|xref=
|is_a=DOID:0050686
|synonym=
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=lschriml
|created_by=lschriml
|obo_creation_date=2011-07-27T02:31:34Z
|def="An organ system cancer that is located_in the skin, hair and nails." [url:http://en.wikipedia.org/wiki/Integumentary_system]
|subset=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=DOID:0060122
|is_a=DOID:0050686
|is_obsolete=
|located_in=
|located_in=
|name=integumentary system cancer
|namespace=disease_ontology
|obo_creation_date=2011-07-27T02:31:34Z
|part_of=
|part_of=
|preceded_by=
|property_value=IAO:0000412 file:/Users/cjm/Dropbox/fantom5/HumanDO.obo
|property_value=IAO:0000412 file:/Users/cjm/Dropbox/fantom5/HumanDO.obo
|is_obsolete=
|subset=
|preceded_by=
|synonym=
|union_of=
|xref=
}}
}}

Revision as of 10:32, 12 September 2014

Name:integumentary system cancer
Namespace:disease_ontology
Definition:"An organ system cancer that is located_in the skin, hair and nails." [url:http://en.wikipedia.org/wiki/Integumentary_system]
Created by:lschriml
Creation date:2011-07-27T02:31:34Z

Ontology association<br>Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:DOID:0050686(organ system cancer)



Children


is a:DOID:4159 (skin cancer)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples

Human (Homo sapiens)

Mouse (Mus musculus)

Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:0060122 (integumentary system cancer), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.55e-98FFCP PHASE2:Hg19::chr10:69686723..69686726,-#_5b017d91a5e6cd1dbe66a63b66369300p@chr10:69686723..69686726, -
1.55e-98FFCP PHASE1:Hg19::chr10:69686723..69686726,-#_5b017d91a5e6cd1dbe66a63b66369300p@chr10:69686723..69686726, -
4.52e-50FFCP PHASE2:Hg19::chr1:153431372..153431378,-#_5923a5f9732865decba8baf589b3a817p4@S100A7
4.52e-50FFCP PHASE2:Hg19::chr7:101448249..101448254,+#_5923a5f9732865decba8baf589b3a817p@chr7:101448249..101448254, +
4.52e-50FFCP PHASE1:Hg19::chr8:123875147..123875159,+#_5923a5f9732865decba8baf589b3a817p26@ZHX2
4.52e-50FFCP PHASE2:Hg19::chr7:101448277..101448287,+#_5923a5f9732865decba8baf589b3a817p@chr7:101448277..101448287, +
4.52e-50FFCP PHASE1:Hg19::chr7:101448249..101448254,+#_5923a5f9732865decba8baf589b3a817p@chr7:101448249..101448254, +
4.52e-50FFCP PHASE1:Hg19::chr1:153431372..153431378,-#_5923a5f9732865decba8baf589b3a817p4@S100A7
4.52e-50FFCP PHASE2:Hg19::chr7:101448101..101448113,+#_5923a5f9732865decba8baf589b3a817p@chr7:101448101..101448113, +
4.52e-50FFCP PHASE2:Hg19::chr18:22080172..22080183,+#_5923a5f9732865decba8baf589b3a817p@chr18:22080172..22080183, +
4.52e-50FFCP PHASE1:Hg19::chr7:101448277..101448287,+#_5923a5f9732865decba8baf589b3a817p@chr7:101448277..101448287, +
4.52e-50FFCP PHASE2:Hg19::chr7:101448176..101448184,+#_5923a5f9732865decba8baf589b3a817p@chr7:101448176..101448184, +
4.52e-50FFCP PHASE1:Hg19::chr18:22080172..22080183,+#_5923a5f9732865decba8baf589b3a817p@chr18:22080172..22080183, +
4.52e-50FFCP PHASE1:Hg19::chr7:101448101..101448113,+#_5923a5f9732865decba8baf589b3a817p@chr7:101448101..101448113, +
4.52e-50FFCP PHASE2:Hg19::chr8:123875147..123875159,+#_5923a5f9732865decba8baf589b3a817p26@ZHX2
4.52e-50FFCP PHASE1:Hg19::chr7:101448176..101448184,+#_5923a5f9732865decba8baf589b3a817p@chr7:101448176..101448184, +
3.61e-34FFCP PHASE2:Hg19::chr20:49047228..49047236,-#_7acafc11da4782e5e9715836c324279dp@chr20:49047228..49047236, -
3.61e-34FFCP PHASE1:Hg19::chr9:97563078..97563086,+#_7acafc11da4782e5e9715836c324279dp@chr9:97563078..97563086, +
3.61e-34FFCP PHASE1:Hg19::chr20:49047228..49047236,-#_7acafc11da4782e5e9715836c324279dp@chr20:49047228..49047236, -
3.61e-34FFCP PHASE2:Hg19::chr9:97563078..97563086,+#_7acafc11da4782e5e9715836c324279dp@chr9:97563078..97563086, +
5.04e-34FFCP PHASE1:Hg19::chr1:76127067..76127073,-#_40d7fcc94b1c41b294e2da822fcc33a5p@chr1:76127067..76127073, -
5.04e-34FFCP PHASE2:Hg19::chr3:81671636..81671662,-#_40d7fcc94b1c41b294e2da822fcc33a5p@chr3:81671636..81671662, -
5.04e-34FFCP PHASE2:Hg19::chr21:37376927..37376938,+#_40d7fcc94b1c41b294e2da822fcc33a5p@chr21:37376927..37376938, +
5.04e-34FFCP PHASE2:Hg19::chr1:76127067..76127073,-#_40d7fcc94b1c41b294e2da822fcc33a5p@chr1:76127067..76127073, -
5.04e-34FFCP PHASE2:Hg19::chr18:61254400..61254410,+#_40d7fcc94b1c41b294e2da822fcc33a5p8@SERPINB13
5.04e-34FFCP PHASE1:Hg19::chr21:37376927..37376938,+#_40d7fcc94b1c41b294e2da822fcc33a5p@chr21:37376927..37376938, +
5.04e-34FFCP PHASE1:Hg19::chr18:61254400..61254410,+#_40d7fcc94b1c41b294e2da822fcc33a5p8@SERPINB13
5.04e-34FFCP PHASE1:Hg19::chr3:81671636..81671662,-#_40d7fcc94b1c41b294e2da822fcc33a5p@chr3:81671636..81671662, -
5.04e-34FFCP PHASE2:Hg19::chr17:19648916..19648937,-#_40d7fcc94b1c41b294e2da822fcc33a5p10@ALDH3A1
5.04e-34FFCP PHASE1:Hg19::chr17:19648916..19648937,-#_40d7fcc94b1c41b294e2da822fcc33a5p10@ALDH3A1
7.05e-34FFCP PHASE2:Hg19::chr2:178179611..178179619,-#_3eaafc99add2ebdb423dfbd46783a7a5p4@ENST00000443132
7.05e-34FFCP PHASE2:Hg19::chr3:193809263..193809278,+#_3eaafc99add2ebdb423dfbd46783a7a5p1@ENST00000457815
7.05e-34FFCP PHASE1:Hg19::chr1:10980427..10980431,-#_3eaafc99add2ebdb423dfbd46783a7a5p@chr1:10980427..10980431, -
7.05e-34FFCP PHASE2:Hg19::chr13:28542963..28542973,-#_3eaafc99add2ebdb423dfbd46783a7a5p1@CU677005
7.05e-34FFCP PHASE2:Hg19::chr17:48072063..48072074,-#_3eaafc99add2ebdb423dfbd46783a7a5p5@DLX3
7.05e-34FFCP PHASE2:Hg19::chr1:18085798..18085805,+#_3eaafc99add2ebdb423dfbd46783a7a5p@chr1:18085798..18085805, +
7.05e-34FFCP PHASE1:Hg19::chr19:51517875..51517889,-#_3eaafc99add2ebdb423dfbd46783a7a5p3@AK026045
7.05e-34FFCP PHASE1:Hg19::chr2:178179611..178179619,-#_3eaafc99add2ebdb423dfbd46783a7a5p4@ENST00000443132
7.05e-34FFCP PHASE1:Hg19::chr13:28542963..28542973,-#_3eaafc99add2ebdb423dfbd46783a7a5p1@CU677005
7.05e-34FFCP PHASE1:Hg19::chr17:48072063..48072074,-#_3eaafc99add2ebdb423dfbd46783a7a5p5@DLX3
7.05e-34FFCP PHASE2:Hg19::chr3:177508111..177508119,-#_3eaafc99add2ebdb423dfbd46783a7a5p@chr3:177508111..177508119, -
7.05e-34FFCP PHASE1:Hg19::chr3:193809263..193809278,+#_3eaafc99add2ebdb423dfbd46783a7a5p1@ENST00000457815
7.05e-34FFCP PHASE2:Hg19::chr1:10980427..10980431,-#_3eaafc99add2ebdb423dfbd46783a7a5p@chr1:10980427..10980431, -
7.05e-34FFCP PHASE1:Hg19::chr11:101454246..101454255,-#_3eaafc99add2ebdb423dfbd46783a7a5p11@TRPC6
7.05e-34FFCP PHASE1:Hg19::chr1:18085798..18085805,+#_3eaafc99add2ebdb423dfbd46783a7a5p@chr1:18085798..18085805, +
7.05e-34FFCP PHASE2:Hg19::chr19:51517875..51517889,-#_3eaafc99add2ebdb423dfbd46783a7a5p3@AK026045
7.05e-34FFCP PHASE1:Hg19::chr3:177508111..177508119,-#_3eaafc99add2ebdb423dfbd46783a7a5p@chr3:177508111..177508119, -
7.05e-34FFCP PHASE2:Hg19::chr11:101454246..101454255,-#_3eaafc99add2ebdb423dfbd46783a7a5p11@TRPC6
4.32e-26FFCP PHASE1:Hg19::chr1:151826151..151826159,-#_15f0ca921fd4e885a57650412e3f3b3ap3@THEM5
4.32e-26FFCP PHASE1:Hg19::chr5:1884077..1884085,+#_15f0ca921fd4e885a57650412e3f3b3ap1@ENST00000506335
4.32e-26FFCP PHASE2:Hg19::chr4:73248974..73249005,+#_15f0ca921fd4e885a57650412e3f3b3ap@chr4:73248974..73249005, +
4.32e-26FFCP PHASE2:Hg19::chr16:55600644..55600645,+#_15f0ca921fd4e885a57650412e3f3b3ap2@CAPNS2
4.32e-26FFCP PHASE2:Hg19::chr1:151826151..151826159,-#_15f0ca921fd4e885a57650412e3f3b3ap3@THEM5
4.32e-26FFCP PHASE1:Hg19::chr16:55600644..55600645,+#_15f0ca921fd4e885a57650412e3f3b3ap2@CAPNS2
4.32e-26FFCP PHASE1:Hg19::chr4:73248974..73249005,+#_15f0ca921fd4e885a57650412e3f3b3ap@chr4:73248974..73249005, +
4.32e-26FFCP PHASE2:Hg19::chr5:1884077..1884085,+#_15f0ca921fd4e885a57650412e3f3b3ap1@ENST00000506335
5.56e-26FFCP PHASE1:Hg19::chr8:123875131..123875140,+#_a5b7c8ece6a70a1a259fa4d239d218cap25@ZHX2
5.56e-26FFCP PHASE1:Hg19::chr1:86921028..86921032,+#_a5b7c8ece6a70a1a259fa4d239d218cap@chr1:86921028..86921032, +
5.56e-26FFCP PHASE2:Hg19::chr17:77774350..77774360,+#_a5b7c8ece6a70a1a259fa4d239d218cap@chr17:77774350..77774360, +
5.56e-26FFCP PHASE1:Hg19::chr7:101448204..101448229,+#_a5b7c8ece6a70a1a259fa4d239d218cap@chr7:101448204..101448229, +
5.56e-26FFCP PHASE1:Hg19::chr17:77774350..77774360,+#_a5b7c8ece6a70a1a259fa4d239d218cap@chr17:77774350..77774360, +
5.56e-26FFCP PHASE1:Hg19::chr3:50367252..50367278,-#_a5b7c8ece6a70a1a259fa4d239d218cap@chr3:50367252..50367278, -
5.56e-26FFCP PHASE1:Hg19::chr8:120233966..120233975,+#_a5b7c8ece6a70a1a259fa4d239d218cap@chr8:120233966..120233975, +
5.56e-26FFCP PHASE1:Hg19::chr12:130647145..130647153,+#_a5b7c8ece6a70a1a259fa4d239d218cap3@FZD10
5.56e-26FFCP PHASE2:Hg19::chr16:66906996..66906997,-#_a5b7c8ece6a70a1a259fa4d239d218cap@chr16:66906996..66906997, -
5.56e-26FFCP PHASE2:Hg19::chr8:123875131..123875140,+#_a5b7c8ece6a70a1a259fa4d239d218cap25@ZHX2
5.56e-26FFCP PHASE2:Hg19::chr6:152792772..152792787,-#_a5b7c8ece6a70a1a259fa4d239d218cap@chr6:152792772..152792787, -
5.56e-26FFCP PHASE1:Hg19::chr16:66906996..66906997,-#_a5b7c8ece6a70a1a259fa4d239d218cap@chr16:66906996..66906997, -
5.56e-26FFCP PHASE2:Hg19::chr12:130647145..130647153,+#_a5b7c8ece6a70a1a259fa4d239d218cap3@FZD10
5.56e-26FFCP PHASE2:Hg19::chr1:86921028..86921032,+#_a5b7c8ece6a70a1a259fa4d239d218cap@chr1:86921028..86921032, +
5.56e-26FFCP PHASE2:Hg19::chr7:101448204..101448229,+#_a5b7c8ece6a70a1a259fa4d239d218cap@chr7:101448204..101448229, +
5.56e-26FFCP PHASE1:Hg19::chr6:152792772..152792787,-#_a5b7c8ece6a70a1a259fa4d239d218cap@chr6:152792772..152792787, -
5.56e-26FFCP PHASE2:Hg19::chr3:50367252..50367278,-#_a5b7c8ece6a70a1a259fa4d239d218cap@chr3:50367252..50367278, -
5.56e-26FFCP PHASE2:Hg19::chr8:120233966..120233975,+#_a5b7c8ece6a70a1a259fa4d239d218cap@chr8:120233966..120233975, +
7.14e-26FFCP PHASE2:Hg19::chr2:234526341..234526346,+#_5ffbdc31468d1e3b405b1a749ccfa465p1@UGT1A8
7.14e-26FFCP PHASE1:Hg19::chr2:234526341..234526346,+#_5ffbdc31468d1e3b405b1a749ccfa465p1@UGT1A8
9.18e-26FFCP PHASE2:Hg19::chr10:127591699..127591713,-#_7d18e78197e96ecd6fa225c991e729cdp@chr10:127591699..127591713, -
9.18e-26FFCP PHASE2:Hg19::chr10:92754303..92754313,+#_7d18e78197e96ecd6fa225c991e729cdp2@ENST00000412362
9.18e-26FFCP PHASE1:Hg19::chr3:136885144..136885147,+#_7d18e78197e96ecd6fa225c991e729cdp@chr3:136885144..136885147, +
9.18e-26FFCP PHASE1:Hg19::chr14:65406349..65406358,+#_7d18e78197e96ecd6fa225c991e729cdp@chr14:65406349..65406358, +
9.18e-26FFCP PHASE1:Hg19::chr1:153430422..153430443,-#_7d18e78197e96ecd6fa225c991e729cdp3@S100A7
9.18e-26FFCP PHASE1:Hg19::chr4:152117165..152117168,+#_7d18e78197e96ecd6fa225c991e729cdp@chr4:152117165..152117168, +
9.18e-26FFCP PHASE2:Hg19::chr1:118570948..118570964,-#_7d18e78197e96ecd6fa225c991e729cdp@chr1:118570948..118570964, -
9.18e-26FFCP PHASE1:Hg19::chr5:14437967..14437970,+#_7d18e78197e96ecd6fa225c991e729cdp@chr5:14437967..14437970, +
9.18e-26FFCP PHASE1:Hg19::chr10:54259346..54259353,+#_7d18e78197e96ecd6fa225c991e729cdp@chr10:54259346..54259353, +
9.18e-26FFCP PHASE2:Hg19::chr3:136885144..136885147,+#_7d18e78197e96ecd6fa225c991e729cdp@chr3:136885144..136885147, +
9.18e-26FFCP PHASE1:Hg19::chr1:118570948..118570964,-#_7d18e78197e96ecd6fa225c991e729cdp@chr1:118570948..118570964, -
9.18e-26FFCP PHASE2:Hg19::chr4:152117165..152117168,+#_7d18e78197e96ecd6fa225c991e729cdp@chr4:152117165..152117168, +
9.18e-26FFCP PHASE2:Hg19::chr1:153430422..153430443,-#_7d18e78197e96ecd6fa225c991e729cdp3@S100A7
9.18e-26FFCP PHASE1:Hg19::chr10:127591699..127591713,-#_7d18e78197e96ecd6fa225c991e729cdp@chr10:127591699..127591713, -
9.18e-26FFCP PHASE1:Hg19::chr10:92754303..92754313,+#_7d18e78197e96ecd6fa225c991e729cdp2@ENST00000412362
9.18e-26FFCP PHASE2:Hg19::chr10:54259346..54259353,+#_7d18e78197e96ecd6fa225c991e729cdp@chr10:54259346..54259353, +
9.18e-26FFCP PHASE2:Hg19::chr5:14437967..14437970,+#_7d18e78197e96ecd6fa225c991e729cdp@chr5:14437967..14437970, +
9.18e-26FFCP PHASE2:Hg19::chr14:65406349..65406358,+#_7d18e78197e96ecd6fa225c991e729cdp@chr14:65406349..65406358, +
3.11e-21FFCP PHASE1:Hg19::chr17:39674844..39674854,+#_2b195d7050a647735a96fa1fca53f253p@chr17:39674844..39674854, +
3.11e-21FFCP PHASE1:Hg19::chr4:75180763..75180777,+#_2b195d7050a647735a96fa1fca53f253p@chr4:75180763..75180777, +
3.11e-21FFCP PHASE2:Hg19::chr1:152572708..152572714,+#_2b195d7050a647735a96fa1fca53f253p1@LCE3C
3.11e-21FFCP PHASE2:Hg19::chr5:11385573..11385583,-#_2b195d7050a647735a96fa1fca53f253p47@CTNND2
3.11e-21FFCP PHASE1:Hg19::chr6:132455433..132455444,+#_2b195d7050a647735a96fa1fca53f253p4@ENST00000443303
3.11e-21FFCP PHASE1:Hg19::chr10:5567644..5567657,+#_2b195d7050a647735a96fa1fca53f253p@chr10:5567644..5567657, +

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