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DOID:403: Difference between revisions

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{{DOID
{{DOID
|id=DOID:403
|alt_id=
|name=mouth disease
|namespace=disease_ontology
|def=
|xref=MSH:D009059;;NCI:C27641;;NCI:C3240;;SNOMEDCT_2010_1_31:118938008;;SNOMEDCT_2010_1_31:155630004;;SNOMEDCT_2010_1_31:266484002;;UMLS_CUI:C0026636
|is_a=DOID:77
|synonym=
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def=
|subset=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=DOID:403
|is_a=DOID:77
|is_obsolete=
|located_in=
|located_in=
|name=mouth disease
|namespace=disease_ontology
|obo_creation_date=
|part_of=
|part_of=
|preceded_by=
|property_value=IAO:0000412 file:/Users/cjm/Dropbox/fantom5/HumanDO.obo
|property_value=IAO:0000412 file:/Users/cjm/Dropbox/fantom5/HumanDO.obo
|is_obsolete=
|subset=
|preceded_by=
|synonym=
|union_of=
|xref=MSH:D009059;;NCI:C27641;;NCI:C3240;;SNOMEDCT_2010_1_31:118938008;;SNOMEDCT_2010_1_31:155630004;;SNOMEDCT_2010_1_31:266484002;;UMLS_CUI:C0026636
}}
}}

Revision as of 10:35, 12 September 2014

Name:mouth disease
Namespace:disease_ontology
Xrefs:
links:

MSH:D009059
NCI:C27641
NCI:C3240
SNOMEDCT_2010_1_31:118938008
SNOMEDCT_2010_1_31:155630004
SNOMEDCT_2010_1_31:266484002

UMLS_CUI:C0026636

Ontology association<br>Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:DOID:77(gastrointestinal system disease)



Children


is a:DOID:1091 (tooth disease)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples

Human (Homo sapiens)

  • 11921-125H4 (Fibroblast - Gingival, donor6 (aggressive periodontitis))
  • 11923-125H6 (Fibroblast - Gingival, donor7 (aggressive periodontitis))
  • 11925-125H8 (Fibroblast - Gingival, donor8 (chronic periodontitis))
  • 11928-125I2 (Fibroblast - Gingival, donor10 (periodontitis))

Mouse (Mus musculus)

  • 11921-125H4 (Fibroblast - Gingival, donor6 (aggressive periodontitis))
  • 11923-125H6 (Fibroblast - Gingival, donor7 (aggressive periodontitis))
  • 11925-125H8 (Fibroblast - Gingival, donor8 (chronic periodontitis))
  • 11928-125I2 (Fibroblast - Gingival, donor10 (periodontitis))

Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:403 (mouth disease), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data


No analysis results