UBERON:0000165: Difference between revisions
From FANTOM5_SSTAR
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|has_quality= | |has_quality= | ||
|id=UBERON:0000165 | |id=UBERON:0000165 | ||
|is_a=UBERON: | |is_a=UBERON:0004906 | ||
|is_obsolete= | |is_obsolete= | ||
|located_in= | |located_in= | ||
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|namespace= | |namespace= | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of=UBERON: | |part_of=UBERON:0000033 | ||
|preceded_by= | |preceded_by= | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl;;UBPROP:0000001 "Cavity in which food is initially ingested and generally contains teeth, tongue and glands.[AAO]" xsd:string | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl;;UBPROP:0000001 "Cavity in which food is initially ingested and generally contains teeth, tongue and glands.[AAO]" xsd:string | ||
Revision as of 10:52, 12 September 2014
| Name: | mouth | ||
|---|---|---|---|
| Definition: | "First portion of the digestive tract[WP]. The portion of the digestive that develops from the stomodeum" [Wikipedia:Mouth] | ||
| Xrefs: |
| ||
| Synonyms: |
"adult mouth" EXACT [] "cavitas oris" RELATED [BTO:0001090] "cavum oris" RELATED [BTO:0001090] "mouth cavity" RELATED [BTO:0001090] "oral vestibule" RELATED [BTO:0001090] "os, cavital oralis" RELATED LATIN [Wikipedia:Mouth] "regio oralis" EXACT [FMA:49184, FMA:TA] "rima oris" RELATED [BTO:0001090] "stoma" RELATED [] "vestibule of mouth" RELATED [BTO:0001090] "vestibulum oris" RELATED [BTO:0001090] | ||
| Comments: | TODO - check fly mouthpart. note in uberon we distinguish between the mouth and the oral opening. the mouth is part of the digestive tract. TODO - check isa parent subdivision of head - is it a subdivision of the head or digestive tract | ||
| Subset: |
major_organ uberon_slim vertebrate_core |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0004906(ectodermal part of digestive tract) |
|---|---|
| develops_from: | UBERON:0000930(stomodeum) |
| part_of: | UBERON:0000033(head) |
Children
| part of: | UBERON:0000166 (oral opening),UBERON:0000167 (oral cavity),UBERON:0001723 (tongue),UBERON:0003729 (mouth mucosa),UBERON:0010047 (oral gland),UBERON:0010056 (future tongue),UBERON:0011595 (jaw region) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10047-101G2 (tonsil, adult, pool1)
- 10059-101H5 (tongue, fetal, donor1)
- 10093-102C3 (salivary gland, adult, pool1)
- 10199-103F1 (parotid gland, adult)
- 10202-103F4 (submaxillary gland, adult)
- 10203-103F5 (tongue, adult)
- 10288-104F9 (tongue epidermis (fungiform papillae), donor1)
- 10289-104G1
- 10316-105A1
- 10317-105A2
... further results Mouse (Mus musculus)
- 10047-101G2 (tonsil, adult, pool1)
- 10059-101H5 (tongue, fetal, donor1)
- 10093-102C3 (salivary gland, adult, pool1)
- 10199-103F1 (parotid gland, adult)
- 10202-103F4 (submaxillary gland, adult)
- 10203-103F5 (tongue, adult)
- 10288-104F9 (tongue epidermis (fungiform papillae), donor1)
- 10289-104G1
- 10316-105A1
- 10317-105A2
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0000165 (mouth), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 1.87e-86 | FFCP PHASE1:Mm9::chr15:91668686..91668696,+#_0dd8fdab0a69022d45c6f6588bc56faa | p2@Smgc |
| 1.87e-86 | FFCP PHASE2:Mm9::chr15:91729805..91729815,+#_0dd8fdab0a69022d45c6f6588bc56faa | p@chr15:91729805..91729815, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr12:57793900..57793908,-#_0dd8fdab0a69022d45c6f6588bc56faa | p@chr12:57793900..57793908, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr15:91729805..91729815,+#_0dd8fdab0a69022d45c6f6588bc56faa | p@chr15:91729805..91729815, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr15:91668686..91668696,+#_0dd8fdab0a69022d45c6f6588bc56faa | p2@Smgc |
| 1.87e-86 | FFCP PHASE1:Mm9::chr12:57793900..57793908,-#_0dd8fdab0a69022d45c6f6588bc56faa | p@chr12:57793900..57793908, - |
| 2.11e-67 | FFCP PHASE2:Hg19::chr1:75599672..75599682,-#_80b66d9b90a70e2587ed48842c1fc718 | p@chr1:75599672..75599682, - |
| 2.11e-67 | FFCP PHASE1:Hg19::chr1:75599672..75599682,-#_80b66d9b90a70e2587ed48842c1fc718 | p@chr1:75599672..75599682, - |
| 2.86e-62 | FFCP PHASE2:Hg19::chr1:75598362..75598407,-#_4c1a9c3b1afb92a307db23216c23894e | p1@ENST00000427892, p1@uc001dgp.1 |
| 2.86e-62 | FFCP PHASE1:Hg19::chr1:75598362..75598407,-#_4c1a9c3b1afb92a307db23216c23894e | p1@ENST00000427892, p1@uc001dgp.1 |
| 7.26e-62 | FFCP PHASE1:Hg19::chr14:37126765..37126799,+#_b922ef059448ef381eea81dd250ab289 | p2@PAX9 |
| 7.26e-62 | FFCP PHASE2:Hg19::chr14:37126765..37126799,+#_b922ef059448ef381eea81dd250ab289 | p2@PAX9 |
| 1.17e-59 | FFCP PHASE2:Hg19::chr1:75599683..75599699,-#_ca56e14ab8a31406db12314adbf85377 | p@chr1:75599683..75599699, - |
| 1.17e-59 | FFCP PHASE1:Hg19::chr1:75599683..75599699,-#_ca56e14ab8a31406db12314adbf85377 | p@chr1:75599683..75599699, - |
| 1.68e-58 | FFCP PHASE2:Mm9::chr6:60435965..60435986,+#_b2e5d771e0b6e0a98c0e8ecc050ff0bc | p@chr6:60435965..60435986, + |
| 1.68e-58 | FFCP PHASE1:Mm9::chr6:60435965..60435986,+#_b2e5d771e0b6e0a98c0e8ecc050ff0bc | p@chr6:60435965..60435986, + |
| 1.68e-58 | FFCP PHASE1:Mm9::chr10:28755265..28755269,-#_b2e5d771e0b6e0a98c0e8ecc050ff0bc | p@chr10:28755265..28755269, - |
| 1.68e-58 | FFCP PHASE2:Mm9::chr1:52741574..52741579,+#_b2e5d771e0b6e0a98c0e8ecc050ff0bc | p@chr1:52741574..52741579, + |
| 1.68e-58 | FFCP PHASE1:Mm9::chr7:51271323..51271366,+#_b2e5d771e0b6e0a98c0e8ecc050ff0bc | p@chr7:51271323..51271366, + |
| 1.68e-58 | FFCP PHASE2:Mm9::chr10:28755265..28755269,-#_b2e5d771e0b6e0a98c0e8ecc050ff0bc | p@chr10:28755265..28755269, - |
| 1.68e-58 | FFCP PHASE2:Mm9::chr7:51271323..51271366,+#_b2e5d771e0b6e0a98c0e8ecc050ff0bc | p@chr7:51271323..51271366, + |
| 1.68e-58 | FFCP PHASE1:Mm9::chr1:52741574..52741579,+#_b2e5d771e0b6e0a98c0e8ecc050ff0bc | p@chr1:52741574..52741579, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr10:28693770..28693774,-#_8bee0c0d830542a1f85aa9f12d25b99d | p5@2310057J18Rik |
| 3.28e-58 | FFCP PHASE1:Mm9::chr2:153837176..153837187,+#_8bee0c0d830542a1f85aa9f12d25b99d | p@chr2:153837176..153837187, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr2:153839410..153839423,+#_8bee0c0d830542a1f85aa9f12d25b99d | p6@Bpifa2e |
| 3.28e-58 | FFCP PHASE1:Mm9::chr10:28693770..28693774,-#_8bee0c0d830542a1f85aa9f12d25b99d | p5@2310057J18Rik |
| 3.28e-58 | FFCP PHASE1:Mm9::chr6:132314147..132314153,-#_8bee0c0d830542a1f85aa9f12d25b99d | p1@Gm4736, p1@Gm8882 |
| 3.28e-58 | FFCP PHASE1:Mm9::chr2:153839410..153839423,+#_8bee0c0d830542a1f85aa9f12d25b99d | p6@Bpifa2e |
| 3.28e-58 | FFCP PHASE2:Mm9::chr2:153840649..153840658,+#_8bee0c0d830542a1f85aa9f12d25b99d | p8@Bpifa2e |
| 3.28e-58 | FFCP PHASE2:Mm9::chr2:153837176..153837187,+#_8bee0c0d830542a1f85aa9f12d25b99d | p@chr2:153837176..153837187, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr6:132314147..132314153,-#_8bee0c0d830542a1f85aa9f12d25b99d | p1@Gm4736, p1@Gm8882 |
| 3.28e-58 | FFCP PHASE1:Mm9::chr2:153840649..153840658,+#_8bee0c0d830542a1f85aa9f12d25b99d | p8@Bpifa2e |
| 3.3e-50 | FFCP PHASE1:Hg19::chr1:75600067..75600094,+#_c2a068ebb43ab58bde77855be4cd2e55 | p2@LHX8 |
| 3.3e-50 | FFCP PHASE2:Hg19::chr1:75600067..75600094,+#_c2a068ebb43ab58bde77855be4cd2e55 | p2@LHX8 |
| 1.66e-44 | FFCP PHASE2:Mm9::chr10:28706137..28706150,-#_41d3b82e0b80d56d888cc9450fd6bb04 | p3@2310057J18Rik |
| 1.66e-44 | FFCP PHASE1:Mm9::chr10:28706137..28706150,-#_41d3b82e0b80d56d888cc9450fd6bb04 | p3@2310057J18Rik |
| 1.66e-44 | FFCP PHASE2:Mm9::chr15:91736964..91737001,+#_41d3b82e0b80d56d888cc9450fd6bb04 | p@chr15:91736964..91737001, + |
| 1.66e-44 | FFCP PHASE1:Mm9::chr15:91736964..91737001,+#_41d3b82e0b80d56d888cc9450fd6bb04 | p@chr15:91736964..91737001, + |
| 2.07e-44 | FFCP PHASE1:Hg19::chr14:37126870..37126882,+#_e1586ed3b90b8cf88b9280e35c0e5a12 | p1@ENST00000555639 |
| 2.07e-44 | FFCP PHASE2:Hg19::chr14:37126870..37126882,+#_e1586ed3b90b8cf88b9280e35c0e5a12 | p1@ENST00000555639 |
| 2.75e-44 | FFCP PHASE1:Mm9::chr2:153833963..153833980,+#_90dc0aad7fc31b2ad46c5eef14e92f2b | p5@Bpifa2e |
| 2.75e-44 | FFCP PHASE2:Mm9::chr2:153835527..153835537,+#_90dc0aad7fc31b2ad46c5eef14e92f2b | p@chr2:153835527..153835537, + |
| 2.75e-44 | FFCP PHASE1:Mm9::chr2:153835527..153835537,+#_90dc0aad7fc31b2ad46c5eef14e92f2b | p@chr2:153835527..153835537, + |
| 2.75e-44 | FFCP PHASE2:Mm9::chr2:153833963..153833980,+#_90dc0aad7fc31b2ad46c5eef14e92f2b | p5@Bpifa2e |
| 4.52e-44 | FFCP PHASE2:Mm9::chr7:51360938..51360948,+#_6aea705790a53b011487476086a211ff | p@chr7:51360938..51360948, + |
| 4.52e-44 | FFCP PHASE1:Mm9::chr5:64359159..64359160,+#_6aea705790a53b011487476086a211ff | p@chr5:64359159..64359160, + |
| 4.52e-44 | FFCP PHASE2:Mm9::chr19:34051208..34051222,+#_6aea705790a53b011487476086a211ff | p@chr19:34051208..34051222, + |
| 4.52e-44 | FFCP PHASE1:Mm9::chr3:102324178..102324186,+#_6aea705790a53b011487476086a211ff | p@chr3:102324178..102324186, + |
| 4.52e-44 | FFCP PHASE1:Mm9::chr17:10497339..10497341,+#_6aea705790a53b011487476086a211ff | p@chr17:10497339..10497341, + |
| 4.52e-44 | FFCP PHASE2:Mm9::chr3:129457867..129457873,-#_6aea705790a53b011487476086a211ff | p@chr3:129457867..129457873, - |
| 4.52e-44 | FFCP PHASE1:Mm9::chr3:129460833..129460843,+#_6aea705790a53b011487476086a211ff | p@chr3:129460833..129460843, + |
| 4.52e-44 | FFCP PHASE2:Mm9::chr19:34043253..34043264,+#_6aea705790a53b011487476086a211ff | p@chr19:34043253..34043264, + |
| 4.52e-44 | FFCP PHASE1:Mm9::chrX:33421414..33421418,-#_6aea705790a53b011487476086a211ff | p@chrX:33421414..33421418, - |
| 4.52e-44 | FFCP PHASE1:Mm9::chr5:88757066..88757071,-#_6aea705790a53b011487476086a211ff | p@chr5:88757066..88757071, - |
| 4.52e-44 | FFCP PHASE1:Mm9::chr4:149571419..149571431,+#_6aea705790a53b011487476086a211ff | p@chr4:149571419..149571431, + |
| 4.52e-44 | FFCP PHASE1:Mm9::chr1:135228845..135228847,-#_6aea705790a53b011487476086a211ff | p@chr1:135228845..135228847, - |
| 4.52e-44 | FFCP PHASE1:Mm9::chr1:36297930..36297934,-#_6aea705790a53b011487476086a211ff | p@chr1:36297930..36297934, - |
| 4.52e-44 | FFCP PHASE1:Mm9::chr7:51268024..51268029,+#_6aea705790a53b011487476086a211ff | p2@Egfbp2, p2@Klk1b26 |
| 4.52e-44 | FFCP PHASE1:Mm9::chr19:34039335..34039345,+#_6aea705790a53b011487476086a211ff | p@chr19:34039335..34039345, + |
| 4.52e-44 | FFCP PHASE2:Mm9::chr17:40359284..40359293,-#_6aea705790a53b011487476086a211ff | p@chr17:40359284..40359293, - |
| 4.52e-44 | FFCP PHASE2:Mm9::chr2:153700714..153700723,+#_6aea705790a53b011487476086a211ff | p2@Bpifb2 |
| 4.52e-44 | FFCP PHASE2:Mm9::chr18:70435860..70435867,-#_6aea705790a53b011487476086a211ff | p@chr18:70435860..70435867, - |
| 4.52e-44 | FFCP PHASE2:Mm9::chr5:37878237..37878242,+#_6aea705790a53b011487476086a211ff | p@chr5:37878237..37878242, + |
| 4.52e-44 | FFCP PHASE1:Mm9::chr13:112978961..112978966,+#_6aea705790a53b011487476086a211ff | p@chr13:112978961..112978966, + |
| 4.52e-44 | FFCP PHASE2:Mm9::chrX:33421414..33421418,-#_6aea705790a53b011487476086a211ff | p@chrX:33421414..33421418, - |
| 4.52e-44 | FFCP PHASE1:Mm9::chr6:127527955..127527956,+#_6aea705790a53b011487476086a211ff | p6@Efcab4b |
| 4.52e-44 | FFCP PHASE2:Mm9::chr7:51377618..51377628,+#_6aea705790a53b011487476086a211ff | p@chr7:51377618..51377628, + |
| 4.52e-44 | FFCP PHASE1:Mm9::chr9:61048186..61048188,+#_6aea705790a53b011487476086a211ff | p@chr9:61048186..61048188, + |
| 4.52e-44 | FFCP PHASE1:Mm9::chr7:51464968..51464982,+#_6aea705790a53b011487476086a211ff | p@chr7:51464968..51464982, + |
| 4.52e-44 | FFCP PHASE2:Mm9::chr11:99946757..99946762,-#_6aea705790a53b011487476086a211ff | p4@Krt32 |
| 4.52e-44 | FFCP PHASE1:Mm9::chr2:129870352..129870357,+#_6aea705790a53b011487476086a211ff | p@chr2:129870352..129870357, + |
| 4.52e-44 | FFCP PHASE2:Mm9::chr7:51225424..51225450,+#_6aea705790a53b011487476086a211ff | p@chr7:51225424..51225450, + |
| 4.52e-44 | FFCP PHASE1:Mm9::chr1:16804378..16804385,+#_6aea705790a53b011487476086a211ff | p@chr1:16804378..16804385, + |
| 4.52e-44 | FFCP PHASE2:Mm9::chr1:16804330..16804337,+#_6aea705790a53b011487476086a211ff | p@chr1:16804330..16804337, + |
| 4.52e-44 | FFCP PHASE1:Mm9::chr7:51234512..51234517,+#_6aea705790a53b011487476086a211ff | p@chr7:51234512..51234517, + |
| 4.52e-44 | FFCP PHASE1:Mm9::chr7:51361022..51361029,-#_6aea705790a53b011487476086a211ff | p@chr7:51361022..51361029, - |
| 4.52e-44 | FFCP PHASE2:Mm9::chr19:34045308..34045320,+#_6aea705790a53b011487476086a211ff | p@chr19:34045308..34045320, + |
| 4.52e-44 | FFCP PHASE1:Mm9::chr17:40367824..40367826,-#_6aea705790a53b011487476086a211ff | p@chr17:40367824..40367826, - |
| 4.52e-44 | FFCP PHASE1:Mm9::chr2:19468928..19468929,-#_6aea705790a53b011487476086a211ff | p@chr2:19468928..19468929, - |
| 4.52e-44 | FFCP PHASE2:Mm9::chr6:93765798..93765806,-#_6aea705790a53b011487476086a211ff | p@chr6:93765798..93765806, - |
| 4.52e-44 | FFCP PHASE1:Mm9::chr8:27934890..27934902,-#_6aea705790a53b011487476086a211ff | p@chr8:27934890..27934902, - |
| 4.52e-44 | FFCP PHASE1:Mm9::chr7:149031277..149031282,+#_6aea705790a53b011487476086a211ff | p@chr7:149031277..149031282, + |
| 4.52e-44 | FFCP PHASE2:Mm9::chr9:61048186..61048188,+#_6aea705790a53b011487476086a211ff | p@chr9:61048186..61048188, + |
| 4.52e-44 | FFCP PHASE2:Mm9::chr3:129381353..129381363,-#_6aea705790a53b011487476086a211ff | p@chr3:129381353..129381363, - |
| 4.52e-44 | FFCP PHASE1:Mm9::chr7:51271475..51271500,-#_6aea705790a53b011487476086a211ff | p@chr7:51271475..51271500, - |
| 4.52e-44 | FFCP PHASE1:Mm9::chr3:129429207..129429210,-#_6aea705790a53b011487476086a211ff | p@chr3:129429207..129429210, - |
| 4.52e-44 | FFCP PHASE1:Mm9::chr19:34045308..34045320,+#_6aea705790a53b011487476086a211ff | p@chr19:34045308..34045320, + |
| 4.52e-44 | FFCP PHASE2:Mm9::chr12:95890336..95890340,-#_6aea705790a53b011487476086a211ff | p@chr12:95890336..95890340, - |
| 4.52e-44 | FFCP PHASE2:Mm9::chr17:24090258..24090267,+#_6aea705790a53b011487476086a211ff | p@chr17:24090258..24090267, + |
| 4.52e-44 | FFCP PHASE1:Mm9::chr17:40379328..40379333,-#_6aea705790a53b011487476086a211ff | p2@Crisp3 |
| 4.52e-44 | FFCP PHASE2:Mm9::chr8:112138317..112138321,+#_6aea705790a53b011487476086a211ff | p2@Pkd1l3 |
| 4.52e-44 | FFCP PHASE1:Mm9::chr16:42166864..42166867,+#_6aea705790a53b011487476086a211ff | p@chr16:42166864..42166867, + |
| 4.52e-44 | FFCP PHASE1:Mm9::chr11:118524835..118524836,-#_6aea705790a53b011487476086a211ff | p@chr11:118524835..118524836, - |
| 4.52e-44 | FFCP PHASE1:Mm9::chr6:131787463..131787506,+#_6aea705790a53b011487476086a211ff | p@chr6:131787463..131787506, + |
| 4.52e-44 | FFCP PHASE1:Mm9::chr17:24092296..24092324,-#_6aea705790a53b011487476086a211ff | p2@Sbpl |
| 4.52e-44 | FFCP PHASE2:Mm9::chr3:102324178..102324186,+#_6aea705790a53b011487476086a211ff | p@chr3:102324178..102324186, + |
| 4.52e-44 | FFCP PHASE2:Mm9::chr4:132626792..132626797,-#_6aea705790a53b011487476086a211ff | p@chr4:132626792..132626797, - |
| 4.52e-44 | FFCP PHASE2:Mm9::chr18:70404072..70404082,-#_6aea705790a53b011487476086a211ff | p3@2310002L13Rik |
| 4.52e-44 | FFCP PHASE1:Mm9::chr12:95890336..95890340,-#_6aea705790a53b011487476086a211ff | p@chr12:95890336..95890340, - |
| 4.52e-44 | FFCP PHASE2:Mm9::chr2:164015333..164015336,+#_6aea705790a53b011487476086a211ff | p@chr2:164015333..164015336, + |
Property "Property value" (as page type) with input value "UBPROP:0000001 "Cavity in which food is initially ingested and generally contains teeth, tongue and glands.[AAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
