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{{UBERON
{{UBERON
|id=UBERON:0003060
|alt_id=UBERON:XAO_0000063-ZFA_0000150
|name=pronephric duct
|namespace=
|def="In mammals, the pronephric duct is the predecessor of the Wolffian duct[WP]." [Wikipedia:Pronephric_duct]
|xref=AAO:0011088;;ncithesaurus:Pronephric_Duct;;SCTID:361406002;;TAO:0000150;;VHOG:0000082;;XAO:0000063;;ZFA:0000150
|is_a=UBERON:0004120;;UBERON:0009201
|synonym="archinephric duct" RELATED [VHOG:0000082];;"ductus pronephricus" RELATED LATIN [Wikipedia:Pronephric_duct]
|comment=
|comment=
|alt_id=UBERON:XAO_0000063-ZFA_0000150
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="In mammals, the pronephric duct is the predecessor of the Wolffian duct[WP]." [Wikipedia:Pronephric_duct]
|subset=uberon_slim
|derives_from=
|derives_from=
|develops_from=UBERON:0003064;;UBERON:0005721
|develops_from=UBERON:0003064;;UBERON:0005721
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0003060
|is_a=UBERON:0009201 ;;UBERON:0012275
|is_obsolete=
|located_in=
|located_in=
|name=pronephric duct
|namespace=
|obo_creation_date=
|part_of=UBERON:0002120
|part_of=UBERON:0002120
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl;;UBPROP:0000001 "Duct of the embryonic kidney, present bilaterally ventral to the somites and leading to the anal region where it empties separately from, and just posterior to the anus. Kimmel et al, 1995.[TAO]" xsd:string
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl;;UBPROP:0000001 "Duct of the embryonic kidney, present bilaterally ventral to the somites and leading to the anal region where it empties separately from, and just posterior to the anus. Kimmel et al, 1995.[TAO]" xsd:string
|is_obsolete=
|subset=uberon_slim
|preceded_by=
|synonym="archinephric duct" RELATED [VHOG:0000082];;"ductus pronephricus" RELATED LATIN [Wikipedia:Pronephric_duct]
|union_of=
|xref=AAO:0011088;;ncithesaurus:Pronephric_Duct;;SCTID:361406002;;TAO:0000150;;VHOG:0000082;;XAO:0000063;;ZFA:0000150
}}
}}

Revision as of 11:20, 12 September 2014

Name:pronephric duct
Definition:"In mammals, the pronephric duct is the predecessor of the Wolffian duct[WP]." [Wikipedia:Pronephric_duct]
Xrefs:
links:

AAO:0011088
ncithesaurus:Pronephric_Duct
SCTID:361406002
TAO:0000150
VHOG:0000082
XAO:0000063

ZFA:0000150
Synonyms: "archinephric duct" RELATED [VHOG:0000082]
"ductus pronephricus" RELATED LATIN [Wikipedia:Pronephric_duct]
Alt_id: UBERON:XAO_0000063-ZFA_0000150
Subset: uberon_slim

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0009201(nephric duct),UBERON:0012275(meso-epithelium)
develops_from:UBERON:0003064(intermediate mesoderm),UBERON:0005721(pronephric mesoderm)
part_of:UBERON:0002120(pronephros)



Children

develops from:UBERON:0003074 (mesonephric duct)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology



Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0003060 (pronephric duct), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.58e-86FFCP PHASE2:Mm9::chr18:44264202..44264213,+#_17f9453cc1074c62296fe60e07a39be4p4@Spink12
1.58e-86FFCP PHASE1:Mm9::chr18:44264202..44264213,+#_17f9453cc1074c62296fe60e07a39be4p4@Spink12
3.28e-58FFCP PHASE1:Mm9::chrX:156829476..156829504,+#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chrX:156829476..156829504, +
3.28e-58FFCP PHASE1:Mm9::chr9:35651788..35651804,-#_5ae5a5df85554ce46d6e6a24a59f6d3ep1@9230110F15Rik
3.28e-58FFCP PHASE2:Mm9::chrX:75798132..75798152,-#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chrX:75798132..75798152, -
3.28e-58FFCP PHASE2:Mm9::chr11:101958876..101958883,+#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr11:101958876..101958883, +
3.28e-58FFCP PHASE1:Mm9::chr11:59845404..59845416,-#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr11:59845404..59845416, -
3.28e-58FFCP PHASE1:Mm9::chr4:138824620..138824627,+#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr4:138824620..138824627, +
3.28e-58FFCP PHASE2:Mm9::chr16:22504758..22504766,-#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr16:22504758..22504766, -
3.28e-58FFCP PHASE2:Mm9::chr9:70761931..70761971,+#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr9:70761931..70761971, +
3.28e-58FFCP PHASE1:Mm9::chr13:21379125..21379144,-#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr13:21379125..21379144, -
3.28e-58FFCP PHASE2:Mm9::chr14:51677141..51677148,-#_5ae5a5df85554ce46d6e6a24a59f6d3ep7@Rnase12
3.28e-58FFCP PHASE1:Mm9::chrX:75798114..75798125,-#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chrX:75798114..75798125, -
3.28e-58FFCP PHASE2:Mm9::chrX:50280126..50280140,+#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chrX:50280126..50280140, +
3.28e-58FFCP PHASE1:Mm9::chr19:24582739..24582748,-#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr19:24582739..24582748, -
3.28e-58FFCP PHASE2:Mm9::chr7:151928014..151928021,+#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr7:151928014..151928021, +
3.28e-58FFCP PHASE1:Mm9::chr9:26688157..26688159,-#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr9:26688157..26688159, -
3.28e-58FFCP PHASE1:Mm9::chr5:100634942..100634968,+#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr5:100634942..100634968, +
3.28e-58FFCP PHASE2:Mm9::chr16:23308182..23308185,+#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr16:23308182..23308185, +
3.28e-58FFCP PHASE1:Mm9::chr4:106731469..106731481,-#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr4:106731469..106731481, -
3.28e-58FFCP PHASE2:Mm9::chr2:25678985..25679033,+#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr2:25678985..25679033, +
3.28e-58FFCP PHASE1:Mm9::chr12:16664775..16664784,+#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr12:16664775..16664784, +
3.28e-58FFCP PHASE2:Mm9::chr14:69143309..69143319,-#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr14:69143309..69143319, -
3.28e-58FFCP PHASE2:Mm9::chr1:168436322..168436326,-#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr1:168436322..168436326, -
3.28e-58FFCP PHASE2:Mm9::chr1:155697874..155697885,-#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr1:155697874..155697885, -
3.28e-58FFCP PHASE1:Mm9::chr11:53938008..53938022,+#_5ae5a5df85554ce46d6e6a24a59f6d3ep11@P4ha2
3.28e-58FFCP PHASE1:Mm9::chr10:61976287..61976297,-#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr10:61976287..61976297, -
3.28e-58FFCP PHASE1:Mm9::chr8:107073888..107073914,-#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr8:107073888..107073914, -
3.28e-58FFCP PHASE1:Mm9::chr13:21378871..21378901,-#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr13:21378871..21378901, -
3.28e-58FFCP PHASE2:Mm9::chr17:35249011..35249020,-#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr17:35249011..35249020, -
3.28e-58FFCP PHASE1:Mm9::chr2:152290340..152290344,-#_5ae5a5df85554ce46d6e6a24a59f6d3ep2@Defb23
3.28e-58FFCP PHASE1:Mm9::chr9:70779586..70779596,+#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr9:70779586..70779596, +
3.28e-58FFCP PHASE1:Mm9::chr9:26610184..26610191,-#_5ae5a5df85554ce46d6e6a24a59f6d3ep4@Glb1l2
3.28e-58FFCP PHASE1:Mm9::chr14:63630486..63630493,+#_5ae5a5df85554ce46d6e6a24a59f6d3ep5@Defb43
3.28e-58FFCP PHASE2:Mm9::chr9:26727675..26727681,-#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr9:26727675..26727681, -
3.28e-58FFCP PHASE1:Mm9::chr10:127470322..127470326,+#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr10:127470322..127470326, +
3.28e-58FFCP PHASE2:Mm9::chr2:164434157..164434162,-#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr2:164434157..164434162, -
3.28e-58FFCP PHASE2:Mm9::chr14:52608712..52608739,+#_5ae5a5df85554ce46d6e6a24a59f6d3ep11@Arhgef40
3.28e-58FFCP PHASE1:Mm9::chr12:110132148..110132154,+#_5ae5a5df85554ce46d6e6a24a59f6d3ep3@Wdr25
3.28e-58FFCP PHASE2:Mm9::chr12:110132148..110132154,+#_5ae5a5df85554ce46d6e6a24a59f6d3ep3@Wdr25
3.28e-58FFCP PHASE2:Mm9::chr14:63630486..63630493,+#_5ae5a5df85554ce46d6e6a24a59f6d3ep5@Defb43
3.28e-58FFCP PHASE1:Mm9::chr5:124447371..124447383,+#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr5:124447371..124447383, +
3.28e-58FFCP PHASE2:Mm9::chr18:46301295..46301302,-#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr18:46301295..46301302, -
3.28e-58FFCP PHASE1:Mm9::chr7:75293847..75293851,+#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr7:75293847..75293851, +
3.28e-58FFCP PHASE2:Mm9::chr1:90155722..90155743,+#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr1:90155722..90155743, +
3.28e-58FFCP PHASE1:Mm9::chr14:51627616..51627623,+#_5ae5a5df85554ce46d6e6a24a59f6d3ep2@Rnase10
3.28e-58FFCP PHASE2:Mm9::chr16:43230846..43230884,+#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr16:43230846..43230884, +
3.28e-58FFCP PHASE1:Mm9::chrX:20419453..20419476,+#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chrX:20419453..20419476, +
3.28e-58FFCP PHASE1:Mm9::chr5:31379477..31379481,+#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr5:31379477..31379481, +
3.28e-58FFCP PHASE2:Mm9::chr8:25706083..25706089,-#_5ae5a5df85554ce46d6e6a24a59f6d3ep4@Ido1
3.28e-58FFCP PHASE1:Mm9::chr2:164480465..164480471,-#_5ae5a5df85554ce46d6e6a24a59f6d3ep2@Wfdc9
3.28e-58FFCP PHASE1:Mm9::chr17:24865194..24865204,+#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr17:24865194..24865204, +
3.28e-58FFCP PHASE1:Mm9::chr4:33600466..33600491,-#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr4:33600466..33600491, -
3.28e-58FFCP PHASE1:Mm9::chr1:43367743..43367754,-#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr1:43367743..43367754, -
3.28e-58FFCP PHASE1:Mm9::chr13:21380670..21380678,-#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr13:21380670..21380678, -
3.28e-58FFCP PHASE2:Mm9::chr10:116399500..116399516,+#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr10:116399500..116399516, +
3.28e-58FFCP PHASE1:Mm9::chr2:25349402..25349409,-#_5ae5a5df85554ce46d6e6a24a59f6d3ep3@Lcn12
3.28e-58FFCP PHASE2:Mm9::chrX:130496260..130496269,-#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chrX:130496260..130496269, -
3.28e-58FFCP PHASE2:Mm9::chr8:107073888..107073914,-#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr8:107073888..107073914, -
3.28e-58FFCP PHASE1:Mm9::chr17:73221016..73221031,+#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr17:73221016..73221031, +
3.28e-58FFCP PHASE2:Mm9::chr17:73221034..73221051,+#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr17:73221034..73221051, +
3.28e-58FFCP PHASE1:Mm9::chr13:46041606..46041640,-#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr13:46041606..46041640, -
3.28e-58FFCP PHASE2:Mm9::chr5:31379972..31379981,+#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr5:31379972..31379981, +
3.28e-58FFCP PHASE1:Mm9::chr9:34813361..34813403,-#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr9:34813361..34813403, -
3.28e-58FFCP PHASE2:Mm9::chr2:160573065..160573077,+#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr2:160573065..160573077, +
3.28e-58FFCP PHASE1:Mm9::chrX:160347529..160347538,+#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chrX:160347529..160347538, +
3.28e-58FFCP PHASE2:Mm9::chr16:25752183..25752203,+#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr16:25752183..25752203, +
3.28e-58FFCP PHASE2:Mm9::chr11:101959282..101959299,-#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr11:101959282..101959299, -
3.28e-58FFCP PHASE2:Mm9::chr1:156048695..156048707,+#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr1:156048695..156048707, +
3.28e-58FFCP PHASE2:Mm9::chr16:22547027..22547063,+#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr16:22547027..22547063, +
3.28e-58FFCP PHASE2:Mm9::chr9:70779586..70779596,+#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr9:70779586..70779596, +
3.28e-58FFCP PHASE2:Mm9::chr7:6204391..6204398,+#_5ae5a5df85554ce46d6e6a24a59f6d3ep2@Gm6792
3.28e-58FFCP PHASE1:Mm9::chr14:52542661..52542668,-#_5ae5a5df85554ce46d6e6a24a59f6d3ep3@Rnase13
3.28e-58FFCP PHASE1:Mm9::chr13:21379261..21379264,-#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr13:21379261..21379264, -
3.28e-58FFCP PHASE2:Mm9::chr12:114385720..114385732,-#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr12:114385720..114385732, -
3.28e-58FFCP PHASE2:Mm9::chr14:66589365..66589371,+#_5ae5a5df85554ce46d6e6a24a59f6d3ep19@Clu
3.28e-58FFCP PHASE2:Mm9::chr5:31379377..31379384,+#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr5:31379377..31379384, +
3.28e-58FFCP PHASE2:Mm9::chr16:92995710..92995753,+#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr16:92995710..92995753, +
3.28e-58FFCP PHASE1:Mm9::chr9:26727675..26727681,-#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr9:26727675..26727681, -
3.28e-58FFCP PHASE2:Mm9::chr19:17591760..17591765,+#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr19:17591760..17591765, +
3.28e-58FFCP PHASE1:Mm9::chr16:23308182..23308185,+#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr16:23308182..23308185, +
3.28e-58FFCP PHASE1:Mm9::chr10:28772042..28772046,-#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr10:28772042..28772046, -
3.28e-58FFCP PHASE1:Mm9::chr8:25706074..25706082,-#_5ae5a5df85554ce46d6e6a24a59f6d3ep3@Ido1
3.28e-58FFCP PHASE2:Mm9::chr1:89597660..89597668,+#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr1:89597660..89597668, +
3.28e-58FFCP PHASE2:Mm9::chr9:65941913..65941923,-#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr9:65941913..65941923, -
3.28e-58FFCP PHASE1:Mm9::chr6:49817766..49817772,-#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr6:49817766..49817772, -
3.28e-58FFCP PHASE2:Mm9::chr8:22061721..22061728,-#_5ae5a5df85554ce46d6e6a24a59f6d3ep2@Gm6040, p2@LOC100503992
3.28e-58FFCP PHASE2:Mm9::chr11:34107562..34107572,-#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr11:34107562..34107572, -
3.28e-58FFCP PHASE2:Mm9::chr1:155722142..155722175,-#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr1:155722142..155722175, -
3.28e-58FFCP PHASE1:Mm9::chr9:100350777..100350782,+#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr9:100350777..100350782, +
3.28e-58FFCP PHASE1:Mm9::chr2:75866210..75866235,+#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr2:75866210..75866235, +
3.28e-58FFCP PHASE1:Mm9::chr13:21379065..21379072,-#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr13:21379065..21379072, -
3.28e-58FFCP PHASE1:Mm9::chr8:126591032..126591039,+#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr8:126591032..126591039, +
3.28e-58FFCP PHASE1:Mm9::chr2:167688595..167688624,+#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr2:167688595..167688624, +
3.28e-58FFCP PHASE2:Mm9::chrX:10488683..10488691,+#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chrX:10488683..10488691, +
3.28e-58FFCP PHASE2:Mm9::chr13:21379322..21379338,-#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr13:21379322..21379338, -
3.28e-58FFCP PHASE1:Mm9::chr17:35249011..35249020,-#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr17:35249011..35249020, -
3.28e-58FFCP PHASE2:Mm9::chr9:35651807..35651818,-#_5ae5a5df85554ce46d6e6a24a59f6d3ep3@9230110F15Rik
3.28e-58FFCP PHASE1:Mm9::chr12:103896072..103896081,-#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr12:103896072..103896081, -
3.28e-58FFCP PHASE1:Mm9::chr1:89597834..89597840,+#_5ae5a5df85554ce46d6e6a24a59f6d3ep@chr1:89597834..89597840, +










Property "Property value" (as page type) with input value "UBPROP:0000001 "Duct of the embryonic kidney, present bilaterally ventral to the somites and leading to the anal region where it empties separately from, and just posterior to the anus. Kimmel et al, 1995.[TAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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