Personal tools

UBERON:0003199: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{UBERON
{{UBERON
|id=UBERON:0003199
|alt_id=UBERON:FBbt_00004894-HAO_0000287
|name=egg chamber
|namespace=
|def=
|xref=FBbt:00004894;;HAO:0000287;;ncithesaurus:Follicle
|is_a=UBERON:0000464
|synonym="follicle" RELATED [FBbt:00004894];;"germarium derived egg chamber" EXACT [FBbt:00004894]
|comment=
|comment=
|alt_id=UBERON:FBbt_00004894-HAO_0000287
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def=
|subset=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0003199
|is_a=UBERON:0000464
|is_obsolete=
|located_in=
|located_in=
|name=egg chamber
|namespace=
|obo_creation_date=
|part_of=
|part_of=
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym="follicle" RELATED [FBbt:00004894];;"germarium derived egg chamber" EXACT [FBbt:00004894]
|union_of=
|xref=FBbt:00004894;;HAO:0000287;;ncithesaurus:Follicle
}}
}}

Revision as of 11:23, 12 September 2014

Name:egg chamber
Xrefs:
links:

FBbt:00004894
HAO:0000287

ncithesaurus:Follicle
Synonyms: "follicle" RELATED [FBbt:00004894]
"germarium derived egg chamber" EXACT [FBbt:00004894]
Alt_id: UBERON:FBbt_00004894-HAO_0000287

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0000464(anatomical space)



Children

is a:FF:10263-104D2 (Follicle Associated Epithelium, pool3)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Mouse (Mus musculus)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0003199 (egg chamber), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
2.74e-44FFCP PHASE1:Mm9::chr17:59564142..59564144,+#_6264ede223163f14d0d6929271885038p@chr17:59564142..59564144, +
2.74e-44FFCP PHASE1:Mm9::chr12:115974938..115974945,-#_6264ede223163f14d0d6929271885038p@chr12:115974938..115974945, -
2.74e-44FFCP PHASE1:Mm9::chr19:38060099..38060102,+#_6264ede223163f14d0d6929271885038p@chr19:38060099..38060102, +
2.74e-44FFCP PHASE2:Mm9::chr2:14201203..14201212,+#_6264ede223163f14d0d6929271885038p@chr2:14201203..14201212, +
2.74e-44FFCP PHASE1:Mm9::chr12:115979100..115979103,-#_6264ede223163f14d0d6929271885038p@chr12:115979100..115979103, -
2.74e-44FFCP PHASE2:Mm9::chr19:38060099..38060102,+#_6264ede223163f14d0d6929271885038p@chr19:38060099..38060102, +
2.74e-44FFCP PHASE1:Mm9::chr2:14201203..14201212,+#_6264ede223163f14d0d6929271885038p@chr2:14201203..14201212, +
2.74e-44FFCP PHASE2:Mm9::chr19:31038353..31038362,+#_6264ede223163f14d0d6929271885038p@chr19:31038353..31038362, +
2.74e-44FFCP PHASE2:Mm9::chr12:115974938..115974945,-#_6264ede223163f14d0d6929271885038p@chr12:115974938..115974945, -
2.74e-44FFCP PHASE2:Mm9::chr17:59564142..59564144,+#_6264ede223163f14d0d6929271885038p@chr17:59564142..59564144, +
2.74e-44FFCP PHASE1:Mm9::chr19:31038353..31038362,+#_6264ede223163f14d0d6929271885038p@chr19:31038353..31038362, +
2.74e-44FFCP PHASE2:Mm9::chr12:115979100..115979103,-#_6264ede223163f14d0d6929271885038p@chr12:115979100..115979103, -
7.47e-44FFCP PHASE1:Mm9::chr9:69086930..69086933,+#_14eaa94db6805c69254168b3bb4838ffp@chr9:69086930..69086933, +
7.47e-44FFCP PHASE1:Mm9::chr6:69701328..69701342,-#_14eaa94db6805c69254168b3bb4838ffp1@ENSMUST00000114212
7.47e-44FFCP PHASE2:Mm9::chr12:116051009..116051016,-#_14eaa94db6805c69254168b3bb4838ffp@chr12:116051009..116051016, -
7.47e-44FFCP PHASE2:Mm9::chr6:69785263..69785268,-#_14eaa94db6805c69254168b3bb4838ffp@chr6:69785263..69785268, -
7.47e-44FFCP PHASE1:Mm9::chr8:23117055..23117056,-#_14eaa94db6805c69254168b3bb4838ffp@chr8:23117055..23117056, -
7.47e-44FFCP PHASE2:Mm9::chr8:23117055..23117056,-#_14eaa94db6805c69254168b3bb4838ffp@chr8:23117055..23117056, -
7.47e-44FFCP PHASE1:Mm9::chr6:69785263..69785268,-#_14eaa94db6805c69254168b3bb4838ffp@chr6:69785263..69785268, -
7.47e-44FFCP PHASE2:Mm9::chr2:63059909..63059910,+#_14eaa94db6805c69254168b3bb4838ffp@chr2:63059909..63059910, +
7.47e-44FFCP PHASE1:Mm9::chr12:116051009..116051016,-#_14eaa94db6805c69254168b3bb4838ffp@chr12:116051009..116051016, -
7.47e-44FFCP PHASE2:Mm9::chr9:69086930..69086933,+#_14eaa94db6805c69254168b3bb4838ffp@chr9:69086930..69086933, +
7.47e-44FFCP PHASE2:Mm9::chr4:12792617..12792619,-#_14eaa94db6805c69254168b3bb4838ffp@chr4:12792617..12792619, -
7.47e-44FFCP PHASE1:Mm9::chr4:12792617..12792619,-#_14eaa94db6805c69254168b3bb4838ffp@chr4:12792617..12792619, -
7.47e-44FFCP PHASE1:Mm9::chr2:63059909..63059910,+#_14eaa94db6805c69254168b3bb4838ffp@chr2:63059909..63059910, +
7.47e-44FFCP PHASE2:Mm9::chr6:69701328..69701342,-#_14eaa94db6805c69254168b3bb4838ffp1@ENSMUST00000114212
2.87e-30FFCP PHASE2:Mm9::chr6:143591339..143591345,+#_ce650b30a24ab19045135537703ece80p@chr6:143591339..143591345, +
2.87e-30FFCP PHASE1:Mm9::chr2:45535559..45535562,+#_ce650b30a24ab19045135537703ece80p@chr2:45535559..45535562, +
2.87e-30FFCP PHASE1:Mm9::chr8:25523566..25523573,+#_ce650b30a24ab19045135537703ece80p@chr8:25523566..25523573, +
2.87e-30FFCP PHASE2:Mm9::chr2:45535559..45535562,+#_ce650b30a24ab19045135537703ece80p@chr2:45535559..45535562, +
2.87e-30FFCP PHASE2:Mm9::chr19:32143349..32143352,-#_ce650b30a24ab19045135537703ece80p@chr19:32143349..32143352, -
2.87e-30FFCP PHASE1:Mm9::chr19:32143349..32143352,-#_ce650b30a24ab19045135537703ece80p@chr19:32143349..32143352, -
2.87e-30FFCP PHASE1:Mm9::chr6:143591339..143591345,+#_ce650b30a24ab19045135537703ece80p@chr6:143591339..143591345, +
2.87e-30FFCP PHASE2:Mm9::chr8:25523566..25523573,+#_ce650b30a24ab19045135537703ece80p@chr8:25523566..25523573, +
5.62e-30FFCP PHASE2:Mm9::chr7:151964837..151964841,-#_dc3c23ad45802b23d4b775184cb98623p@chr7:151964837..151964841, -
5.62e-30FFCP PHASE1:Mm9::chr6:115894954..115894961,+#_dc3c23ad45802b23d4b775184cb98623p1@H1foo
5.62e-30FFCP PHASE1:Mm9::chr7:151964837..151964841,-#_dc3c23ad45802b23d4b775184cb98623p@chr7:151964837..151964841, -
5.62e-30FFCP PHASE1:Mm9::chr19:44484947..44484956,-#_dc3c23ad45802b23d4b775184cb98623p@chr19:44484947..44484956, -
5.62e-30FFCP PHASE2:Mm9::chr2:81509850..81509853,+#_dc3c23ad45802b23d4b775184cb98623p@chr2:81509850..81509853, +
5.62e-30FFCP PHASE2:Mm9::chr15:94925831..94925836,+#_dc3c23ad45802b23d4b775184cb98623p@chr15:94925831..94925836, +
5.62e-30FFCP PHASE1:Mm9::chr12:114598121..114598167,+#_dc3c23ad45802b23d4b775184cb98623p@chr12:114598121..114598167, +
5.62e-30FFCP PHASE1:Mm9::chr6:28646564..28646565,-#_dc3c23ad45802b23d4b775184cb98623p@chr6:28646564..28646565, -
5.62e-30FFCP PHASE2:Mm9::chr6:115894954..115894961,+#_dc3c23ad45802b23d4b775184cb98623p1@H1foo
5.62e-30FFCP PHASE2:Mm9::chr8:107279610..107279613,+#_dc3c23ad45802b23d4b775184cb98623p@chr8:107279610..107279613, +
5.62e-30FFCP PHASE2:Mm9::chr16:15705318..15705342,+#_dc3c23ad45802b23d4b775184cb98623p@chr16:15705318..15705342, +
5.62e-30FFCP PHASE1:Mm9::chr1:40599829..40599836,+#_dc3c23ad45802b23d4b775184cb98623p@chr1:40599829..40599836, +
5.62e-30FFCP PHASE1:Mm9::chr11:42881914..42881920,+#_dc3c23ad45802b23d4b775184cb98623p@chr11:42881914..42881920, +
5.62e-30FFCP PHASE1:Mm9::chr8:107279610..107279613,+#_dc3c23ad45802b23d4b775184cb98623p@chr8:107279610..107279613, +
5.62e-30FFCP PHASE2:Mm9::chr19:44484947..44484956,-#_dc3c23ad45802b23d4b775184cb98623p@chr19:44484947..44484956, -
5.62e-30FFCP PHASE2:Mm9::chr12:115366227..115366256,-#_dc3c23ad45802b23d4b775184cb98623p@chr12:115366227..115366256, -
5.62e-30FFCP PHASE1:Mm9::chr16:15705318..15705342,+#_dc3c23ad45802b23d4b775184cb98623p@chr16:15705318..15705342, +
5.62e-30FFCP PHASE1:Mm9::chr15:94925831..94925836,+#_dc3c23ad45802b23d4b775184cb98623p@chr15:94925831..94925836, +
5.62e-30FFCP PHASE2:Mm9::chr14:11955268..11955270,+#_dc3c23ad45802b23d4b775184cb98623p@chr14:11955268..11955270, +
5.62e-30FFCP PHASE2:Mm9::chr11:42881914..42881920,+#_dc3c23ad45802b23d4b775184cb98623p@chr11:42881914..42881920, +
5.62e-30FFCP PHASE2:Mm9::chr1:40599829..40599836,+#_dc3c23ad45802b23d4b775184cb98623p@chr1:40599829..40599836, +
5.62e-30FFCP PHASE2:Mm9::chr12:114598121..114598167,+#_dc3c23ad45802b23d4b775184cb98623p@chr12:114598121..114598167, +
5.62e-30FFCP PHASE1:Mm9::chr2:81509850..81509853,+#_dc3c23ad45802b23d4b775184cb98623p@chr2:81509850..81509853, +
5.62e-30FFCP PHASE1:Mm9::chr12:115366227..115366256,-#_dc3c23ad45802b23d4b775184cb98623p@chr12:115366227..115366256, -
5.62e-30FFCP PHASE2:Mm9::chr6:28646564..28646565,-#_dc3c23ad45802b23d4b775184cb98623p@chr6:28646564..28646565, -
5.62e-30FFCP PHASE1:Mm9::chr14:11955268..11955270,+#_dc3c23ad45802b23d4b775184cb98623p@chr14:11955268..11955270, +
1.1e-29FFCP PHASE1:Mm9::chr2:21228521..21228523,+#_3e9796787a63eaf004c759db1861a1bbp@chr2:21228521..21228523, +
1.1e-29FFCP PHASE2:Mm9::chr2:21228521..21228523,+#_3e9796787a63eaf004c759db1861a1bbp@chr2:21228521..21228523, +
1.1e-29FFCP PHASE1:Mm9::chr16:23307987..23308007,+#_3e9796787a63eaf004c759db1861a1bbp@chr16:23307987..23308007, +
1.1e-29FFCP PHASE1:Mm9::chr2:127182898..127182901,+#_3e9796787a63eaf004c759db1861a1bbp@chr2:127182898..127182901, +
1.1e-29FFCP PHASE2:Mm9::chr16:23307987..23308007,+#_3e9796787a63eaf004c759db1861a1bbp@chr16:23307987..23308007, +
1.1e-29FFCP PHASE2:Mm9::chr2:127182898..127182901,+#_3e9796787a63eaf004c759db1861a1bbp@chr2:127182898..127182901, +
3.06e-23FFCP PHASE2:Mm9::chr2:121139477..121139481,-#_12e267d58e090ccf12a60b2aa3473fe9p@chr2:121139477..121139481, -
3.06e-23FFCP PHASE1:Mm9::chr5:8659958..8659960,+#_12e267d58e090ccf12a60b2aa3473fe9p3@Abcb1a
3.06e-23FFCP PHASE1:Mm9::chr12:114545296..114545316,-#_12e267d58e090ccf12a60b2aa3473fe9p2@uc007pgn.1
3.06e-23FFCP PHASE2:Mm9::chr2:172818218..172818220,+#_12e267d58e090ccf12a60b2aa3473fe9p@chr2:172818218..172818220, +
3.06e-23FFCP PHASE2:Mm9::chr12:115694343..115694368,-#_12e267d58e090ccf12a60b2aa3473fe9p1@uc007pgz.1
3.06e-23FFCP PHASE2:Mm9::chrX:84015807..84015814,+#_12e267d58e090ccf12a60b2aa3473fe9p@chrX:84015807..84015814, +
3.06e-23FFCP PHASE1:Mm9::chr2:121139477..121139481,-#_12e267d58e090ccf12a60b2aa3473fe9p@chr2:121139477..121139481, -
3.06e-23FFCP PHASE1:Mm9::chrX:84015807..84015814,+#_12e267d58e090ccf12a60b2aa3473fe9p@chrX:84015807..84015814, +
3.06e-23FFCP PHASE2:Mm9::chr5:8659958..8659960,+#_12e267d58e090ccf12a60b2aa3473fe9p3@Abcb1a
3.06e-23FFCP PHASE1:Mm9::chr12:115694343..115694368,-#_12e267d58e090ccf12a60b2aa3473fe9p1@uc007pgz.1
3.06e-23FFCP PHASE2:Mm9::chr19:32144164..32144171,-#_12e267d58e090ccf12a60b2aa3473fe9p@chr19:32144164..32144171, -
3.06e-23FFCP PHASE1:Mm9::chr2:172818218..172818220,+#_12e267d58e090ccf12a60b2aa3473fe9p@chr2:172818218..172818220, +
3.06e-23FFCP PHASE1:Mm9::chr19:32144164..32144171,-#_12e267d58e090ccf12a60b2aa3473fe9p@chr19:32144164..32144171, -
3.06e-23FFCP PHASE2:Mm9::chr12:114545296..114545316,-#_12e267d58e090ccf12a60b2aa3473fe9p2@uc007pgn.1
5.07e-23FFCP PHASE2:Mm9::chr6:92256099..92256107,+#_79e649b23f2f8104d8e2cee95e4de2cap@chr6:92256099..92256107, +
5.07e-23FFCP PHASE1:Mm9::chr12:114498371..114498382,+#_79e649b23f2f8104d8e2cee95e4de2cap@chr12:114498371..114498382, +
5.07e-23FFCP PHASE2:Mm9::chr12:117248348..117248352,-#_79e649b23f2f8104d8e2cee95e4de2cap1@uc011yvj.1
5.07e-23FFCP PHASE2:Mm9::chr13:101017287..101017298,-#_79e649b23f2f8104d8e2cee95e4de2cap1@Naip5
5.07e-23FFCP PHASE2:Mm9::chr19:5952629..5952640,+#_79e649b23f2f8104d8e2cee95e4de2cap@chr19:5952629..5952640, +
5.07e-23FFCP PHASE1:Mm9::chr2:91153159..91153160,+#_79e649b23f2f8104d8e2cee95e4de2cap@chr2:91153159..91153160, +
5.07e-23FFCP PHASE2:Mm9::chr2:91153159..91153160,+#_79e649b23f2f8104d8e2cee95e4de2cap@chr2:91153159..91153160, +
5.07e-23FFCP PHASE1:Mm9::chr19:5952629..5952640,+#_79e649b23f2f8104d8e2cee95e4de2cap@chr19:5952629..5952640, +
5.07e-23FFCP PHASE1:Mm9::chr12:114498387..114498408,+#_79e649b23f2f8104d8e2cee95e4de2cap@chr12:114498387..114498408, +
5.07e-23FFCP PHASE1:Mm9::chr12:114546123..114546134,-#_79e649b23f2f8104d8e2cee95e4de2cap@chr12:114546123..114546134, -
5.07e-23FFCP PHASE2:Mm9::chr12:114498371..114498382,+#_79e649b23f2f8104d8e2cee95e4de2cap@chr12:114498371..114498382, +
5.07e-23FFCP PHASE1:Mm9::chr13:101017287..101017298,-#_79e649b23f2f8104d8e2cee95e4de2cap1@Naip5
5.07e-23FFCP PHASE1:Mm9::chr12:117248348..117248352,-#_79e649b23f2f8104d8e2cee95e4de2cap1@uc011yvj.1
5.07e-23FFCP PHASE2:Mm9::chr12:114498387..114498408,+#_79e649b23f2f8104d8e2cee95e4de2cap@chr12:114498387..114498408, +
5.07e-23FFCP PHASE1:Mm9::chr6:92256099..92256107,+#_79e649b23f2f8104d8e2cee95e4de2cap@chr6:92256099..92256107, +
5.07e-23FFCP PHASE2:Mm9::chr12:114546123..114546134,-#_79e649b23f2f8104d8e2cee95e4de2cap@chr12:114546123..114546134, -
8.39e-23FFCP PHASE1:Mm9::chr6:92399181..92399191,+#_bead35a501814a20d9c9396dfa03fc48p@chr6:92399181..92399191, +
8.39e-23FFCP PHASE1:Mm9::chr7:28886273..28886282,+#_bead35a501814a20d9c9396dfa03fc48p13@Fcgbp
8.39e-23FFCP PHASE2:Mm9::chr6:92399181..92399191,+#_bead35a501814a20d9c9396dfa03fc48p@chr6:92399181..92399191, +
8.39e-23FFCP PHASE1:Mm9::chr14:120118559..120118564,+#_bead35a501814a20d9c9396dfa03fc48p@chr14:120118559..120118564, +

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=UBERON:0003199&oldid=3274210"