Personal tools

UBERON:0003928: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{UBERON
{{UBERON
|id=UBERON:0003928
|alt_id=
|name=digestive system duct
|namespace=
|def="A duct that is part of a digestive system [Obol]." [OBOL:automatic]
|xref=TAO:0005162;;ZFA:0005162
|is_a=UBERON:0000058
|synonym="duct of digestive system" EXACT [OBOL:automatic];;"duct of gastrointestinal system" EXACT [OBOL:automatic];;"gastrointestinal system duct" EXACT [OBOL:automatic]
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="A duct that is part of a digestive system [Obol]." [OBOL:automatic]
|subset=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0003928
|is_a=UBERON:0000058
|is_obsolete=
|located_in=
|located_in=
|name=digestive system duct
|namespace=
|obo_creation_date=
|part_of=UBERON:0001007
|part_of=UBERON:0001007
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym="duct of digestive system" EXACT [OBOL:automatic];;"duct of gastrointestinal system" EXACT [OBOL:automatic];;"gastrointestinal system duct" EXACT [OBOL:automatic]
|union_of=
|xref=TAO:0005162;;ZFA:0005162
}}
}}

Revision as of 11:26, 12 September 2014

Name:digestive system duct
Definition:"A duct that is part of a digestive system [Obol]." [OBOL:automatic]
Xrefs:
links:

TAO:0005162

ZFA:0005162
Synonyms: "duct of digestive system" EXACT [OBOL:automatic]
"duct of gastrointestinal system" EXACT [OBOL:automatic]
"gastrointestinal system duct" EXACT [OBOL:automatic]

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0000058(duct)
part_of:UBERON:0001007(digestive system)



Children

is a:UBERON:0002394 (bile duct),UBERON:0004913 (hepatopancreatic ampulla),UBERON:0007329 (pancreatic duct)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0003928 (digestive system duct), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
3.07e-86FFCP PHASE1:Mm9::chr6:92938260..92938264,-#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr6:92938260..92938264, -
3.07e-86FFCP PHASE1:Mm9::chr18:65159026..65159034,-#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr18:65159026..65159034, -
3.07e-86FFCP PHASE2:Mm9::chr10:8586393..8586401,+#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr10:8586393..8586401, +
3.07e-86FFCP PHASE2:Mm9::chr17:35945332..35945335,+#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr17:35945332..35945335, +
3.07e-86FFCP PHASE1:Mm9::chr9:62199266..62199267,+#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr9:62199266..62199267, +
3.07e-86FFCP PHASE2:Mm9::chr13:113053257..113053258,+#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr13:113053257..113053258, +
3.07e-86FFCP PHASE1:Mm9::chr13:5840965..5840966,+#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr13:5840965..5840966, +
3.07e-86FFCP PHASE2:Mm9::chr13:113543694..113543702,-#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr13:113543694..113543702, -
3.07e-86FFCP PHASE1:Mm9::chr5:33088768..33088773,+#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr5:33088768..33088773, +
3.07e-86FFCP PHASE2:Mm9::chr8:114250006..114250039,-#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr8:114250006..114250039, -
3.07e-86FFCP PHASE1:Mm9::chr18:44793802..44793835,+#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr18:44793802..44793835, +
3.07e-86FFCP PHASE2:Mm9::chr10:85586219..85586227,+#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr10:85586219..85586227, +
3.07e-86FFCP PHASE2:Mm9::chr3:9705000..9705004,-#_f74c7e3398ca3e8b41131d1a5959c6e6p4@Pag1
3.07e-86FFCP PHASE1:Mm9::chr9:45920408..45920437,-#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr9:45920408..45920437, -
3.07e-86FFCP PHASE1:Mm9::chr2:133323630..133323631,+#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr2:133323630..133323631, +
3.07e-86FFCP PHASE1:Mm9::chr1:173044327..173044331,+#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr1:173044327..173044331, +
3.07e-86FFCP PHASE1:Mm9::chr14:8928284..8928331,+#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr14:8928284..8928331, +
3.07e-86FFCP PHASE2:Mm9::chr5:124112234..124112240,+#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr5:124112234..124112240, +
3.07e-86FFCP PHASE2:Mm9::chr8:127816016..127816021,+#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr8:127816016..127816021, +
3.07e-86FFCP PHASE2:Mm9::chr17:67870501..67870507,+#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr17:67870501..67870507, +
3.07e-86FFCP PHASE2:Mm9::chr9:42915185..42915192,-#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr9:42915185..42915192, -
3.07e-86FFCP PHASE2:Mm9::chr1:137570295..137570315,+#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr1:137570295..137570315, +
3.07e-86FFCP PHASE2:Mm9::chr5:33088768..33088773,+#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr5:33088768..33088773, +
3.07e-86FFCP PHASE1:Mm9::chr11:118287827..118287833,-#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr11:118287827..118287833, -
3.07e-86FFCP PHASE2:Mm9::chr17:35094068..35094092,-#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr17:35094068..35094092, -
3.07e-86FFCP PHASE1:Mm9::chr4:86335502..86335509,+#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr4:86335502..86335509, +
3.07e-86FFCP PHASE1:Mm9::chr10:8471698..8471701,+#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr10:8471698..8471701, +
3.07e-86FFCP PHASE2:Mm9::chr7:87919399..87919406,+#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr7:87919399..87919406, +
3.07e-86FFCP PHASE2:Mm9::chr14:101778294..101778296,+#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr14:101778294..101778296, +
3.07e-86FFCP PHASE1:Mm9::chr2:84756280..84756286,+#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr2:84756280..84756286, +
3.07e-86FFCP PHASE2:Mm9::chr9:62199266..62199267,+#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr9:62199266..62199267, +
3.07e-86FFCP PHASE1:Mm9::chr11:68437375..68437378,+#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr11:68437375..68437378, +
3.07e-86FFCP PHASE2:Mm9::chr11:119254092..119254100,-#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr11:119254092..119254100, -
3.07e-86FFCP PHASE2:Mm9::chr11:117829935..117829959,-#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr11:117829935..117829959, -
3.07e-86FFCP PHASE2:Mm9::chr10:93942324..93942342,-#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr10:93942324..93942342, -
3.07e-86FFCP PHASE2:Mm9::chr7:118133901..118133904,-#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr7:118133901..118133904, -
3.07e-86FFCP PHASE1:Mm9::chr13:113542610..113542614,+#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr13:113542610..113542614, +
3.07e-86FFCP PHASE2:Mm9::chr4:100890388..100890423,+#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr4:100890388..100890423, +
3.07e-86FFCP PHASE1:Mm9::chr15:32178407..32178408,-#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr15:32178407..32178408, -
3.07e-86FFCP PHASE1:Mm9::chr12:86691503..86691504,-#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr12:86691503..86691504, -
3.07e-86FFCP PHASE2:Mm9::chr5:76329688..76329692,-#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr5:76329688..76329692, -
3.07e-86FFCP PHASE2:Mm9::chr7:117101788..117101793,+#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr7:117101788..117101793, +
3.07e-86FFCP PHASE2:Mm9::chr10:21389022..21389032,+#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr10:21389022..21389032, +
3.07e-86FFCP PHASE1:Mm9::chr10:93942324..93942342,-#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr10:93942324..93942342, -
3.07e-86FFCP PHASE1:Mm9::chr17:35093377..35093381,+#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr17:35093377..35093381, +
3.07e-86FFCP PHASE2:Mm9::chr6:15678147..15678149,-#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr6:15678147..15678149, -
3.07e-86FFCP PHASE2:Mm9::chr11:109223756..109223764,-#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr11:109223756..109223764, -
3.07e-86FFCP PHASE1:Mm9::chr17:24807620..24807650,-#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr17:24807620..24807650, -
3.07e-86FFCP PHASE1:Mm9::chr15:82193340..82193343,+#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr15:82193340..82193343, +
3.07e-86FFCP PHASE2:Mm9::chr17:35106749..35106752,-#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr17:35106749..35106752, -
3.07e-86FFCP PHASE1:Mm9::chr18:39297570..39297573,-#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr18:39297570..39297573, -
3.07e-86FFCP PHASE1:Mm9::chr14:15179132..15179141,+#_f74c7e3398ca3e8b41131d1a5959c6e6p8@Il3ra
3.07e-86FFCP PHASE1:Mm9::chr9:42915220..42915225,-#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr9:42915220..42915225, -
3.07e-86FFCP PHASE2:Mm9::chr4:141645056..141645068,+#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr4:141645056..141645068, +
3.07e-86FFCP PHASE2:Mm9::chr9:116223548..116223551,+#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr9:116223548..116223551, +
3.07e-86FFCP PHASE2:Mm9::chr12:86691530..86691535,-#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr12:86691530..86691535, -
3.07e-86FFCP PHASE2:Mm9::chr18:60398371..60398393,-#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr18:60398371..60398393, -
3.07e-86FFCP PHASE2:Mm9::chr17:35093377..35093381,+#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr17:35093377..35093381, +
3.07e-86FFCP PHASE1:Mm9::chr18:35881716..35881727,-#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr18:35881716..35881727, -
3.07e-86FFCP PHASE1:Mm9::chr13:96429295..96429302,-#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr13:96429295..96429302, -
3.07e-86FFCP PHASE1:Mm9::chr10:117419958..117419964,+#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr10:117419958..117419964, +
3.07e-86FFCP PHASE2:Mm9::chr16:85547242..85547252,+#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr16:85547242..85547252, +
3.07e-86FFCP PHASE1:Mm9::chr12:74684893..74684910,-#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr12:74684893..74684910, -
3.07e-86FFCP PHASE1:Mm9::chr8:11183699..11183703,-#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr8:11183699..11183703, -
3.07e-86FFCP PHASE1:Mm9::chr5:53111093..53111095,+#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr5:53111093..53111095, +
3.07e-86FFCP PHASE2:Mm9::chr3:90270007..90270012,+#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr3:90270007..90270012, +
3.07e-86FFCP PHASE1:Mm9::chr17:35096519..35096524,+#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr17:35096519..35096524, +
3.07e-86FFCP PHASE2:Mm9::chr13:113550715..113550722,-#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr13:113550715..113550722, -
3.07e-86FFCP PHASE1:Mm9::chr1:66883923..66883955,-#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr1:66883923..66883955, -
3.07e-86FFCP PHASE2:Mm9::chr12:87046930..87046933,+#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr12:87046930..87046933, +
3.07e-86FFCP PHASE2:Mm9::chr10:85587155..85587188,+#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr10:85587155..85587188, +
3.07e-86FFCP PHASE2:Mm9::chr15:82193340..82193343,+#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr15:82193340..82193343, +
3.07e-86FFCP PHASE2:Mm9::chr9:42915220..42915225,-#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr9:42915220..42915225, -
3.07e-86FFCP PHASE2:Mm9::chr13:100000226..100000230,+#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr13:100000226..100000230, +
3.07e-86FFCP PHASE1:Mm9::chr17:12388232..12388237,+#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr17:12388232..12388237, +
3.07e-86FFCP PHASE2:Mm9::chr1:138241693..138241697,+#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr1:138241693..138241697, +
3.07e-86FFCP PHASE1:Mm9::chr8:127816016..127816021,+#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr8:127816016..127816021, +
3.07e-86FFCP PHASE1:Mm9::chr10:85585949..85585969,-#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr10:85585949..85585969, -
3.07e-86FFCP PHASE2:Mm9::chr4:62009160..62009164,-#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr4:62009160..62009164, -
3.07e-86FFCP PHASE1:Mm9::chr2:11935531..11935538,-#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr2:11935531..11935538, -
3.07e-86FFCP PHASE2:Mm9::chr8:25530071..25530072,+#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr8:25530071..25530072, +
3.07e-86FFCP PHASE2:Mm9::chr2:84756280..84756286,+#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr2:84756280..84756286, +
3.07e-86FFCP PHASE1:Mm9::chr3:121593688..121593695,+#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr3:121593688..121593695, +
3.07e-86FFCP PHASE2:Mm9::chr17:12388232..12388237,+#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr17:12388232..12388237, +
3.07e-86FFCP PHASE2:Mm9::chr2:169549462..169549477,+#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr2:169549462..169549477, +
3.07e-86FFCP PHASE1:Mm9::chr12:100752983..100752984,+#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr12:100752983..100752984, +
3.07e-86FFCP PHASE2:Mm9::chr12:88237840..88237851,-#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr12:88237840..88237851, -
3.07e-86FFCP PHASE1:Mm9::chr13:113543694..113543702,-#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr13:113543694..113543702, -
3.07e-86FFCP PHASE1:Mm9::chr12:86691530..86691535,-#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr12:86691530..86691535, -
3.07e-86FFCP PHASE2:Mm9::chr2:129407463..129407468,-#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr2:129407463..129407468, -
3.07e-86FFCP PHASE1:Mm9::chr15:90508949..90508955,-#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr15:90508949..90508955, -
3.07e-86FFCP PHASE2:Mm9::chr15:88669906..88669914,+#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr15:88669906..88669914, +
3.07e-86FFCP PHASE2:Mm9::chr15:59435855..59435878,-#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr15:59435855..59435878, -
3.07e-86FFCP PHASE1:Mm9::chr5:114422970..114422985,-#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr5:114422970..114422985, -
3.07e-86FFCP PHASE1:Mm9::chr17:35093616..35093631,-#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr17:35093616..35093631, -
3.07e-86FFCP PHASE2:Mm9::chr11:109223779..109223789,-#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr11:109223779..109223789, -
3.07e-86FFCP PHASE1:Mm9::chr5:124112234..124112240,+#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr5:124112234..124112240, +
3.07e-86FFCP PHASE1:Mm9::chr11:107196799..107196814,+#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr11:107196799..107196814, +
3.07e-86FFCP PHASE2:Mm9::chr6:34549876..34549892,-#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr6:34549876..34549892, -
3.07e-86FFCP PHASE1:Mm9::chr7:87919399..87919406,+#_f74c7e3398ca3e8b41131d1a5959c6e6p@chr7:87919399..87919406, +

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=UBERON:0003928&oldid=3274282"