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{{UBERON
{{UBERON
|id=UBERON:0004875
|alt_id=
|name=nephrogenic cord
|namespace=
|def="a portion of the urogenital ridge which is the source of much of the urinary system[WP]." [Wikipedia:Nephrogenic_cord]
|xref=FMA:72168;;ncithesaurus:Nephrogenic_Cord;;SCTID:361405003
|is_a=UBERON:0005423
|synonym="chorda nephrogenica" RELATED LATIN [Wikipedia:Nephrogenic_cord]
|comment=part_of or develops_from urogenital ridge?
|comment=part_of or develops_from urogenital ridge?
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="a portion of the urogenital ridge which is the source of much of the urinary system[WP]." [Wikipedia:Nephrogenic_cord]
|subset=
|derives_from=
|derives_from=
|develops_from=UBERON:0004876
|develops_from=UBERON:0004876
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0004875
|is_a=UBERON:0005423
|is_obsolete=
|located_in=
|located_in=
|name=nephrogenic cord
|namespace=
|obo_creation_date=
|part_of=UBERON:0000922
|part_of=UBERON:0000922
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym="chorda nephrogenica" RELATED LATIN [Wikipedia:Nephrogenic_cord]
|union_of=
|xref=FMA:72168;;ncithesaurus:Nephrogenic_Cord;;SCTID:361405003
}}
}}

Revision as of 11:32, 12 September 2014

Name:nephrogenic cord
Definition:"a portion of the urogenital ridge which is the source of much of the urinary system[WP]." [Wikipedia:Nephrogenic_cord]
Xrefs:
links:

FMA:72168
ncithesaurus:Nephrogenic_Cord

SCTID:361405003
Synonyms: "chorda nephrogenica" RELATED LATIN [Wikipedia:Nephrogenic_cord]
Comments:part_of or develops_from urogenital ridge?

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0005423(developing anatomical structure)
develops_from:UBERON:0004876(urogenital ridge)
part_of:UBERON:0000922(embryo)



Children

part of:UBERON:0005754 (rostral part of nephrogenic cord)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology



Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004875 (nephrogenic cord), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
2.83e-65FFCP PHASE2:Mm9::chr18:44264202..44264213,+#_3e74b05bcd4ae70139df9224d331bf42p4@Spink12
2.83e-65FFCP PHASE2:Mm9::chr14:63665679..63665688,+#_3e74b05bcd4ae70139df9224d331bf42p4@Defb42
2.83e-65FFCP PHASE1:Mm9::chr18:44264202..44264213,+#_3e74b05bcd4ae70139df9224d331bf42p4@Spink12
2.83e-65FFCP PHASE2:Mm9::chr10:127470655..127470664,+#_3e74b05bcd4ae70139df9224d331bf42p@chr10:127470655..127470664, +
2.83e-65FFCP PHASE2:Mm9::chr14:63585028..63585037,-#_3e74b05bcd4ae70139df9224d331bf42p@chr14:63585028..63585037, -
2.83e-65FFCP PHASE1:Mm9::chr10:127470655..127470664,+#_3e74b05bcd4ae70139df9224d331bf42p@chr10:127470655..127470664, +
2.83e-65FFCP PHASE1:Mm9::chr14:63585028..63585037,-#_3e74b05bcd4ae70139df9224d331bf42p@chr14:63585028..63585037, -
2.83e-65FFCP PHASE1:Mm9::chr14:63665679..63665688,+#_3e74b05bcd4ae70139df9224d331bf42p4@Defb42
3.99e-50FFCP PHASE1:Mm9::chr2:152388713..152388729,+#_c356b2c847a515521a6fe753444b3a76p@chr2:152388713..152388729, +
3.99e-50FFCP PHASE2:Mm9::chr2:152388713..152388729,+#_c356b2c847a515521a6fe753444b3a76p@chr2:152388713..152388729, +
5.6e-50FFCP PHASE1:Hg19::chr2:120409486..120409492,+#_a52ba957e8ad4186f4d8110f79d26ad7p@chr2:120409486..120409492, +
5.6e-50FFCP PHASE2:Hg19::chr2:120409486..120409492,+#_a52ba957e8ad4186f4d8110f79d26ad7p@chr2:120409486..120409492, +
1.6e-49FFCP PHASE1:Mm9::chr9:35597686..35597691,-#_386211f7cdcce24144f83dd84ef487d5p2@D730048I06Rik, p2@Gm17727
1.6e-49FFCP PHASE1:Mm9::chr14:63585048..63585062,-#_386211f7cdcce24144f83dd84ef487d5p@chr14:63585048..63585062, -
1.6e-49FFCP PHASE1:Mm9::chr11:76361451..76361499,+#_386211f7cdcce24144f83dd84ef487d5p@chr11:76361451..76361499, +
1.6e-49FFCP PHASE2:Mm9::chr11:105797641..105797656,-#_386211f7cdcce24144f83dd84ef487d5p4@Cyb561
1.6e-49FFCP PHASE2:Mm9::chr14:63585020..63585025,-#_386211f7cdcce24144f83dd84ef487d5p@chr14:63585020..63585025, -
1.6e-49FFCP PHASE2:Mm9::chr11:76361451..76361499,+#_386211f7cdcce24144f83dd84ef487d5p@chr11:76361451..76361499, +
1.6e-49FFCP PHASE1:Mm9::chr14:63585020..63585025,-#_386211f7cdcce24144f83dd84ef487d5p@chr14:63585020..63585025, -
1.6e-49FFCP PHASE2:Mm9::chr14:63585048..63585062,-#_386211f7cdcce24144f83dd84ef487d5p@chr14:63585048..63585062, -
1.6e-49FFCP PHASE2:Mm9::chr9:35597686..35597691,-#_386211f7cdcce24144f83dd84ef487d5p2@D730048I06Rik, p2@Gm17727
1.6e-49FFCP PHASE1:Mm9::chr11:105797641..105797656,-#_386211f7cdcce24144f83dd84ef487d5p4@Cyb561
2.33e-49FFCP PHASE1:Mm9::chr14:63627556..63627564,-#_d9799cdb5d1792b54fa1fa8cc7d7483ap@chr14:63627556..63627564, -
2.33e-49FFCP PHASE2:Mm9::chr9:26732045..26732085,+#_d9799cdb5d1792b54fa1fa8cc7d7483ap@chr9:26732045..26732085, +
2.33e-49FFCP PHASE1:Mm9::chr9:26732045..26732085,+#_d9799cdb5d1792b54fa1fa8cc7d7483ap@chr9:26732045..26732085, +
2.33e-49FFCP PHASE2:Mm9::chr14:63627556..63627564,-#_d9799cdb5d1792b54fa1fa8cc7d7483ap@chr14:63627556..63627564, -
2.33e-49FFCP PHASE1:Mm9::chr14:51734043..51734054,+#_d9799cdb5d1792b54fa1fa8cc7d7483ap2@Eddm3b
2.33e-49FFCP PHASE2:Mm9::chr14:51734043..51734054,+#_d9799cdb5d1792b54fa1fa8cc7d7483ap2@Eddm3b
2.33e-49FFCP PHASE1:Mm9::chr9:26611246..26611253,-#_d9799cdb5d1792b54fa1fa8cc7d7483ap@chr9:26611246..26611253, -
2.33e-49FFCP PHASE2:Mm9::chr9:26611246..26611253,-#_d9799cdb5d1792b54fa1fa8cc7d7483ap@chr9:26611246..26611253, -
3.4e-49FFCP PHASE2:Mm9::chr2:69981027..69981032,+#_7e60dff3c96e89262e358066b0d5d3cap@chr2:69981027..69981032, +
3.4e-49FFCP PHASE1:Mm9::chr2:69981027..69981032,+#_7e60dff3c96e89262e358066b0d5d3cap@chr2:69981027..69981032, +
9.75e-45FFCP PHASE1:Hg19::chr10:102505655..102505689,+#_121e7bbcf9d5f9174346c0dd1cd0f66ep10@PAX2
9.75e-45FFCP PHASE1:Hg19::chr1:172416185..172416189,-#_121e7bbcf9d5f9174346c0dd1cd0f66ep@chr1:172416185..172416189, -
9.75e-45FFCP PHASE2:Hg19::chr10:102505655..102505689,+#_121e7bbcf9d5f9174346c0dd1cd0f66ep10@PAX2
9.75e-45FFCP PHASE2:Hg19::chr1:172416185..172416189,-#_121e7bbcf9d5f9174346c0dd1cd0f66ep@chr1:172416185..172416189, -
9.75e-45FFCP PHASE2:Hg19::chr14:68644730..68644737,+#_121e7bbcf9d5f9174346c0dd1cd0f66ep@chr14:68644730..68644737, +
9.75e-45FFCP PHASE1:Hg19::chr14:68644730..68644737,+#_121e7bbcf9d5f9174346c0dd1cd0f66ep@chr14:68644730..68644737, +
4.54e-44FFCP PHASE2:Mm9::chr13:21379125..21379144,-#_2c808356ccd804cd36d69a04f78b05bep@chr13:21379125..21379144, -
4.54e-44FFCP PHASE2:Mm9::chr14:63611303..63611312,+#_2c808356ccd804cd36d69a04f78b05bep@chr14:63611303..63611312, +
4.54e-44FFCP PHASE2:Mm9::chr2:164479326..164479336,+#_2c808356ccd804cd36d69a04f78b05bep@chr2:164479326..164479336, +
4.54e-44FFCP PHASE1:Mm9::chr8:113585667..113585673,-#_2c808356ccd804cd36d69a04f78b05bep@chr8:113585667..113585673, -
4.54e-44FFCP PHASE2:Mm9::chr13:52712744..52712754,+#_2c808356ccd804cd36d69a04f78b05bep@chr13:52712744..52712754, +
4.54e-44FFCP PHASE1:Mm9::chr2:167688595..167688624,+#_2c808356ccd804cd36d69a04f78b05bep@chr2:167688595..167688624, +
4.54e-44FFCP PHASE1:Mm9::chr11:96140694..96140720,+#_2c808356ccd804cd36d69a04f78b05bep@chr11:96140694..96140720, +
4.54e-44FFCP PHASE2:Mm9::chr1:155698178..155698191,-#_2c808356ccd804cd36d69a04f78b05bep@chr1:155698178..155698191, -
4.54e-44FFCP PHASE1:Mm9::chrX:130496166..130496188,-#_2c808356ccd804cd36d69a04f78b05bep@chrX:130496166..130496188, -
4.54e-44FFCP PHASE2:Mm9::chrX:20219008..20219045,+#_2c808356ccd804cd36d69a04f78b05bep@chrX:20219008..20219045, +
4.54e-44FFCP PHASE1:Mm9::chr14:51677141..51677148,-#_2c808356ccd804cd36d69a04f78b05bep7@Rnase12
4.54e-44FFCP PHASE2:Mm9::chr9:26599476..26599505,-#_2c808356ccd804cd36d69a04f78b05bep3@Glb1l2
4.54e-44FFCP PHASE2:Mm9::chr5:35930667..35930691,+#_2c808356ccd804cd36d69a04f78b05bep@chr5:35930667..35930691, +
4.54e-44FFCP PHASE2:Mm9::chrX:160347529..160347538,+#_2c808356ccd804cd36d69a04f78b05bep@chrX:160347529..160347538, +
4.54e-44FFCP PHASE1:Mm9::chr2:152290340..152290344,-#_2c808356ccd804cd36d69a04f78b05bep2@Defb23
4.54e-44FFCP PHASE1:Mm9::chr15:75329148..75329155,+#_2c808356ccd804cd36d69a04f78b05bep@chr15:75329148..75329155, +
4.54e-44FFCP PHASE2:Mm9::chr17:35249011..35249020,-#_2c808356ccd804cd36d69a04f78b05bep@chr17:35249011..35249020, -
4.54e-44FFCP PHASE1:Mm9::chr8:23045782..23045791,+#_2c808356ccd804cd36d69a04f78b05bep@chr8:23045782..23045791, +
4.54e-44FFCP PHASE1:Mm9::chr1:89597818..89597827,+#_2c808356ccd804cd36d69a04f78b05bep@chr1:89597818..89597827, +
4.54e-44FFCP PHASE1:Mm9::chr11:59845404..59845416,-#_2c808356ccd804cd36d69a04f78b05bep@chr11:59845404..59845416, -
4.54e-44FFCP PHASE1:Mm9::chr10:85390145..85390153,+#_2c808356ccd804cd36d69a04f78b05bep@chr10:85390145..85390153, +
4.54e-44FFCP PHASE2:Mm9::chr11:53937918..53937922,+#_2c808356ccd804cd36d69a04f78b05bep7@P4ha2
4.54e-44FFCP PHASE1:Mm9::chr1:156048695..156048707,+#_2c808356ccd804cd36d69a04f78b05bep@chr1:156048695..156048707, +
4.54e-44FFCP PHASE1:Mm9::chr16:23308182..23308185,+#_2c808356ccd804cd36d69a04f78b05bep@chr16:23308182..23308185, +
4.54e-44FFCP PHASE1:Mm9::chr14:69116075..69116107,-#_2c808356ccd804cd36d69a04f78b05bep@chr14:69116075..69116107, -
4.54e-44FFCP PHASE2:Mm9::chr14:67453354..67453365,-#_2c808356ccd804cd36d69a04f78b05bep@chr14:67453354..67453365, -
4.54e-44FFCP PHASE2:Mm9::chr13:21380670..21380678,-#_2c808356ccd804cd36d69a04f78b05bep@chr13:21380670..21380678, -
4.54e-44FFCP PHASE2:Mm9::chr2:74440187..74440209,-#_2c808356ccd804cd36d69a04f78b05bep@chr2:74440187..74440209, -
4.54e-44FFCP PHASE2:Mm9::chr8:96014490..96014496,+#_2c808356ccd804cd36d69a04f78b05bep@chr8:96014490..96014496, +
4.54e-44FFCP PHASE1:Mm9::chr6:49817766..49817772,-#_2c808356ccd804cd36d69a04f78b05bep@chr6:49817766..49817772, -
4.54e-44FFCP PHASE1:Mm9::chr3:103650758..103650778,+#_2c808356ccd804cd36d69a04f78b05bep@chr3:103650758..103650778, +
4.54e-44FFCP PHASE2:Mm9::chrX:156829476..156829504,+#_2c808356ccd804cd36d69a04f78b05bep@chrX:156829476..156829504, +
4.54e-44FFCP PHASE2:Mm9::chr5:110773795..110773801,+#_2c808356ccd804cd36d69a04f78b05bep@chr5:110773795..110773801, +
4.54e-44FFCP PHASE1:Mm9::chr1:87922778..87922788,+#_2c808356ccd804cd36d69a04f78b05bep@chr1:87922778..87922788, +
4.54e-44FFCP PHASE2:Mm9::chr9:26719400..26719404,-#_2c808356ccd804cd36d69a04f78b05bep@chr9:26719400..26719404, -
4.54e-44FFCP PHASE2:Mm9::chr1:90155951..90155962,+#_2c808356ccd804cd36d69a04f78b05bep@chr1:90155951..90155962, +
4.54e-44FFCP PHASE1:Mm9::chr2:152388977..152388983,+#_2c808356ccd804cd36d69a04f78b05bep@chr2:152388977..152388983, +
4.54e-44FFCP PHASE2:Mm9::chr1:18213651..18213663,-#_2c808356ccd804cd36d69a04f78b05bep1@Defb44-ps
4.54e-44FFCP PHASE1:Mm9::chr13:46041606..46041640,-#_2c808356ccd804cd36d69a04f78b05bep@chr13:46041606..46041640, -
4.54e-44FFCP PHASE2:Mm9::chr12:16664775..16664784,+#_2c808356ccd804cd36d69a04f78b05bep@chr12:16664775..16664784, +
4.54e-44FFCP PHASE1:Mm9::chr2:164479340..164479350,+#_2c808356ccd804cd36d69a04f78b05bep@chr2:164479340..164479350, +
4.54e-44FFCP PHASE1:Mm9::chr1:155738967..155738974,+#_2c808356ccd804cd36d69a04f78b05bep@chr1:155738967..155738974, +
4.54e-44FFCP PHASE2:Mm9::chr2:148676859..148676866,-#_2c808356ccd804cd36d69a04f78b05bep5@9230104L09Rik
4.54e-44FFCP PHASE1:Mm9::chr9:26731771..26731780,-#_2c808356ccd804cd36d69a04f78b05bep@chr9:26731771..26731780, -
4.54e-44FFCP PHASE2:Mm9::chrX:164787162..164787188,-#_2c808356ccd804cd36d69a04f78b05bep@chrX:164787162..164787188, -
4.54e-44FFCP PHASE1:Mm9::chr19:17585885..17585901,-#_2c808356ccd804cd36d69a04f78b05bep@chr19:17585885..17585901, -
4.54e-44FFCP PHASE2:Mm9::chr18:62775330..62775347,-#_2c808356ccd804cd36d69a04f78b05bep@chr18:62775330..62775347, -
4.54e-44FFCP PHASE2:Mm9::chr9:70761931..70761971,+#_2c808356ccd804cd36d69a04f78b05bep@chr9:70761931..70761971, +
4.54e-44FFCP PHASE2:Mm9::chr1:156048695..156048707,+#_2c808356ccd804cd36d69a04f78b05bep@chr1:156048695..156048707, +
4.54e-44FFCP PHASE1:Mm9::chr8:19141447..19141469,+#_2c808356ccd804cd36d69a04f78b05bep@chr8:19141447..19141469, +
4.54e-44FFCP PHASE2:Mm9::chrX:50280126..50280140,+#_2c808356ccd804cd36d69a04f78b05bep@chrX:50280126..50280140, +
4.54e-44FFCP PHASE2:Mm9::chr6:18338054..18338077,-#_2c808356ccd804cd36d69a04f78b05bep@chr6:18338054..18338077, -
4.54e-44FFCP PHASE1:Mm9::chr18:44264128..44264135,+#_2c808356ccd804cd36d69a04f78b05bep5@Spink12
4.54e-44FFCP PHASE2:Mm9::chr2:160573108..160573123,+#_2c808356ccd804cd36d69a04f78b05bep@chr2:160573108..160573123, +
4.54e-44FFCP PHASE2:Mm9::chr8:19141429..19141440,+#_2c808356ccd804cd36d69a04f78b05bep@chr8:19141429..19141440, +
4.54e-44FFCP PHASE1:Mm9::chr13:21385325..21385329,-#_2c808356ccd804cd36d69a04f78b05bep@chr13:21385325..21385329, -
4.54e-44FFCP PHASE2:Mm9::chr5:31379845..31379855,+#_2c808356ccd804cd36d69a04f78b05bep@chr5:31379845..31379855, +
4.54e-44FFCP PHASE1:Mm9::chr5:77645280..77645295,-#_2c808356ccd804cd36d69a04f78b05bep@chr5:77645280..77645295, -
4.54e-44FFCP PHASE2:Mm9::chr16:25752228..25752237,+#_2c808356ccd804cd36d69a04f78b05bep@chr16:25752228..25752237, +
4.54e-44FFCP PHASE1:Mm9::chr14:103746280..103746298,+#_2c808356ccd804cd36d69a04f78b05bep@chr14:103746280..103746298, +
4.54e-44FFCP PHASE2:Mm9::chr2:164480465..164480471,-#_2c808356ccd804cd36d69a04f78b05bep2@Wfdc9
4.54e-44FFCP PHASE1:Mm9::chrX:75798132..75798152,-#_2c808356ccd804cd36d69a04f78b05bep@chrX:75798132..75798152, -

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