Personal tools

CL:0002024: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{CL
{{CL
|id=CL:0002024
|alt_id=
|name=Kit-positive megakaryocyte progenitor cell
|namespace=efo
|def="A megakaryocyte progenitor cell that is Kit-positive, CD41-positive, CD9-positive, Sca-1-negative, IL7ralpha-negative, CD150-negative, and Fcgamma receptor II/III-low." [GOC:ak, GOC:tfm, PMID:16951553]
|xref=
|is_a=CL:0000553
|synonym=
|comment=Markers are associated with mouse cells.
|comment=Markers are associated with mouse cells.
|alt_id=
|disjoint_from=
|union_of=
|created_by=tmeehan
|created_by=tmeehan
|obo_creation_date=2010-04-26T02:39:15Z
|def="A megakaryocyte progenitor cell that is Kit-positive, CD41-positive, CD9-positive, Sca-1-negative, IL7ralpha-negative, CD150-negative, and Fcgamma receptor II/III-low." [GOC:ak, GOC:tfm, PMID:16951553]
|subset=
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=CL:0002006
|develops_from=CL:0002006
|disjoint_from=
|has_quality=
|has_quality=
|id=CL:0002024
|is_a=CL:0000553
|is_obsolete=
|located_in=
|located_in=
|name=Kit-positive megakaryocyte progenitor cell
|namespace=FANTOM
|obo_creation_date=2010-04-26T02:39:15Z
|part_of=
|part_of=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl;;IAO:0000412 http://purl.obolibrary.org/obo/efo.obo.owl
|is_obsolete=
|preceded_by=
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl;;IAO:0000412 http://purl.obolibrary.org/obo/efo.owl
|subset=
|synonym=
|union_of=
|xref=
}}
}}

Latest revision as of 16:39, 12 September 2014

Name:Kit-positive megakaryocyte progenitor cell
Namespace:FANTOM
Definition:"A megakaryocyte progenitor cell that is Kit-positive, CD41-positive, CD9-positive, Sca-1-negative, IL7ralpha-negative, CD150-negative, and Fcgamma receptor II/III-low." [GOC:ak, GOC:tfm, PMID:16951553]
Comments:Markers are associated with mouse cells.
Created by:tmeehan
Creation date:2010-04-26T02:39:15Z


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:CL:0000553(megakaryocyte progenitor cell)
develops_from:CL:0002006(Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell)



Children


develops from:CL:0002027 (CD9-positive, CD41-positive megakaryocyte cell)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.



Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002024 (Kit-positive megakaryocyte progenitor cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.58e-86FFCP PHASE2:Mm9::chr11:102210718..102210728,-#_eb9471afc42e823d5762b91d5ffc7fcep@chr11:102210718..102210728, -
1.58e-86FFCP PHASE1:Mm9::chr11:102210718..102210728,-#_eb9471afc42e823d5762b91d5ffc7fcep@chr11:102210718..102210728, -
1.33e-65FFCP PHASE2:Mm9::chr10:40941203..40941208,-#_64ea2de56969b69b05e00998dc42231ep@chr10:40941203..40941208, -
1.33e-65FFCP PHASE1:Mm9::chr8:123049251..123049271,+#_64ea2de56969b69b05e00998dc42231ep@chr8:123049251..123049271, +
1.33e-65FFCP PHASE1:Mm9::chr18:71090441..71090442,+#_64ea2de56969b69b05e00998dc42231ep@chr18:71090441..71090442, +
1.33e-65FFCP PHASE2:Mm9::chr18:71090441..71090442,+#_64ea2de56969b69b05e00998dc42231ep@chr18:71090441..71090442, +
1.33e-65FFCP PHASE2:Mm9::chr8:123049251..123049271,+#_64ea2de56969b69b05e00998dc42231ep@chr8:123049251..123049271, +
1.33e-65FFCP PHASE1:Mm9::chr10:40941203..40941208,-#_64ea2de56969b69b05e00998dc42231ep@chr10:40941203..40941208, -
6.04e-65FFCP PHASE1:Mm9::chr18:68558585..68558589,+#_6d10eed3ab140122a67dc750cb41a066p@chr18:68558585..68558589, +
6.04e-65FFCP PHASE2:Mm9::chr18:68558585..68558589,+#_6d10eed3ab140122a67dc750cb41a066p@chr18:68558585..68558589, +
3.28e-58FFCP PHASE1:Mm9::chr18:87173747..87173751,+#_6bbcf561f4e1d7282a18d5ef5d7daaadp@chr18:87173747..87173751, +
3.28e-58FFCP PHASE1:Mm9::chr11:32196491..32196492,+#_6bbcf561f4e1d7282a18d5ef5d7daaadp1@Hba-a2
3.28e-58FFCP PHASE1:Mm9::chr10:36360889..36360893,+#_6bbcf561f4e1d7282a18d5ef5d7daaadp@chr10:36360889..36360893, +
3.28e-58FFCP PHASE2:Mm9::chrX:136488391..136488392,+#_6bbcf561f4e1d7282a18d5ef5d7daaadp@chrX:136488391..136488392, +
3.28e-58FFCP PHASE2:Mm9::chr18:87173747..87173751,+#_6bbcf561f4e1d7282a18d5ef5d7daaadp@chr18:87173747..87173751, +
3.28e-58FFCP PHASE2:Mm9::chr12:75309346..75309347,+#_6bbcf561f4e1d7282a18d5ef5d7daaadp@chr12:75309346..75309347, +
3.28e-58FFCP PHASE2:Mm9::chr3:7133293..7133296,+#_6bbcf561f4e1d7282a18d5ef5d7daaadp@chr3:7133293..7133296, +
3.28e-58FFCP PHASE2:Mm9::chr2:114025951..114025954,+#_6bbcf561f4e1d7282a18d5ef5d7daaadp@chr2:114025951..114025954, +
3.28e-58FFCP PHASE2:Mm9::chr18:37563707..37563712,+#_6bbcf561f4e1d7282a18d5ef5d7daaadp@chr18:37563707..37563712, +
3.28e-58FFCP PHASE2:Mm9::chr1:136173181..136173183,+#_6bbcf561f4e1d7282a18d5ef5d7daaadp@chr1:136173181..136173183, +
3.28e-58FFCP PHASE2:Mm9::chr8:23515716..23515717,+#_6bbcf561f4e1d7282a18d5ef5d7daaadp@chr8:23515716..23515717, +
3.28e-58FFCP PHASE2:Mm9::chr11:32196491..32196492,+#_6bbcf561f4e1d7282a18d5ef5d7daaadp1@Hba-a2
3.28e-58FFCP PHASE1:Mm9::chr2:95321604..95321605,+#_6bbcf561f4e1d7282a18d5ef5d7daaadp@chr2:95321604..95321605, +
3.28e-58FFCP PHASE2:Mm9::chr13:94937146..94937147,+#_6bbcf561f4e1d7282a18d5ef5d7daaadp@chr13:94937146..94937147, +
3.28e-58FFCP PHASE1:Mm9::chr12:75309346..75309347,+#_6bbcf561f4e1d7282a18d5ef5d7daaadp@chr12:75309346..75309347, +
3.28e-58FFCP PHASE2:Mm9::chr15:15029103..15029107,+#_6bbcf561f4e1d7282a18d5ef5d7daaadp@chr15:15029103..15029107, +
3.28e-58FFCP PHASE1:Mm9::chrX:136488391..136488392,+#_6bbcf561f4e1d7282a18d5ef5d7daaadp@chrX:136488391..136488392, +
3.28e-58FFCP PHASE1:Mm9::chr4:5713820..5713822,+#_6bbcf561f4e1d7282a18d5ef5d7daaadp@chr4:5713820..5713822, +
3.28e-58FFCP PHASE1:Mm9::chr8:23515716..23515717,+#_6bbcf561f4e1d7282a18d5ef5d7daaadp@chr8:23515716..23515717, +
3.28e-58FFCP PHASE2:Mm9::chr2:95321604..95321605,+#_6bbcf561f4e1d7282a18d5ef5d7daaadp@chr2:95321604..95321605, +
3.28e-58FFCP PHASE1:Mm9::chr3:7133293..7133296,+#_6bbcf561f4e1d7282a18d5ef5d7daaadp@chr3:7133293..7133296, +
3.28e-58FFCP PHASE1:Mm9::chr2:114025951..114025954,+#_6bbcf561f4e1d7282a18d5ef5d7daaadp@chr2:114025951..114025954, +
3.28e-58FFCP PHASE2:Mm9::chr10:36360889..36360893,+#_6bbcf561f4e1d7282a18d5ef5d7daaadp@chr10:36360889..36360893, +
3.28e-58FFCP PHASE2:Mm9::chr4:5713820..5713822,+#_6bbcf561f4e1d7282a18d5ef5d7daaadp@chr4:5713820..5713822, +
3.28e-58FFCP PHASE1:Mm9::chr13:94937146..94937147,+#_6bbcf561f4e1d7282a18d5ef5d7daaadp@chr13:94937146..94937147, +
3.28e-58FFCP PHASE1:Mm9::chr18:37563707..37563712,+#_6bbcf561f4e1d7282a18d5ef5d7daaadp@chr18:37563707..37563712, +
3.28e-58FFCP PHASE2:Mm9::chr1:63149723..63149724,+#_6bbcf561f4e1d7282a18d5ef5d7daaadp@chr1:63149723..63149724, +
3.28e-58FFCP PHASE1:Mm9::chr1:63149723..63149724,+#_6bbcf561f4e1d7282a18d5ef5d7daaadp@chr1:63149723..63149724, +
3.28e-58FFCP PHASE1:Mm9::chr15:15029103..15029107,+#_6bbcf561f4e1d7282a18d5ef5d7daaadp@chr15:15029103..15029107, +
3.28e-58FFCP PHASE1:Mm9::chr1:136173181..136173183,+#_6bbcf561f4e1d7282a18d5ef5d7daaadp@chr1:136173181..136173183, +
4.9e-53FFCP PHASE2:Mm9::chr11:5474110..5474118,+#_8576cd251e7ff805fcf4ff441f457bc1p4@Ankrd36
4.9e-53FFCP PHASE1:Mm9::chr11:5474110..5474118,+#_8576cd251e7ff805fcf4ff441f457bc1p4@Ankrd36
7.35e-53FFCP PHASE1:Mm9::chr15:24185318..24185321,+#_1f07207363406f6f08ebfb4aa76cc44ap@chr15:24185318..24185321, +
7.35e-53FFCP PHASE2:Mm9::chr15:24185318..24185321,+#_1f07207363406f6f08ebfb4aa76cc44ap@chr15:24185318..24185321, +
3.27e-44FFCP PHASE1:Mm9::chr9:3034197..3034209,+#_47338fd720660142efb1a45e3b888cfap1@ENSMUST00000170073
3.27e-44FFCP PHASE2:Mm9::chr9:3034197..3034209,+#_47338fd720660142efb1a45e3b888cfap1@ENSMUST00000170073
6.41e-44FFCP PHASE2:Mm9::chr7:116746256..116746261,-#_c634675a6d70d909c19841d481de53c2p@chr7:116746256..116746261, -
6.41e-44FFCP PHASE1:Mm9::chr7:116746256..116746261,-#_c634675a6d70d909c19841d481de53c2p@chr7:116746256..116746261, -
8.97e-44FFCP PHASE1:Mm9::chr3:153515447..153515449,-#_8f5d9d9809c49e987f72a6ba5e922877p3@2510003D18Rik
8.97e-44FFCP PHASE2:Mm9::chr3:153515447..153515449,-#_8f5d9d9809c49e987f72a6ba5e922877p3@2510003D18Rik
1.7e-39FFCP PHASE1:Mm9::chr17:84975629..84975633,+#_f499dbfeae3e5950ed5ae12a442a1348p@chr17:84975629..84975633, +
1.7e-39FFCP PHASE2:Mm9::chr18:10715046..10715048,+#_f499dbfeae3e5950ed5ae12a442a1348p@chr18:10715046..10715048, +
1.7e-39FFCP PHASE2:Mm9::chr14:39440035..39440038,+#_f499dbfeae3e5950ed5ae12a442a1348p@chr14:39440035..39440038, +
1.7e-39FFCP PHASE1:Mm9::chr18:55201820..55201826,+#_f499dbfeae3e5950ed5ae12a442a1348p@chr18:55201820..55201826, +
1.7e-39FFCP PHASE2:Mm9::chr17:84975629..84975633,+#_f499dbfeae3e5950ed5ae12a442a1348p@chr17:84975629..84975633, +
1.7e-39FFCP PHASE1:Mm9::chr14:39440035..39440038,+#_f499dbfeae3e5950ed5ae12a442a1348p@chr14:39440035..39440038, +
1.7e-39FFCP PHASE1:Mm9::chr13:89417961..89417962,-#_f499dbfeae3e5950ed5ae12a442a1348p@chr13:89417961..89417962, -
1.7e-39FFCP PHASE1:Mm9::chr18:10715046..10715048,+#_f499dbfeae3e5950ed5ae12a442a1348p@chr18:10715046..10715048, +
1.7e-39FFCP PHASE2:Mm9::chr18:55201820..55201826,+#_f499dbfeae3e5950ed5ae12a442a1348p@chr18:55201820..55201826, +
1.7e-39FFCP PHASE2:Mm9::chr13:89417961..89417962,-#_f499dbfeae3e5950ed5ae12a442a1348p@chr13:89417961..89417962, -
4.15e-39FFCP PHASE2:Mm9::chr15:77338698..77338700,+#_c55284209efa2e38bada32a15ac852efp1@Apol11a
4.15e-39FFCP PHASE1:Mm9::chr15:77338698..77338700,+#_c55284209efa2e38bada32a15ac852efp1@Apol11a
1.56e-38FFCP PHASE2:Mm9::chr11:5474159..5474170,+#_a2574ada5a73d8006a5d97097ea6be24p2@Ankrd36
1.56e-38FFCP PHASE1:Mm9::chr11:5474159..5474170,+#_a2574ada5a73d8006a5d97097ea6be24p2@Ankrd36
2.09e-38FFCP PHASE2:Mm9::chr17:39985363..39985372,+#_b736e4cb9c38a6b9746998b1cff311ffp@chr17:39985363..39985372, +
2.09e-38FFCP PHASE1:Mm9::chr17:39985363..39985372,+#_b736e4cb9c38a6b9746998b1cff311ffp@chr17:39985363..39985372, +
2.79e-38FFCP PHASE1:Mm9::chr5:133715438..133715442,+#_25b0b5afb00e0a5eddfb9020f65d2e9fp@chr5:133715438..133715442, +
2.79e-38FFCP PHASE2:Mm9::chr5:133715438..133715442,+#_25b0b5afb00e0a5eddfb9020f65d2e9fp@chr5:133715438..133715442, +
4.98e-38FFCP PHASE1:Mm9::chr12:114568638..114568651,-#_5d0fc990cfdc4edc13a52d93bdd1a9e6p@chr12:114568638..114568651, -
4.98e-38FFCP PHASE2:Mm9::chr12:114568638..114568651,-#_5d0fc990cfdc4edc13a52d93bdd1a9e6p@chr12:114568638..114568651, -
2.1e-37FFCP PHASE1:Mm9::chr12:114567912..114567927,-#_36c7d70a6963917c2d3a7e532807304cp@chr12:114567912..114567927, -
2.1e-37FFCP PHASE2:Mm9::chr12:114567912..114567927,-#_36c7d70a6963917c2d3a7e532807304cp@chr12:114567912..114567927, -
2.8e-37FFCP PHASE2:Mm9::chr4:59686875..59686885,+#_707811187a634065bd05108cc6d01c58p@chr4:59686875..59686885, +
2.8e-37FFCP PHASE1:Mm9::chr4:59686875..59686885,+#_707811187a634065bd05108cc6d01c58p@chr4:59686875..59686885, +
3.67e-34FFCP PHASE1:Mm9::chr10:40941126..40941138,-#_55fc1a61f6ccfc323be4ff9df9604108p@chr10:40941126..40941138, -
3.67e-34FFCP PHASE2:Mm9::chr10:40941126..40941138,-#_55fc1a61f6ccfc323be4ff9df9604108p@chr10:40941126..40941138, -
6.12e-34FFCP PHASE1:Mm9::chr6:17693582..17693593,+#_bd75bd26ee9e5d7a656aaa70922e7e50p19@St7
6.12e-34FFCP PHASE2:Mm9::chr18:80476177..80476182,+#_bd75bd26ee9e5d7a656aaa70922e7e50p@chr18:80476177..80476182, +
6.12e-34FFCP PHASE1:Mm9::chr18:80476177..80476182,+#_bd75bd26ee9e5d7a656aaa70922e7e50p@chr18:80476177..80476182, +
6.12e-34FFCP PHASE2:Mm9::chr6:17693582..17693593,+#_bd75bd26ee9e5d7a656aaa70922e7e50p19@St7
1.69e-33FFCP PHASE1:Mm9::chr9:106302034..106302036,-#_1fd7f2c70ac3fcaf780c275fed6be728p@chr9:106302034..106302036, -
1.69e-33FFCP PHASE2:Mm9::chr9:106302034..106302036,-#_1fd7f2c70ac3fcaf780c275fed6be728p@chr9:106302034..106302036, -
1.16e-30FFCP PHASE2:Mm9::chr19:4127266..4127286,-#_412bd2690d1462b3cec02e815b77f865p@chr19:4127266..4127286, -
1.16e-30FFCP PHASE1:Mm9::chr19:4127266..4127286,-#_412bd2690d1462b3cec02e815b77f865p@chr19:4127266..4127286, -
1.83e-30FFCP PHASE1:Mm9::chr11:3001954..3001964,+#_85fe6898511511d33d31e742a80a1acbp@chr11:3001954..3001964, +
1.83e-30FFCP PHASE1:Mm9::chr10:50076400..50076404,+#_85fe6898511511d33d31e742a80a1acbp@chr10:50076400..50076404, +
1.83e-30FFCP PHASE2:Mm9::chr10:50076400..50076404,+#_85fe6898511511d33d31e742a80a1acbp@chr10:50076400..50076404, +
1.83e-30FFCP PHASE2:Mm9::chr11:3001954..3001964,+#_85fe6898511511d33d31e742a80a1acbp@chr11:3001954..3001964, +
2.3e-30FFCP PHASE1:Mm9::chr2:98503916..98503926,+#_0dbafa6797ea30b7e2f7f555b847d7a2p@chr2:98503916..98503926, +
2.3e-30FFCP PHASE2:Mm9::chr2:98503916..98503926,+#_0dbafa6797ea30b7e2f7f555b847d7a2p@chr2:98503916..98503926, +
2.89e-30FFCP PHASE1:Mm9::chr3:41343162..41343165,+#_1f2dee4d7d20a98f93c1cea848a10896p@chr3:41343162..41343165, +
2.89e-30FFCP PHASE2:Mm9::chr3:41343162..41343165,+#_1f2dee4d7d20a98f93c1cea848a10896p@chr3:41343162..41343165, +
3.62e-30FFCP PHASE1:Mm9::chr5:62179269..62179272,+#_24e1a51b934a6f5d949c365aa3e21f59p@chr5:62179269..62179272, +
3.62e-30FFCP PHASE2:Mm9::chr5:62179269..62179272,+#_24e1a51b934a6f5d949c365aa3e21f59p@chr5:62179269..62179272, +
4.03e-30FFCP PHASE1:Mm9::chr7:78374198..78374200,+#_2ecf6aadcf6e2f3952be8e6d739f8706p@chr7:78374198..78374200, +
4.03e-30FFCP PHASE1:Mm9::chr9:108276696..108276698,+#_2ecf6aadcf6e2f3952be8e6d739f8706p@chr9:108276696..108276698, +
4.03e-30FFCP PHASE2:Mm9::chr12:33892535..33892536,+#_2ecf6aadcf6e2f3952be8e6d739f8706p@chr12:33892535..33892536, +
4.03e-30FFCP PHASE2:Mm9::chr9:108276696..108276698,+#_2ecf6aadcf6e2f3952be8e6d739f8706p@chr9:108276696..108276698, +
4.03e-30FFCP PHASE1:Mm9::chr15:39568161..39568162,+#_2ecf6aadcf6e2f3952be8e6d739f8706p@chr15:39568161..39568162, +
4.03e-30FFCP PHASE1:Mm9::chr2:98503870..98503876,+#_2ecf6aadcf6e2f3952be8e6d739f8706p@chr2:98503870..98503876, +

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=CL:0002024&oldid=3275397"