CL:0002597: Difference between revisions
From FANTOM5_SSTAR
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|located_in= | |located_in= | ||
|name=smooth muscle cell of bladder | |name=smooth muscle cell of bladder | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date=2011-03-06T05:43:24Z | |obo_creation_date=2011-03-06T05:43:24Z | ||
|part_of=UBERON:0001255 | |part_of=UBERON:0001255 | ||
Latest revision as of 16:45, 12 September 2014
| Name: | smooth muscle cell of bladder | ||
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| Namespace: | FANTOM | ||
| Definition: | "A smooth muscle cell of the bladder." [GC:tfm] | ||
| Xrefs: |
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| Created by: | tmeehan | ||
| Creation date: | 2011-03-06T05:43:24Z |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:0000192(smooth muscle cell),CL:1001319(bladder cell) |
|---|---|
| part_of: | UBERON:0001255(urinary bladder) |
Children
| derives from: | FF:0000178 (human smooth muscle cell of bladder sample) |
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Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 11519-119H7 (Smooth Muscle Cells - Bladder, donor1)
- 11599-120H6
- 11680-122H6
Mouse (Mus musculus)
- 11519-119H7 (Smooth Muscle Cells - Bladder, donor1)
- 11599-120H6
- 11680-122H6
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002597 (smooth muscle cell of bladder), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
No analysis results for this cluster
