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{{DOID
{{DOID
|id=DOID:1325
|alt_id=
|name=bronchus cancer
|namespace=
|def=
|xref=
|is_a=DOID:1324
|synonym="malignant neoplasm of bronchus and lung, unspecified" EXACT [ICD9CM_2006:162.9];;"malignant neoplasm of bronchus or lung NOS (disorder)" EXACT [SNOMEDCT_2005_07_31:269465004];;"malignant neoplasm of bronchus or lung, unspecified (disorder)" EXACT [SNOMEDCT_2005_07_31:190092003]
|comment=
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|id=DOID:1325
|is_a=DOID:1324
|is_obsolete=
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|name=bronchus cancer
|namespace=FANTOM
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|property_value=IAO:0000412 file:/Users/cjm/Dropbox/fantom5/HumanDO.obo
|subset=
|synonym="malignant neoplasm of bronchus and lung, unspecified" EXACT [ICD9CM_2006:162.9];;"malignant neoplasm of bronchus or lung NOS (disorder)" EXACT [SNOMEDCT_2005_07_31:269465004];;"malignant neoplasm of bronchus or lung, unspecified (disorder)" EXACT [SNOMEDCT_2005_07_31:190092003]
|union_of=
|xref=ICD9CM:162.9;;SNOMEDCT_2010_1_31:187875007;;SNOMEDCT_2010_1_31:190092003;;SNOMEDCT_2010_1_31:269465004;;UMLS_CUI:C0348343
}}
}}

Latest revision as of 16:48, 12 September 2014

Name:bronchus cancer
Namespace:FANTOM
Xrefs:
links:

ICD9CM:162.9
SNOMEDCT_2010_1_31:187875007
SNOMEDCT_2010_1_31:190092003
SNOMEDCT_2010_1_31:269465004

UMLS_CUI:C0348343
Synonyms: "malignant neoplasm of bronchus and lung, unspecified" EXACT [ICD9CM_2006:162.9]
"malignant neoplasm of bronchus or lung NOS (disorder)" EXACT [SNOMEDCT_2005_07_31:269465004]
"malignant neoplasm of bronchus or lung, unspecified (disorder)" EXACT [SNOMEDCT_2005_07_31:190092003]

Ontology association<br>Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:DOID:1324(lung cancer)



Children


is a:DOID:3904 (bronchogenic carcinoma)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples

Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results

Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:1325 (bronchus cancer), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
4.76e-57FFCP PHASE1:Hg19::chr6:45399245..45399258,+#_ce48738c62d3333ff2f6d2b34f669c50p@chr6:45399245..45399258, +
4.76e-57FFCP PHASE1:Hg19::chr6:45399533..45399540,+#_ce48738c62d3333ff2f6d2b34f669c50p@chr6:45399533..45399540, +
4.76e-57FFCP PHASE2:Hg19::chr6:45405332..45405343,+#_ce48738c62d3333ff2f6d2b34f669c50p@chr6:45405332..45405343, +
4.76e-57FFCP PHASE2:Hg19::chr6:45399245..45399258,+#_ce48738c62d3333ff2f6d2b34f669c50p@chr6:45399245..45399258, +
4.76e-57FFCP PHASE1:Hg19::chr6:45405393..45405412,+#_ce48738c62d3333ff2f6d2b34f669c50p@chr6:45405393..45405412, +
4.76e-57FFCP PHASE1:Hg19::chr6:45399263..45399274,+#_ce48738c62d3333ff2f6d2b34f669c50p@chr6:45399263..45399274, +
4.76e-57FFCP PHASE2:Hg19::chr6:45399533..45399540,+#_ce48738c62d3333ff2f6d2b34f669c50p@chr6:45399533..45399540, +
4.76e-57FFCP PHASE2:Hg19::chr6:45405393..45405412,+#_ce48738c62d3333ff2f6d2b34f669c50p@chr6:45405393..45405412, +
4.76e-57FFCP PHASE1:Hg19::chr6:125378873..125378876,+#_ce48738c62d3333ff2f6d2b34f669c50p@chr6:125378873..125378876, +
4.76e-57FFCP PHASE2:Hg19::chr6:45399263..45399274,+#_ce48738c62d3333ff2f6d2b34f669c50p@chr6:45399263..45399274, +
4.76e-57FFCP PHASE2:Hg19::chr6:125378873..125378876,+#_ce48738c62d3333ff2f6d2b34f669c50p@chr6:125378873..125378876, +
4.76e-57FFCP PHASE1:Hg19::chr6:45399294..45399301,+#_ce48738c62d3333ff2f6d2b34f669c50p@chr6:45399294..45399301, +
4.76e-57FFCP PHASE2:Hg19::chr6:45399294..45399301,+#_ce48738c62d3333ff2f6d2b34f669c50p@chr6:45399294..45399301, +
4.76e-57FFCP PHASE1:Hg19::chr6:45405332..45405343,+#_ce48738c62d3333ff2f6d2b34f669c50p@chr6:45405332..45405343, +
1.49e-38FFCP PHASE1:Hg19::chr6:73786620..73786627,+#_b5aa4a1e098d01cde551406e1db2f153p@chr6:73786620..73786627, +
1.49e-38FFCP PHASE2:Hg19::chr6:45399422..45399430,+#_b5aa4a1e098d01cde551406e1db2f153p@chr6:45399422..45399430, +
1.49e-38FFCP PHASE2:Hg19::chr6:73786620..73786627,+#_b5aa4a1e098d01cde551406e1db2f153p@chr6:73786620..73786627, +
1.49e-38FFCP PHASE1:Hg19::chr8:40525350..40525354,-#_b5aa4a1e098d01cde551406e1db2f153p@chr8:40525350..40525354, -
1.49e-38FFCP PHASE2:Hg19::chr8:40525350..40525354,-#_b5aa4a1e098d01cde551406e1db2f153p@chr8:40525350..40525354, -
1.49e-38FFCP PHASE1:Hg19::chr6:45399724..45399733,+#_b5aa4a1e098d01cde551406e1db2f153p@chr6:45399724..45399733, +
1.49e-38FFCP PHASE1:Hg19::chr6:73786593..73786601,+#_b5aa4a1e098d01cde551406e1db2f153p@chr6:73786593..73786601, +
1.49e-38FFCP PHASE1:Hg19::chr6:45399422..45399430,+#_b5aa4a1e098d01cde551406e1db2f153p@chr6:45399422..45399430, +
1.49e-38FFCP PHASE2:Hg19::chr6:45399724..45399733,+#_b5aa4a1e098d01cde551406e1db2f153p@chr6:45399724..45399733, +
1.49e-38FFCP PHASE2:Hg19::chr6:73786593..73786601,+#_b5aa4a1e098d01cde551406e1db2f153p@chr6:73786593..73786601, +
1.8e-38FFCP PHASE1:Hg19::chr18:10085554..10085562,+#_56a3faba1a472007fb8d88e1c18523d7p@chr18:10085554..10085562, +
1.8e-38FFCP PHASE2:Hg19::chr18:10085554..10085562,+#_56a3faba1a472007fb8d88e1c18523d7p@chr18:10085554..10085562, +
2.18e-38FFCP PHASE1:Hg19::chr2:233352641..233352675,+#_77e220dbff3f2a7369f3b5ad85083a57p@chr2:233352641..233352675, +
2.18e-38FFCP PHASE2:Hg19::chr2:233352641..233352675,+#_77e220dbff3f2a7369f3b5ad85083a57p@chr2:233352641..233352675, +
1.14e-32FFCP PHASE1:Hg19::chr14:106916169..106916203,+#_5e7202742a66b7b462faf1dac721969ep@chr14:106916169..106916203, +
1.14e-32FFCP PHASE2:Hg19::chr14:106916169..106916203,+#_5e7202742a66b7b462faf1dac721969ep@chr14:106916169..106916203, +
1.78e-29FFCP PHASE2:Hg19::chr8:98066259..98066270,-#_1b95cd093abad85ff1daec551ffc50b7p@chr8:98066259..98066270, -
1.78e-29FFCP PHASE1:Hg19::chr1:168756151..168756165,+#_1b95cd093abad85ff1daec551ffc50b7p2@ENST00000420691
1.78e-29FFCP PHASE2:Hg19::chr6:154858693..154858698,+#_1b95cd093abad85ff1daec551ffc50b7p@chr6:154858693..154858698, +
1.78e-29FFCP PHASE2:Hg19::chr1:144618112..144618116,+#_1b95cd093abad85ff1daec551ffc50b7p4@NBPF8
1.78e-29FFCP PHASE1:Hg19::chr2:103235120..103235130,+#_1b95cd093abad85ff1daec551ffc50b7p@chr2:103235120..103235130, +
1.78e-29FFCP PHASE1:Hg19::chr19:46763803..46763808,-#_1b95cd093abad85ff1daec551ffc50b7p@chr19:46763803..46763808, -
1.78e-29FFCP PHASE1:Hg19::chr17:79974020..79974025,+#_1b95cd093abad85ff1daec551ffc50b7p@chr17:79974020..79974025, +
1.78e-29FFCP PHASE2:Hg19::chr2:192805223..192805230,+#_1b95cd093abad85ff1daec551ffc50b7p@chr2:192805223..192805230, +
1.78e-29FFCP PHASE1:Hg19::chr9:17457123..17457129,+#_1b95cd093abad85ff1daec551ffc50b7p@chr9:17457123..17457129, +
1.78e-29FFCP PHASE2:Hg19::chr11:41519057..41519065,-#_1b95cd093abad85ff1daec551ffc50b7p@chr11:41519057..41519065, -
1.78e-29FFCP PHASE1:Hg19::chr8:97961449..97961460,-#_1b95cd093abad85ff1daec551ffc50b7p@chr8:97961449..97961460, -
1.78e-29FFCP PHASE1:Hg19::chr5:146890999..146891017,-#_1b95cd093abad85ff1daec551ffc50b7p@chr5:146890999..146891017, -
1.78e-29FFCP PHASE1:Hg19::chr2:238385078..238385087,-#_1b95cd093abad85ff1daec551ffc50b7p@chr2:238385078..238385087, -
1.78e-29FFCP PHASE2:Hg19::chr8:72275738..72275747,-#_1b95cd093abad85ff1daec551ffc50b7p@chr8:72275738..72275747, -
1.78e-29FFCP PHASE2:Hg19::chr8:116215608..116215615,+#_1b95cd093abad85ff1daec551ffc50b7p@chr8:116215608..116215615, +
1.78e-29FFCP PHASE1:Hg19::chr12:54535470..54535475,+#_1b95cd093abad85ff1daec551ffc50b7p@chr12:54535470..54535475, +
1.78e-29FFCP PHASE2:Hg19::chr2:222160756..222160761,+#_1b95cd093abad85ff1daec551ffc50b7p@chr2:222160756..222160761, +
1.78e-29FFCP PHASE2:Hg19::chr18:10085817..10085825,+#_1b95cd093abad85ff1daec551ffc50b7p@chr18:10085817..10085825, +
1.78e-29FFCP PHASE2:Hg19::chr14:59113338..59113345,+#_1b95cd093abad85ff1daec551ffc50b7p@chr14:59113338..59113345, +
1.78e-29FFCP PHASE1:Hg19::chr7:79839919..79839924,+#_1b95cd093abad85ff1daec551ffc50b7p@chr7:79839919..79839924, +
1.78e-29FFCP PHASE1:Hg19::chr14:36536932..36536937,-#_1b95cd093abad85ff1daec551ffc50b7p@chr14:36536932..36536937, -
1.78e-29FFCP PHASE2:Hg19::chr10:65821760..65821780,+#_1b95cd093abad85ff1daec551ffc50b7p@chr10:65821760..65821780, +
1.78e-29FFCP PHASE1:Hg19::chr2:202413051..202413061,-#_1b95cd093abad85ff1daec551ffc50b7p@chr2:202413051..202413061, -
1.78e-29FFCP PHASE2:Hg19::chr4:6324309..6324314,-#_1b95cd093abad85ff1daec551ffc50b7p43@PPP2R2C
1.78e-29FFCP PHASE2:Hg19::chr18:6928495..6928520,-#_1b95cd093abad85ff1daec551ffc50b7p2@LOC400643
1.78e-29FFCP PHASE2:Hg19::chr12:84664662..84664670,+#_1b95cd093abad85ff1daec551ffc50b7p3@ENST00000547882
1.78e-29FFCP PHASE1:Hg19::chr20:45418126..45418131,-#_1b95cd093abad85ff1daec551ffc50b7p@chr20:45418126..45418131, -
1.78e-29FFCP PHASE2:Hg19::chr9:125306070..125306106,+#_1b95cd093abad85ff1daec551ffc50b7p@chr9:125306070..125306106, +
1.78e-29FFCP PHASE2:Hg19::chr17:13574618..13574636,-#_1b95cd093abad85ff1daec551ffc50b7p@chr17:13574618..13574636, -
1.78e-29FFCP PHASE1:Hg19::chr8:82275651..82275662,+#_1b95cd093abad85ff1daec551ffc50b7p@chr8:82275651..82275662, +
1.78e-29FFCP PHASE1:Hg19::chr2:97626550..97626562,-#_1b95cd093abad85ff1daec551ffc50b7p@chr2:97626550..97626562, -
1.78e-29FFCP PHASE2:Hg19::chr2:220594730..220594748,+#_1b95cd093abad85ff1daec551ffc50b7p2@ENST00000442416
1.78e-29FFCP PHASE2:Hg19::chr10:129704382..129704389,+#_1b95cd093abad85ff1daec551ffc50b7p@chr10:129704382..129704389, +
1.78e-29FFCP PHASE1:Hg19::chr14:25326297..25326305,-#_1b95cd093abad85ff1daec551ffc50b7p@chr14:25326297..25326305, -
1.78e-29FFCP PHASE2:Hg19::chr4:169849979..169849990,-#_1b95cd093abad85ff1daec551ffc50b7p@chr4:169849979..169849990, -
1.78e-29FFCP PHASE1:Hg19::chr13:76755731..76755739,+#_1b95cd093abad85ff1daec551ffc50b7p@chr13:76755731..76755739, +
1.78e-29FFCP PHASE2:Hg19::chr8:97965705..97965721,-#_1b95cd093abad85ff1daec551ffc50b7p@chr8:97965705..97965721, -
1.78e-29FFCP PHASE1:Hg19::chr11:69640133..69640140,+#_1b95cd093abad85ff1daec551ffc50b7p@chr11:69640133..69640140, +
1.78e-29FFCP PHASE2:Hg19::chr6:998897..998898,-#_1b95cd093abad85ff1daec551ffc50b7p@chr6:998897..998898, -
1.78e-29FFCP PHASE2:Hg19::chr4:3838289..3838308,-#_1b95cd093abad85ff1daec551ffc50b7p@chr4:3838289..3838308, -
1.78e-29FFCP PHASE2:Hg19::chr12:79756320..79756329,-#_1b95cd093abad85ff1daec551ffc50b7p@chr12:79756320..79756329, -
1.78e-29FFCP PHASE2:Hg19::chr3:150914094..150914095,+#_1b95cd093abad85ff1daec551ffc50b7p@chr3:150914094..150914095, +
1.78e-29FFCP PHASE1:Hg19::chr8:72938203..72938230,+#_1b95cd093abad85ff1daec551ffc50b7p@chr8:72938203..72938230, +
1.78e-29FFCP PHASE1:Hg19::chr6:125547084..125547089,+#_1b95cd093abad85ff1daec551ffc50b7p@chr6:125547084..125547089, +
1.78e-29FFCP PHASE1:Hg19::chr2:97625602..97625628,-#_1b95cd093abad85ff1daec551ffc50b7p@chr2:97625602..97625628, -
1.78e-29FFCP PHASE1:Hg19::chr2:222160774..222160804,+#_1b95cd093abad85ff1daec551ffc50b7p@chr2:222160774..222160804, +
1.78e-29FFCP PHASE1:Hg19::chr19:54024499..54024503,+#_1b95cd093abad85ff1daec551ffc50b7p48@ZNF331
1.78e-29FFCP PHASE2:Hg19::chrX:48056224..48056233,-#_1b95cd093abad85ff1daec551ffc50b7p1@SSX5
1.78e-29FFCP PHASE2:Hg19::chr7:95766200..95766209,-#_1b95cd093abad85ff1daec551ffc50b7p@chr7:95766200..95766209, -
1.78e-29FFCP PHASE1:Hg19::chr11:31093041..31093047,-#_1b95cd093abad85ff1daec551ffc50b7p@chr11:31093041..31093047, -
1.78e-29FFCP PHASE2:Hg19::chr14:57127856..57127863,+#_1b95cd093abad85ff1daec551ffc50b7p@chr14:57127856..57127863, +
1.78e-29FFCP PHASE1:Hg19::chr2:138685510..138685520,-#_1b95cd093abad85ff1daec551ffc50b7p@chr2:138685510..138685520, -
1.78e-29FFCP PHASE1:Hg19::chr18:37331745..37331763,-#_1b95cd093abad85ff1daec551ffc50b7p@chr18:37331745..37331763, -
1.78e-29FFCP PHASE2:Hg19::chr4:157516018..157516023,+#_1b95cd093abad85ff1daec551ffc50b7p@chr4:157516018..157516023, +
1.78e-29FFCP PHASE1:Hg19::chr10:129704512..129704515,+#_1b95cd093abad85ff1daec551ffc50b7p@chr10:129704512..129704515, +
1.78e-29FFCP PHASE1:Hg19::chr8:98070371..98070384,-#_1b95cd093abad85ff1daec551ffc50b7p@chr8:98070371..98070384, -
1.78e-29FFCP PHASE1:Hg19::chr6:154858754..154858762,+#_1b95cd093abad85ff1daec551ffc50b7p@chr6:154858754..154858762, +
1.78e-29FFCP PHASE1:Hg19::chr5:28571958..28571968,-#_1b95cd093abad85ff1daec551ffc50b7p@chr5:28571958..28571968, -
1.78e-29FFCP PHASE2:Hg19::chr2:234862417..234862434,+#_1b95cd093abad85ff1daec551ffc50b7p6@TRPM8
1.78e-29FFCP PHASE2:Hg19::chr14:60958049..60958051,-#_1b95cd093abad85ff1daec551ffc50b7p@chr14:60958049..60958051, -
1.78e-29FFCP PHASE2:Hg19::chr11:86502231..86502240,-#_1b95cd093abad85ff1daec551ffc50b7p@chr11:86502231..86502240, -
1.78e-29FFCP PHASE1:Hg19::chr2:192805239..192805246,+#_1b95cd093abad85ff1daec551ffc50b7p@chr2:192805239..192805246, +
1.78e-29FFCP PHASE1:Hg19::chr8:39970826..39970832,+#_1b95cd093abad85ff1daec551ffc50b7p@chr8:39970826..39970832, +
1.78e-29FFCP PHASE2:Hg19::chr8:98103977..98103981,-#_1b95cd093abad85ff1daec551ffc50b7p@chr8:98103977..98103981, -
1.78e-29FFCP PHASE1:Hg19::chr12:84664596..84664600,+#_1b95cd093abad85ff1daec551ffc50b7p@chr12:84664596..84664600, +
1.78e-29FFCP PHASE2:Hg19::chr5:33619040..33619056,-#_1b95cd093abad85ff1daec551ffc50b7p@chr5:33619040..33619056, -
1.78e-29FFCP PHASE2:Hg19::chr2:241625621..241625629,+#_1b95cd093abad85ff1daec551ffc50b7p2@ENST00000407635
1.78e-29FFCP PHASE1:Hg19::chr8:57525935..57525942,+#_1b95cd093abad85ff1daec551ffc50b7p@chr8:57525935..57525942, +
1.78e-29FFCP PHASE1:Hg19::chr7:26590563..26590574,-#_1b95cd093abad85ff1daec551ffc50b7p@chr7:26590563..26590574, -
1.78e-29FFCP PHASE1:Hg19::chr2:135119636..135119642,+#_1b95cd093abad85ff1daec551ffc50b7p@chr2:135119636..135119642, +

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