Personal tools

DOID:1907: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
Line 13: Line 13:
|located_in=
|located_in=
|name=malignant fibroxanthoma
|name=malignant fibroxanthoma
|namespace=disease_ontology
|namespace=FANTOM
|obo_creation_date=
|obo_creation_date=
|part_of=
|part_of=

Latest revision as of 16:49, 12 September 2014

Name:malignant fibroxanthoma
Namespace:FANTOM
Xrefs:
links:

MSH:D051677
NCI:C4247
SNOMEDCT_2010_1_31:189772005
SNOMEDCT_2010_1_31:253040001
SNOMEDCT_2010_1_31:34360000
SNOMEDCT_2010_1_31:443439001

UMLS_CUI:C0334463
Synonyms: "fibrous histiocytoma, malignant (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:34360000]
"Fibroxanthosarcoma" EXACT [SNOMEDCT_2005_07_31:189772005]
"Fibroxanthosarcoma (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:253040001]
"MFH" EXACT [NCI2004_11_17:C4247]

Ontology association<br>Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:DOID:4231(histiocytoma)



Children


is a:FF:10600-108E6 (myxofibrosarcoma cell line:MFH-ino),FF:10684-109E9 (myxofibrosarcoma cell line:NMFH-1)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples

Human (Homo sapiens)

Mouse (Mus musculus)

Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:1907 (malignant fibroxanthoma), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.55e-98FFCP PHASE1:Hg19::chr15:33381289..33381339,-#_c547c76018d6f6605968402a50f46af8p@chr15:33381289..33381339, -
1.55e-98FFCP PHASE2:Hg19::chr15:33381289..33381339,-#_c547c76018d6f6605968402a50f46af8p@chr15:33381289..33381339, -
1.55e-98FFCP PHASE1:Hg19::chr15:33381479..33381503,-#_c547c76018d6f6605968402a50f46af8p@chr15:33381479..33381503, -
1.55e-98FFCP PHASE2:Hg19::chr15:33381479..33381503,-#_c547c76018d6f6605968402a50f46af8p@chr15:33381479..33381503, -
1.55e-98FFCP PHASE1:Hg19::chr13:109644091..109644095,+#_c547c76018d6f6605968402a50f46af8p@chr13:109644091..109644095, +
1.55e-98FFCP PHASE2:Hg19::chr13:109644091..109644095,+#_c547c76018d6f6605968402a50f46af8p@chr13:109644091..109644095, +
2.0e-56FFCP PHASE1:Hg19::chr4:117248477..117248490,-#_b7894504dbe6de1924bdf29ae71cf323p@chr4:117248477..117248490, -
2.0e-56FFCP PHASE2:Hg19::chr4:117248477..117248490,-#_b7894504dbe6de1924bdf29ae71cf323p@chr4:117248477..117248490, -
4.52e-50FFCP PHASE1:Hg19::chr8:69961573..69961578,+#_13c727c1b75e916ca49858a0b2fdd205p@chr8:69961573..69961578, +
4.52e-50FFCP PHASE2:Hg19::chr18:71423741..71423743,+#_13c727c1b75e916ca49858a0b2fdd205p@chr18:71423741..71423743, +
4.52e-50FFCP PHASE2:Hg19::chr8:69961573..69961578,+#_13c727c1b75e916ca49858a0b2fdd205p@chr8:69961573..69961578, +
4.52e-50FFCP PHASE1:Hg19::chr17:80355095..80355101,+#_13c727c1b75e916ca49858a0b2fdd205p@chr17:80355095..80355101, +
4.52e-50FFCP PHASE1:Hg19::chr12:7527226..7527237,-#_13c727c1b75e916ca49858a0b2fdd205p@chr12:7527226..7527237, -
4.52e-50FFCP PHASE2:Hg19::chr17:80355095..80355101,+#_13c727c1b75e916ca49858a0b2fdd205p@chr17:80355095..80355101, +
4.52e-50FFCP PHASE1:Hg19::chr2:76601764..76601766,-#_13c727c1b75e916ca49858a0b2fdd205p@chr2:76601764..76601766, -
4.52e-50FFCP PHASE1:Hg19::chr7:157406696..157406703,-#_13c727c1b75e916ca49858a0b2fdd205p@chr7:157406696..157406703, -
4.52e-50FFCP PHASE2:Hg19::chr12:7527226..7527237,-#_13c727c1b75e916ca49858a0b2fdd205p@chr12:7527226..7527237, -
4.52e-50FFCP PHASE1:Hg19::chr11:36376725..36376731,+#_13c727c1b75e916ca49858a0b2fdd205p@chr11:36376725..36376731, +
4.52e-50FFCP PHASE2:Hg19::chr2:76601764..76601766,-#_13c727c1b75e916ca49858a0b2fdd205p@chr2:76601764..76601766, -
4.52e-50FFCP PHASE2:Hg19::chr7:157406696..157406703,-#_13c727c1b75e916ca49858a0b2fdd205p@chr7:157406696..157406703, -
4.52e-50FFCP PHASE2:Hg19::chr11:36376725..36376731,+#_13c727c1b75e916ca49858a0b2fdd205p@chr11:36376725..36376731, +
4.52e-50FFCP PHASE1:Hg19::chr18:71423741..71423743,+#_13c727c1b75e916ca49858a0b2fdd205p@chr18:71423741..71423743, +
3.61e-34FFCP PHASE1:Hg19::chr1:194317048..194317050,+#_5fbccbaebe74457577067f4689b4fb40p@chr1:194317048..194317050, +
3.61e-34FFCP PHASE2:Hg19::chr1:194317048..194317050,+#_5fbccbaebe74457577067f4689b4fb40p@chr1:194317048..194317050, +
5.04e-34FFCP PHASE2:Hg19::chr3:156437182..156437193,+#_9bcd06714a6de4f421c612d0f6f4c610p@chr3:156437182..156437193, +
5.04e-34FFCP PHASE1:Hg19::chr3:156437182..156437193,+#_9bcd06714a6de4f421c612d0f6f4c610p@chr3:156437182..156437193, +
7.05e-34FFCP PHASE1:Hg19::chr12:68696657..68696661,-#_56069b85bf3accca366b341f7de746bbp4@MDM1
7.05e-34FFCP PHASE2:Hg19::chr12:68696657..68696661,-#_56069b85bf3accca366b341f7de746bbp4@MDM1
7.05e-34FFCP PHASE1:Hg19::chr5:103559757..103559775,+#_56069b85bf3accca366b341f7de746bbp@chr5:103559757..103559775, +
7.05e-34FFCP PHASE2:Hg19::chr5:103559757..103559775,+#_56069b85bf3accca366b341f7de746bbp@chr5:103559757..103559775, +
1.93e-33FFCP PHASE2:Hg19::chr17:72955416..72955420,-#_8d78e517f0ea76e67ff14b1493ce7d5bp@chr17:72955416..72955420, -
1.93e-33FFCP PHASE1:Hg19::chr17:72955416..72955420,-#_8d78e517f0ea76e67ff14b1493ce7d5bp@chr17:72955416..72955420, -
3.46e-31FFCP PHASE1:Hg19::chr12:122380361..122380372,+#_b54af8e683e0e1f7da3638c83791f9fdp@chr12:122380361..122380372, +
3.46e-31FFCP PHASE2:Hg19::chr12:122380361..122380372,+#_b54af8e683e0e1f7da3638c83791f9fdp@chr12:122380361..122380372, +
1.07e-28FFCP PHASE1:Hg19::chr4:167119468..167119481,+#_48d807a3831d35dc4afbf812c9e9fe62p@chr4:167119468..167119481, +
1.07e-28FFCP PHASE2:Hg19::chr4:167119468..167119481,+#_48d807a3831d35dc4afbf812c9e9fe62p@chr4:167119468..167119481, +
5.56e-26FFCP PHASE2:Hg19::chr2:205099700..205099708,-#_9601812ae28cde806f62c023f0b6f60cp2@ENST00000419860
5.56e-26FFCP PHASE1:Hg19::chr2:205099700..205099708,-#_9601812ae28cde806f62c023f0b6f60cp2@ENST00000419860
9.18e-26FFCP PHASE2:Hg19::chr3:83227676..83227682,-#_2d38be3235dc8d2341a50d3f996983acp@chr3:83227676..83227682, -
9.18e-26FFCP PHASE1:Hg19::chr6:139904316..139904323,+#_2d38be3235dc8d2341a50d3f996983acp@chr6:139904316..139904323, +
9.18e-26FFCP PHASE2:Hg19::chr6:73008787..73008824,+#_2d38be3235dc8d2341a50d3f996983acp@chr6:73008787..73008824, +
9.18e-26FFCP PHASE2:Hg19::chr6:139904316..139904323,+#_2d38be3235dc8d2341a50d3f996983acp@chr6:139904316..139904323, +
9.18e-26FFCP PHASE1:Hg19::chr12:96236394..96236404,-#_2d38be3235dc8d2341a50d3f996983acp@chr12:96236394..96236404, -
9.18e-26FFCP PHASE1:Hg19::chr19:49105940..49105943,-#_2d38be3235dc8d2341a50d3f996983acp@chr19:49105940..49105943, -
9.18e-26FFCP PHASE2:Hg19::chr12:96236394..96236404,-#_2d38be3235dc8d2341a50d3f996983acp@chr12:96236394..96236404, -
9.18e-26FFCP PHASE2:Hg19::chr19:49105940..49105943,-#_2d38be3235dc8d2341a50d3f996983acp@chr19:49105940..49105943, -
9.18e-26FFCP PHASE1:Hg19::chr3:83227676..83227682,-#_2d38be3235dc8d2341a50d3f996983acp@chr3:83227676..83227682, -
9.18e-26FFCP PHASE1:Hg19::chr6:73008787..73008824,+#_2d38be3235dc8d2341a50d3f996983acp@chr6:73008787..73008824, +
1.42e-23FFCP PHASE1:Hg19::chr21:19858196..19858204,-#_7a2dc561e09c47e43b1aaf3a4c745f6ep2@TMPRSS15
1.42e-23FFCP PHASE2:Hg19::chr21:19858196..19858204,-#_7a2dc561e09c47e43b1aaf3a4c745f6ep2@TMPRSS15
3.81e-21FFCP PHASE1:Hg19::chr10:108096792..108096803,-#_b51fea70378192e6119cc74ef561e9cbp@chr10:108096792..108096803, -
3.81e-21FFCP PHASE1:Hg19::chr18:61586483..61586487,+#_b51fea70378192e6119cc74ef561e9cbp@chr18:61586483..61586487, +
3.81e-21FFCP PHASE2:Hg19::chr10:108096792..108096803,-#_b51fea70378192e6119cc74ef561e9cbp@chr10:108096792..108096803, -
3.81e-21FFCP PHASE2:Hg19::chr18:61586483..61586487,+#_b51fea70378192e6119cc74ef561e9cbp@chr18:61586483..61586487, +
3.81e-21FFCP PHASE1:Hg19::chr16:30908194..30908197,-#_b51fea70378192e6119cc74ef561e9cbp@chr16:30908194..30908197, -
3.81e-21FFCP PHASE2:Hg19::chr16:30908194..30908197,-#_b51fea70378192e6119cc74ef561e9cbp@chr16:30908194..30908197, -
4.25e-21FFCP PHASE1:Hg19::chrX:92951202..92951214,+#_603f4b7e0b9320f1b7cefc75946fa78dp@chrX:92951202..92951214, +
4.25e-21FFCP PHASE2:Hg19::chrX:92951202..92951214,+#_603f4b7e0b9320f1b7cefc75946fa78dp@chrX:92951202..92951214, +
5.7e-21FFCP PHASE1:Hg19::chr7:116482046..116482049,+#_9b5202a24af3635357a8fe76e76e8832p@chr7:116482046..116482049, +
5.7e-21FFCP PHASE2:Hg19::chr7:116482046..116482049,+#_9b5202a24af3635357a8fe76e76e8832p@chr7:116482046..116482049, +
6.96e-21FFCP PHASE2:Hg19::chr11:131766993..131767004,-#_3588d58f628e8c4202b8525314bd14e5p2@ENST00000419440
6.96e-21FFCP PHASE1:Hg19::chrX:15755702..15755707,+#_3588d58f628e8c4202b8525314bd14e5p@chrX:15755702..15755707, +
6.96e-21FFCP PHASE2:Hg19::chrX:15755702..15755707,+#_3588d58f628e8c4202b8525314bd14e5p@chrX:15755702..15755707, +
6.96e-21FFCP PHASE1:Hg19::chr17:79499907..79499910,-#_3588d58f628e8c4202b8525314bd14e5p@chr17:79499907..79499910, -
6.96e-21FFCP PHASE2:Hg19::chr17:79499907..79499910,-#_3588d58f628e8c4202b8525314bd14e5p@chr17:79499907..79499910, -
6.96e-21FFCP PHASE1:Hg19::chr11:131766993..131767004,-#_3588d58f628e8c4202b8525314bd14e5p2@ENST00000419440
1.17e-20FFCP PHASE1:Hg19::chr7:42007248..42007253,+#_334c42e17ae74c62ad88e09fddc4918ap@chr7:42007248..42007253, +
1.17e-20FFCP PHASE2:Hg19::chr7:42007248..42007253,+#_334c42e17ae74c62ad88e09fddc4918ap@chr7:42007248..42007253, +
4.96e-19FFCP PHASE1:Hg19::chr8:18942514..18942527,-#_178528d0b85089e967aefae0df4cd6fdp24@PSD3
4.96e-19FFCP PHASE2:Hg19::chr8:18942514..18942527,-#_178528d0b85089e967aefae0df4cd6fdp24@PSD3
1.77e-18FFCP PHASE2:Hg19::chrX:141293028..141293039,-#_ee519f406875c5534c18aba692f66704p2@MAGEC2
1.77e-18FFCP PHASE1:Hg19::chrX:141293028..141293039,-#_ee519f406875c5534c18aba692f66704p2@MAGEC2
5.48e-18FFCP PHASE1:Hg19::chr3:42515138..42515150,-#_e7f53b0fd7dcc9c1592242666c221b21p@chr3:42515138..42515150, -
5.48e-18FFCP PHASE2:Hg19::chr3:42515138..42515150,-#_e7f53b0fd7dcc9c1592242666c221b21p@chr3:42515138..42515150, -
6.48e-18FFCP PHASE1:Hg19::chr6:97169224..97169250,-#_67709152e8e0dff93792695127eebebfp@chr6:97169224..97169250, -
6.48e-18FFCP PHASE1:Hg19::chr10:108096806..108096825,-#_67709152e8e0dff93792695127eebebfp@chr10:108096806..108096825, -
6.48e-18FFCP PHASE1:Hg19::chr18:14970228..14970238,-#_67709152e8e0dff93792695127eebebfp@chr18:14970228..14970238, -
6.48e-18FFCP PHASE2:Hg19::chr6:97169224..97169250,-#_67709152e8e0dff93792695127eebebfp@chr6:97169224..97169250, -
6.48e-18FFCP PHASE1:Hg19::chr2:241309941..241309945,+#_67709152e8e0dff93792695127eebebfp@chr2:241309941..241309945, +
6.48e-18FFCP PHASE2:Hg19::chr18:14970228..14970238,-#_67709152e8e0dff93792695127eebebfp@chr18:14970228..14970238, -
6.48e-18FFCP PHASE2:Hg19::chr10:108096806..108096825,-#_67709152e8e0dff93792695127eebebfp@chr10:108096806..108096825, -
6.48e-18FFCP PHASE2:Hg19::chr2:241309941..241309945,+#_67709152e8e0dff93792695127eebebfp@chr2:241309941..241309945, +
7.67e-18FFCP PHASE1:Hg19::chr18:53735637..53735649,-#_5bb97bcdd5443241bd034e71b5edb280p@chr18:53735637..53735649, -
7.67e-18FFCP PHASE2:Hg19::chr18:53735637..53735649,-#_5bb97bcdd5443241bd034e71b5edb280p@chr18:53735637..53735649, -
7.67e-18FFCP PHASE1:Hg19::chr5:30104096..30104103,-#_5bb97bcdd5443241bd034e71b5edb280p@chr5:30104096..30104103, -
7.67e-18FFCP PHASE2:Hg19::chr5:30104096..30104103,-#_5bb97bcdd5443241bd034e71b5edb280p@chr5:30104096..30104103, -
9.07e-18FFCP PHASE2:Hg19::chr2:177503895..177503906,+#_7d875ea2167449c0c6c2495e244998e1p@chr2:177503895..177503906, +
9.07e-18FFCP PHASE1:Hg19::chr5:148443005..148443015,+#_7d875ea2167449c0c6c2495e244998e1p1@ENST00000509139
9.07e-18FFCP PHASE2:Hg19::chr5:148443005..148443015,+#_7d875ea2167449c0c6c2495e244998e1p1@ENST00000509139
9.07e-18FFCP PHASE1:Hg19::chr7:127282115..127282120,+#_7d875ea2167449c0c6c2495e244998e1p@chr7:127282115..127282120, +
9.07e-18FFCP PHASE1:Hg19::chr8:88823985..88824001,-#_7d875ea2167449c0c6c2495e244998e1p@chr8:88823985..88824001, -
9.07e-18FFCP PHASE2:Hg19::chr7:127282115..127282120,+#_7d875ea2167449c0c6c2495e244998e1p@chr7:127282115..127282120, +
9.07e-18FFCP PHASE1:Hg19::chr2:177503895..177503906,+#_7d875ea2167449c0c6c2495e244998e1p@chr2:177503895..177503906, +
9.07e-18FFCP PHASE2:Hg19::chr8:88823985..88824001,-#_7d875ea2167449c0c6c2495e244998e1p@chr8:88823985..88824001, -
1.07e-17FFCP PHASE2:Hg19::chr15:80603266..80603271,-#_054e2afea41917cb246161536052e9d4p@chr15:80603266..80603271, -
1.07e-17FFCP PHASE1:Hg19::chr8:19171438..19171449,+#_054e2afea41917cb246161536052e9d4p12@SH2D4A
1.07e-17FFCP PHASE1:Hg19::chr15:80603266..80603271,-#_054e2afea41917cb246161536052e9d4p@chr15:80603266..80603271, -
1.07e-17FFCP PHASE2:Hg19::chr8:19171438..19171449,+#_054e2afea41917cb246161536052e9d4p12@SH2D4A
1.26e-17FFCP PHASE1:Hg19::chr10:33625154..33625165,-#_41d5afd47dce4076b9193926305969dcp20@NRP1
1.26e-17FFCP PHASE2:Hg19::chr10:33625154..33625165,-#_41d5afd47dce4076b9193926305969dcp20@NRP1

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=DOID:1907&oldid=3275645"