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(Created page with "{{UBERON |id=UBERON:0000993 |name=oviduct |namespace= |def="passage from the ovaries to the outside of the body[Wikipedia:Oviduct]." [Wikipedia:Oviduct] |xref=AAO:0010533...")
 
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{{UBERON
{{UBERON
|id=UBERON:0000993
|alt_id=UBERON:FBbt_00004911-FMA_18245-MA_0000385-MIAA_0000126-XAO_0003052-ZFA_0000560
|name=oviduct
|namespace=
|def="passage from the ovaries to the outside of the body[Wikipedia:Oviduct]." [Wikipedia:Oviduct]
|xref=AAO:0010533;;BTO:0000980;;EFO:0000974;;EMAPA:18984;;GAID:366;;MAT:0000126;;MESH:A.13.706;;MIAA:0000126;;ncithesaurus:Oviduct;;TAO:0000560;;VHOG:0001136;;XAO:0003052;;ZFA:0000560
|is_a=UBERON:0000025;;UBERON:0005156
|synonym="salpinx" RELATED [BTO:0000980];;"tuba uterina" RELATED [BTO:0000980];;"tuba uterinae" RELATED [BTO:0000980];;"uterine tube" RELATED []
|comment=note that the more specific class fallopian tube is included, which has mammal-specific relationships
|comment=note that the more specific class fallopian tube is included, which has mammal-specific relationships
|alt_id=UBERON:FBbt_00004911-FMA_18245-MA_0000385-MIAA_0000126-XAO_0003052-ZFA_0000560
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="passage from the ovaries to the outside of the body[Wikipedia:Oviduct]." [Wikipedia:Oviduct]
|subset=uberon_slim;;vertebrate_core
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0000993
|is_a=UBERON:0000025 ;;UBERON:0005156 ;;UBERON:0014404
|is_obsolete=
|located_in=
|located_in=
|name=oviduct
|namespace=FANTOM
|obo_creation_date=
|part_of=UBERON:0000474
|part_of=UBERON:0000474
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|subset=uberon_slim;;vertebrate_core
|synonym="salpinx" RELATED [BTO:0000980];;"tuba uterina" RELATED [BTO:0000980];;"tuba uterinae" RELATED [BTO:0000980];;"uterine tube" RELATED []
|union_of=
|xref=AAO:0010533;;BTO:0000980;;EFO:0000974;;EMAPA:18984;;GAID:366;;MAT:0000126;;MESH:A.13.706;;MIAA:0000126;;ncithesaurus:Oviduct;;TAO:0000560;;VHOG:0001136;;XAO:0003052;;ZFA:0000560
}}
}}

Latest revision as of 17:13, 12 September 2014

Name:oviduct
Namespace:FANTOM
Definition:"passage from the ovaries to the outside of the body[Wikipedia:Oviduct]." [Wikipedia:Oviduct]
Xrefs:
links:

AAO:0010533
BTO:0000980
EFO:0000974
EMAPA:18984
GAID:366
MAT:0000126
MESH:A.13.706
MIAA:0000126
ncithesaurus:Oviduct
TAO:0000560
VHOG:0001136
XAO:0003052

ZFA:0000560
Synonyms: "salpinx" RELATED [BTO:0000980]
"tuba uterina" RELATED [BTO:0000980]
"tuba uterinae" RELATED [BTO:0000980]
"uterine tube" RELATED []
Comments:note that the more specific class fallopian tube is included, which has mammal-specific relationships
Alt_id: UBERON:FBbt_00004911-FMA_18245-MA_0000385-MIAA_0000126-XAO_0003052-ZFA_0000560
Subset: uberon_slim
vertebrate_core

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0000025(tube),UBERON:0005156(reproductive structure),UBERON:0014404(female anatomical structure)
part_of:UBERON:0000474(female reproductive system)



Children

derives from:FF:0011442 (mouse oviduct- adult pregnant day01 sample)
part of:UBERON:0003889 (fallopian tube),UBERON:0004804 (oviduct epithelium),UBERON:0013515 (subdivision of uterine tube)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Mouse (Mus musculus)

  • 988-6G6 (oviduct, adult pregnant day01)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0000993 (oviduct), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
3.07e-86FFCP PHASE1:Mm9::chr9:21163868..21163870,-#_d938767eb1504e613edcb8dc5bf6482ep@chr9:21163868..21163870, -
3.07e-86FFCP PHASE1:Mm9::chr3:105777892..105777895,+#_d938767eb1504e613edcb8dc5bf6482ep@chr3:105777892..105777895, +
3.07e-86FFCP PHASE2:Mm9::chr3:105777892..105777895,+#_d938767eb1504e613edcb8dc5bf6482ep@chr3:105777892..105777895, +
3.07e-86FFCP PHASE1:Mm9::chr7:125792661..125792708,+#_d938767eb1504e613edcb8dc5bf6482ep@chr7:125792661..125792708, +
3.07e-86FFCP PHASE1:Mm9::chr6:29210843..29210862,-#_d938767eb1504e613edcb8dc5bf6482ep@chr6:29210843..29210862, -
3.07e-86FFCP PHASE2:Mm9::chr6:29210843..29210862,-#_d938767eb1504e613edcb8dc5bf6482ep@chr6:29210843..29210862, -
3.07e-86FFCP PHASE1:Mm9::chr4:120766607..120766613,+#_d938767eb1504e613edcb8dc5bf6482ep@chr4:120766607..120766613, +
3.07e-86FFCP PHASE2:Mm9::chr3:141771414..141771429,-#_d938767eb1504e613edcb8dc5bf6482ep@chr3:141771414..141771429, -
3.07e-86FFCP PHASE2:Mm9::chr9:21163868..21163870,-#_d938767eb1504e613edcb8dc5bf6482ep@chr9:21163868..21163870, -
3.07e-86FFCP PHASE1:Mm9::chr18:39029234..39029244,+#_d938767eb1504e613edcb8dc5bf6482ep@chr18:39029234..39029244, +
3.07e-86FFCP PHASE2:Mm9::chr19:38299195..38299209,-#_d938767eb1504e613edcb8dc5bf6482ep@chr19:38299195..38299209, -
3.07e-86FFCP PHASE2:Mm9::chr7:125792661..125792708,+#_d938767eb1504e613edcb8dc5bf6482ep@chr7:125792661..125792708, +
3.07e-86FFCP PHASE1:Mm9::chr19:38299195..38299209,-#_d938767eb1504e613edcb8dc5bf6482ep@chr19:38299195..38299209, -
3.07e-86FFCP PHASE1:Mm9::chr3:141771414..141771429,-#_d938767eb1504e613edcb8dc5bf6482ep@chr3:141771414..141771429, -
3.07e-86FFCP PHASE2:Mm9::chr18:39029234..39029244,+#_d938767eb1504e613edcb8dc5bf6482ep@chr18:39029234..39029244, +
3.07e-86FFCP PHASE2:Mm9::chr4:120766607..120766613,+#_d938767eb1504e613edcb8dc5bf6482ep@chr4:120766607..120766613, +
2.74e-44FFCP PHASE1:Mm9::chr3:105790295..105790298,+#_2839de485ed04f174a1946b11a8a16dep@chr3:105790295..105790298, +
2.74e-44FFCP PHASE1:Mm9::chr6:54287230..54287236,-#_2839de485ed04f174a1946b11a8a16dep@chr6:54287230..54287236, -
2.74e-44FFCP PHASE2:Mm9::chr3:105790295..105790298,+#_2839de485ed04f174a1946b11a8a16dep@chr3:105790295..105790298, +
2.74e-44FFCP PHASE1:Mm9::chr7:130372393..130372399,+#_2839de485ed04f174a1946b11a8a16dep5@Slc5a11
2.74e-44FFCP PHASE1:Mm9::chr2:120276468..120276479,+#_2839de485ed04f174a1946b11a8a16dep13@Ganc
2.74e-44FFCP PHASE2:Mm9::chr6:54287230..54287236,-#_2839de485ed04f174a1946b11a8a16dep@chr6:54287230..54287236, -
2.74e-44FFCP PHASE1:Mm9::chr19:17444552..17444593,+#_2839de485ed04f174a1946b11a8a16dep@chr19:17444552..17444593, +
2.74e-44FFCP PHASE1:Mm9::chr4:19779277..19779280,+#_2839de485ed04f174a1946b11a8a16dep@chr4:19779277..19779280, +
2.74e-44FFCP PHASE1:Mm9::chr15:98002475..98002482,+#_2839de485ed04f174a1946b11a8a16dep@chr15:98002475..98002482, +
2.74e-44FFCP PHASE2:Mm9::chr7:130372393..130372399,+#_2839de485ed04f174a1946b11a8a16dep5@Slc5a11
2.74e-44FFCP PHASE1:Mm9::chr3:105780704..105780709,+#_2839de485ed04f174a1946b11a8a16dep4@Ovgp1
2.74e-44FFCP PHASE2:Mm9::chr3:105780704..105780709,+#_2839de485ed04f174a1946b11a8a16dep4@Ovgp1
2.74e-44FFCP PHASE2:Mm9::chr19:17444552..17444593,+#_2839de485ed04f174a1946b11a8a16dep@chr19:17444552..17444593, +
2.74e-44FFCP PHASE1:Mm9::chr2:103123759..103123777,-#_2839de485ed04f174a1946b11a8a16dep5@Ehf
2.74e-44FFCP PHASE2:Mm9::chr2:120276468..120276479,+#_2839de485ed04f174a1946b11a8a16dep13@Ganc
2.74e-44FFCP PHASE2:Mm9::chr2:103123759..103123777,-#_2839de485ed04f174a1946b11a8a16dep5@Ehf
2.74e-44FFCP PHASE1:Mm9::chr3:105788001..105788016,+#_2839de485ed04f174a1946b11a8a16dep@chr3:105788001..105788016, +
2.74e-44FFCP PHASE2:Mm9::chr3:105788001..105788016,+#_2839de485ed04f174a1946b11a8a16dep@chr3:105788001..105788016, +
2.74e-44FFCP PHASE1:Mm9::chr3:105789073..105789080,+#_2839de485ed04f174a1946b11a8a16dep@chr3:105789073..105789080, +
2.74e-44FFCP PHASE2:Mm9::chr15:98002475..98002482,+#_2839de485ed04f174a1946b11a8a16dep@chr15:98002475..98002482, +
2.74e-44FFCP PHASE2:Mm9::chr3:105789073..105789080,+#_2839de485ed04f174a1946b11a8a16dep@chr3:105789073..105789080, +
2.74e-44FFCP PHASE2:Mm9::chr4:19779277..19779280,+#_2839de485ed04f174a1946b11a8a16dep@chr4:19779277..19779280, +
2.74e-44FFCP PHASE1:Mm9::chr3:108692908..108692949,-#_2839de485ed04f174a1946b11a8a16dep4@Fndc7
2.74e-44FFCP PHASE2:Mm9::chr3:108692908..108692949,-#_2839de485ed04f174a1946b11a8a16dep4@Fndc7
7.47e-44FFCP PHASE1:Mm9::chr5:136455974..136455978,+#_562aaba022e4eb00552aa2569b19e33ep1@Zp3
7.47e-44FFCP PHASE2:Mm9::chr1:194971478..194971490,+#_562aaba022e4eb00552aa2569b19e33ep@chr1:194971478..194971490, +
7.47e-44FFCP PHASE2:Mm9::chr2:36093028..36093030,+#_562aaba022e4eb00552aa2569b19e33ep@chr2:36093028..36093030, +
7.47e-44FFCP PHASE1:Mm9::chr2:36093028..36093030,+#_562aaba022e4eb00552aa2569b19e33ep@chr2:36093028..36093030, +
7.47e-44FFCP PHASE2:Mm9::chr5:136455974..136455978,+#_562aaba022e4eb00552aa2569b19e33ep1@Zp3
7.47e-44FFCP PHASE1:Mm9::chr1:194971478..194971490,+#_562aaba022e4eb00552aa2569b19e33ep@chr1:194971478..194971490, +
2.87e-30FFCP PHASE2:Mm9::chr1:38378826..38378842,-#_d3bff877d5074b9fcdd310111a1965e1p@chr1:38378826..38378842, -
2.87e-30FFCP PHASE1:Mm9::chr1:71943019..71943026,-#_d3bff877d5074b9fcdd310111a1965e1p@chr1:71943019..71943026, -
2.87e-30FFCP PHASE1:Mm9::chr9:50283814..50283832,-#_d3bff877d5074b9fcdd310111a1965e1p@chr9:50283814..50283832, -
2.87e-30FFCP PHASE1:Mm9::chr16:89701685..89701690,-#_d3bff877d5074b9fcdd310111a1965e1p@chr16:89701685..89701690, -
2.87e-30FFCP PHASE1:Mm9::chr1:38378826..38378842,-#_d3bff877d5074b9fcdd310111a1965e1p@chr1:38378826..38378842, -
2.87e-30FFCP PHASE2:Mm9::chr9:122648396..122648402,+#_d3bff877d5074b9fcdd310111a1965e1p@chr9:122648396..122648402, +
2.87e-30FFCP PHASE2:Mm9::chr1:185455318..185455329,+#_d3bff877d5074b9fcdd310111a1965e1p@chr1:185455318..185455329, +
2.87e-30FFCP PHASE1:Mm9::chr3:29913309..29913312,-#_d3bff877d5074b9fcdd310111a1965e1p@chr3:29913309..29913312, -
2.87e-30FFCP PHASE2:Mm9::chr3:29913309..29913312,-#_d3bff877d5074b9fcdd310111a1965e1p@chr3:29913309..29913312, -
2.87e-30FFCP PHASE2:Mm9::chr10:75405765..75405773,+#_d3bff877d5074b9fcdd310111a1965e1p4@Vpreb3
2.87e-30FFCP PHASE2:Mm9::chr1:71943019..71943026,-#_d3bff877d5074b9fcdd310111a1965e1p@chr1:71943019..71943026, -
2.87e-30FFCP PHASE1:Mm9::chr1:79668659..79668663,-#_d3bff877d5074b9fcdd310111a1965e1p3@Ap1s3
2.87e-30FFCP PHASE1:Mm9::chr10:75405765..75405773,+#_d3bff877d5074b9fcdd310111a1965e1p4@Vpreb3
2.87e-30FFCP PHASE1:Mm9::chr1:185455318..185455329,+#_d3bff877d5074b9fcdd310111a1965e1p@chr1:185455318..185455329, +
2.87e-30FFCP PHASE2:Mm9::chr17:46233607..46233616,-#_d3bff877d5074b9fcdd310111a1965e1p@chr17:46233607..46233616, -
2.87e-30FFCP PHASE1:Mm9::chr3:108692830..108692835,-#_d3bff877d5074b9fcdd310111a1965e1p3@Fndc7
2.87e-30FFCP PHASE2:Mm9::chr9:50283814..50283832,-#_d3bff877d5074b9fcdd310111a1965e1p@chr9:50283814..50283832, -
2.87e-30FFCP PHASE2:Mm9::chr3:108692830..108692835,-#_d3bff877d5074b9fcdd310111a1965e1p3@Fndc7
2.87e-30FFCP PHASE2:Mm9::chr1:79668659..79668663,-#_d3bff877d5074b9fcdd310111a1965e1p3@Ap1s3
2.87e-30FFCP PHASE1:Mm9::chr9:122648396..122648402,+#_d3bff877d5074b9fcdd310111a1965e1p@chr9:122648396..122648402, +
2.87e-30FFCP PHASE1:Mm9::chr17:46233607..46233616,-#_d3bff877d5074b9fcdd310111a1965e1p@chr17:46233607..46233616, -
2.87e-30FFCP PHASE2:Mm9::chr16:89701685..89701690,-#_d3bff877d5074b9fcdd310111a1965e1p@chr16:89701685..89701690, -
5.62e-30FFCP PHASE1:Mm9::chr13:53734594..53734605,-#_215a6d92c91169bdad9320d3f333fc80p2@uc007qnx.1
5.62e-30FFCP PHASE2:Mm9::chr13:53734594..53734605,-#_215a6d92c91169bdad9320d3f333fc80p2@uc007qnx.1
5.62e-30FFCP PHASE1:Mm9::chr12:80428226..80428237,+#_215a6d92c91169bdad9320d3f333fc80p@chr12:80428226..80428237, +
5.62e-30FFCP PHASE1:Mm9::chr14:70215815..70215841,-#_215a6d92c91169bdad9320d3f333fc80p@chr14:70215815..70215841, -
5.62e-30FFCP PHASE2:Mm9::chr9:50256004..50256026,-#_215a6d92c91169bdad9320d3f333fc80p@chr9:50256004..50256026, -
5.62e-30FFCP PHASE2:Mm9::chr14:70215815..70215841,-#_215a6d92c91169bdad9320d3f333fc80p@chr14:70215815..70215841, -
5.62e-30FFCP PHASE2:Mm9::chr1:4486594..4486612,-#_215a6d92c91169bdad9320d3f333fc80p6@Sox17
5.62e-30FFCP PHASE2:Mm9::chr12:80428226..80428237,+#_215a6d92c91169bdad9320d3f333fc80p@chr12:80428226..80428237, +
5.62e-30FFCP PHASE1:Mm9::chr13:53734576..53734581,-#_215a6d92c91169bdad9320d3f333fc80p4@uc007qnx.1
5.62e-30FFCP PHASE1:Mm9::chr9:50256004..50256026,-#_215a6d92c91169bdad9320d3f333fc80p@chr9:50256004..50256026, -
5.62e-30FFCP PHASE2:Mm9::chr13:53734576..53734581,-#_215a6d92c91169bdad9320d3f333fc80p4@uc007qnx.1
5.62e-30FFCP PHASE1:Mm9::chr1:4486594..4486612,-#_215a6d92c91169bdad9320d3f333fc80p6@Sox17
1.1e-29FFCP PHASE2:Mm9::chr10:39254566..39254581,-#_99293f6d197386bfa800bd4695878e86p@chr10:39254566..39254581, -
1.1e-29FFCP PHASE2:Mm9::chr6:82855186..82855200,-#_99293f6d197386bfa800bd4695878e86p@chr6:82855186..82855200, -
1.1e-29FFCP PHASE2:Mm9::chr2:3283846..3283859,-#_99293f6d197386bfa800bd4695878e86p1@Olah
1.1e-29FFCP PHASE1:Mm9::chr6:113860537..113860546,-#_99293f6d197386bfa800bd4695878e86p13@Atp2b2
1.1e-29FFCP PHASE1:Mm9::chr6:82855186..82855200,-#_99293f6d197386bfa800bd4695878e86p@chr6:82855186..82855200, -
1.1e-29FFCP PHASE2:Mm9::chr17:12881635..12881640,-#_99293f6d197386bfa800bd4695878e86p@chr17:12881635..12881640, -
1.1e-29FFCP PHASE1:Mm9::chr2:3283846..3283859,-#_99293f6d197386bfa800bd4695878e86p1@Olah
1.1e-29FFCP PHASE2:Mm9::chr10:75403311..75403323,-#_99293f6d197386bfa800bd4695878e86p3@ENSMUST00000059658, p3@uc007fts.1
1.1e-29FFCP PHASE2:Mm9::chr6:113860537..113860546,-#_99293f6d197386bfa800bd4695878e86p13@Atp2b2
1.1e-29FFCP PHASE1:Mm9::chr10:75403311..75403323,-#_99293f6d197386bfa800bd4695878e86p3@ENSMUST00000059658, p3@uc007fts.1
1.1e-29FFCP PHASE1:Mm9::chr17:43498300..43498305,-#_99293f6d197386bfa800bd4695878e86p@chr17:43498300..43498305, -
1.1e-29FFCP PHASE1:Mm9::chr10:39254566..39254581,-#_99293f6d197386bfa800bd4695878e86p@chr10:39254566..39254581, -
1.1e-29FFCP PHASE2:Mm9::chr17:43498300..43498305,-#_99293f6d197386bfa800bd4695878e86p@chr17:43498300..43498305, -
1.1e-29FFCP PHASE1:Mm9::chr8:127851780..127851785,+#_99293f6d197386bfa800bd4695878e86p@chr8:127851780..127851785, +
1.1e-29FFCP PHASE1:Mm9::chr17:12881635..12881640,-#_99293f6d197386bfa800bd4695878e86p@chr17:12881635..12881640, -
1.1e-29FFCP PHASE2:Mm9::chr8:127851780..127851785,+#_99293f6d197386bfa800bd4695878e86p@chr8:127851780..127851785, +
3.06e-23FFCP PHASE2:Mm9::chr18:39041166..39041173,-#_f6c2b957ec58d71422846e3424e7eeb2p@chr18:39041166..39041173, -
3.06e-23FFCP PHASE1:Mm9::chr10:5484221..5484225,-#_f6c2b957ec58d71422846e3424e7eeb2p@chr10:5484221..5484225, -
3.06e-23FFCP PHASE1:Mm9::chr16:14275578..14275581,-#_f6c2b957ec58d71422846e3424e7eeb2p@chr16:14275578..14275581, -
3.06e-23FFCP PHASE1:Mm9::chr11:46079527..46079538,-#_f6c2b957ec58d71422846e3424e7eeb2p@chr11:46079527..46079538, -

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