UBERON:0001171: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{UBERON
|id=UBERON:0001171
|name=portal lobule
|namespace=
|def="the triangular region on the periphery of the liver lobules that contain a bile duct and a terminal branc...") |
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{{UBERON | {{UBERON | ||
| | |alt_id=UBERON:FMA_14653-MA_0002498 | ||
|comment=This class was created automatically from a combination of ontologies | |comment=This class was created automatically from a combination of ontologies | ||
|created_by= | |created_by= | ||
| | |def="the triangular region on the periphery of the liver lobules that contain a bile duct and a terminal branch of the hepatic artery and portal vein, and may also include a lymphatic vessel." [MP:0008992] | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|disjoint_from= | |||
|has_quality= | |has_quality= | ||
|id=UBERON:0001171 | |||
|is_a=UBERON:0000064 ;;UBERON:0004119 | |||
|is_obsolete= | |||
|located_in= | |located_in= | ||
|name=portal lobule | |||
|namespace=FANTOM | |||
|obo_creation_date= | |||
|part_of=UBERON:0001280 | |part_of=UBERON:0001280 | ||
|preceded_by= | |||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
|subset= | |||
|synonym= | |||
|union_of= | |||
|xref=FMA:14653;;MA:0002498;;ncithesaurus:Portal_Lobule | |||
}} | }} | ||
Latest revision as of 17:16, 12 September 2014
| Name: | portal lobule | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "the triangular region on the periphery of the liver lobules that contain a bile duct and a terminal branch of the hepatic artery and portal vein, and may also include a lymphatic vessel." [MP:0008992] | ||
| Xrefs: |
| ||
| Comments: | This class was created automatically from a combination of ontologies | ||
| Alt_id: | UBERON:FMA_14653-MA_0002498 |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0000064(organ part),UBERON:0004119(endoderm-derived structure) |
|---|---|
| part_of: | UBERON:0001280(liver parenchyma) |
Children
| part of: | UBERON:0001172 (hepatic acinus) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10536-107G5 (cholangiocellular carcinoma cell line:HuH-28)
- 10629-108H8
- 10630-108H9
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0001171 (portal lobule), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 5.42e-195 | FFCP PHASE2:Hg19::chr18:1101041..1101044,+#_e588f4566a83135924b10c3cee148352 | p@chr18:1101041..1101044, + |
| 5.42e-195 | FFCP PHASE2:Hg19::chr13:88008760..88008795,+#_e588f4566a83135924b10c3cee148352 | p@chr13:88008760..88008795, + |
| 5.42e-195 | FFCP PHASE1:Hg19::chr2:234545407..234545408,+#_e588f4566a83135924b10c3cee148352 | p9@UGT1A10 |
| 5.42e-195 | FFCP PHASE2:Hg19::chr2:234545407..234545408,+#_e588f4566a83135924b10c3cee148352 | p9@UGT1A10 |
| 5.42e-195 | FFCP PHASE1:Hg19::chr11:77795673..77795689,-#_e588f4566a83135924b10c3cee148352 | p@chr11:77795673..77795689, - |
| 5.42e-195 | FFCP PHASE1:Hg19::chr2:234545437..234545446,+#_e588f4566a83135924b10c3cee148352 | p4@UGT1A10 |
| 5.42e-195 | FFCP PHASE2:Hg19::chr2:234545437..234545446,+#_e588f4566a83135924b10c3cee148352 | p4@UGT1A10 |
| 5.42e-195 | FFCP PHASE2:Hg19::chr21:45826350..45826387,+#_e588f4566a83135924b10c3cee148352 | p22@TRPM2 |
| 5.42e-195 | FFCP PHASE1:Hg19::chr21:45826350..45826387,+#_e588f4566a83135924b10c3cee148352 | p22@TRPM2 |
| 5.42e-195 | FFCP PHASE1:Hg19::chr18:1101041..1101044,+#_e588f4566a83135924b10c3cee148352 | p@chr18:1101041..1101044, + |
| 5.42e-195 | FFCP PHASE1:Hg19::chr13:88008760..88008795,+#_e588f4566a83135924b10c3cee148352 | p@chr13:88008760..88008795, + |
| 5.42e-195 | FFCP PHASE1:Hg19::chr2:234545708..234545716,+#_e588f4566a83135924b10c3cee148352 | p5@UGT1A10 |
| 5.42e-195 | FFCP PHASE2:Hg19::chr2:234545708..234545716,+#_e588f4566a83135924b10c3cee148352 | p5@UGT1A10 |
| 5.42e-195 | FFCP PHASE1:Hg19::chr1:207059144..207059147,+#_e588f4566a83135924b10c3cee148352 | p@chr1:207059144..207059147, + |
| 5.42e-195 | FFCP PHASE2:Hg19::chr11:77795673..77795689,-#_e588f4566a83135924b10c3cee148352 | p@chr11:77795673..77795689, - |
| 5.42e-195 | FFCP PHASE2:Hg19::chr1:207059144..207059147,+#_e588f4566a83135924b10c3cee148352 | p@chr1:207059144..207059147, + |
| 5.42e-195 | FFCP PHASE1:Hg19::chr4:166513744..166513789,+#_e588f4566a83135924b10c3cee148352 | p@chr4:166513744..166513789, + |
| 5.42e-195 | FFCP PHASE2:Hg19::chr4:166513744..166513789,+#_e588f4566a83135924b10c3cee148352 | p@chr4:166513744..166513789, + |
| 9.37e-99 | FFCP PHASE1:Hg19::chr5:52786654..52786665,-#_04a1ddffbd0ab233d449829b951c3cae | p@chr5:52786654..52786665, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr5:52786654..52786665,-#_04a1ddffbd0ab233d449829b951c3cae | p@chr5:52786654..52786665, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr13:98605781..98605792,+#_04a1ddffbd0ab233d449829b951c3cae | p34@IPO5 |
| 9.37e-99 | FFCP PHASE2:Hg19::chr6:32522832..32522842,-#_04a1ddffbd0ab233d449829b951c3cae | p@chr6:32522832..32522842, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr11:73874637..73874639,+#_04a1ddffbd0ab233d449829b951c3cae | p@chr11:73874637..73874639, + |
| 9.37e-99 | FFCP PHASE1:Hg19::chr6:32522832..32522842,-#_04a1ddffbd0ab233d449829b951c3cae | p@chr6:32522832..32522842, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr2:158155402..158155409,-#_04a1ddffbd0ab233d449829b951c3cae | p3@ENST00000410472 |
| 9.37e-99 | FFCP PHASE2:Hg19::chr2:158155402..158155409,-#_04a1ddffbd0ab233d449829b951c3cae | p3@ENST00000410472 |
| 9.37e-99 | FFCP PHASE1:Hg19::chr13:98605781..98605792,+#_04a1ddffbd0ab233d449829b951c3cae | p34@IPO5 |
| 9.37e-99 | FFCP PHASE2:Hg19::chr11:73874637..73874639,+#_04a1ddffbd0ab233d449829b951c3cae | p@chr11:73874637..73874639, + |
| 2.55e-98 | FFCP PHASE1:Hg19::chr2:158005569..158005571,-#_5e234c6b5728c9167b27d853debda992 | p@chr2:158005569..158005571, - |
| 2.55e-98 | FFCP PHASE2:Hg19::chr2:158005569..158005571,-#_5e234c6b5728c9167b27d853debda992 | p@chr2:158005569..158005571, - |
| 2.55e-98 | FFCP PHASE2:Hg19::chr11:7904519..7904534,-#_5e234c6b5728c9167b27d853debda992 | p1@ENST00000529488, p1@ENST00000533634 |
| 2.55e-98 | FFCP PHASE1:Hg19::chr9:26936427..26936432,-#_5e234c6b5728c9167b27d853debda992 | p@chr9:26936427..26936432, - |
| 2.55e-98 | FFCP PHASE2:Hg19::chr9:26936427..26936432,-#_5e234c6b5728c9167b27d853debda992 | p@chr9:26936427..26936432, - |
| 2.55e-98 | FFCP PHASE2:Hg19::chrX:147062891..147062896,+#_5e234c6b5728c9167b27d853debda992 | p3@FMR1NB |
| 2.55e-98 | FFCP PHASE1:Hg19::chrX:147062891..147062896,+#_5e234c6b5728c9167b27d853debda992 | p3@FMR1NB |
| 2.55e-98 | FFCP PHASE1:Hg19::chr11:7904519..7904534,-#_5e234c6b5728c9167b27d853debda992 | p1@ENST00000529488, p1@ENST00000533634 |
| 1.23e-66 | FFCP PHASE1:Hg19::chr2:234545393..234545403,+#_d38bdd40c0bdccf3546e0e082c8459bf | p3@UGT1A10 |
| 1.23e-66 | FFCP PHASE2:Hg19::chr2:234545393..234545403,+#_d38bdd40c0bdccf3546e0e082c8459bf | p3@UGT1A10 |
| 1.23e-66 | FFCP PHASE1:Hg19::chr4:33469231..33469240,+#_d38bdd40c0bdccf3546e0e082c8459bf | p@chr4:33469231..33469240, + |
| 1.23e-66 | FFCP PHASE2:Hg19::chr4:33469231..33469240,+#_d38bdd40c0bdccf3546e0e082c8459bf | p@chr4:33469231..33469240, + |
| 1.23e-66 | FFCP PHASE2:Hg19::chr15:32969649..32969656,+#_d38bdd40c0bdccf3546e0e082c8459bf | p14@SCG5 |
| 1.23e-66 | FFCP PHASE1:Hg19::chr6:117747000..117747010,-#_d38bdd40c0bdccf3546e0e082c8459bf | p9@ROS1 |
| 1.23e-66 | FFCP PHASE2:Hg19::chr6:117747000..117747010,-#_d38bdd40c0bdccf3546e0e082c8459bf | p9@ROS1 |
| 1.23e-66 | FFCP PHASE1:Hg19::chr15:32969649..32969656,+#_d38bdd40c0bdccf3546e0e082c8459bf | p14@SCG5 |
| 2.39e-66 | FFCP PHASE1:Hg19::chr4:33469257..33469268,+#_7db76df55b891302e8534143dfd7ccd2 | p@chr4:33469257..33469268, + |
| 2.39e-66 | FFCP PHASE2:Hg19::chr4:33469257..33469268,+#_7db76df55b891302e8534143dfd7ccd2 | p@chr4:33469257..33469268, + |
| 4.66e-66 | FFCP PHASE2:Hg19::chr22:49769903..49769910,+#_f91f208eb17ded540bb69caf71e3288a | p@chr22:49769903..49769910, + |
| 4.66e-66 | FFCP PHASE1:Hg19::chr22:49769903..49769910,+#_f91f208eb17ded540bb69caf71e3288a | p@chr22:49769903..49769910, + |
| 1.46e-50 | FFCP PHASE2:Hg19::chr3:106556772..106556810,-#_5f35b44db3b9d8b91bb410020f44b8b3 | p@chr3:106556772..106556810, - |
| 1.46e-50 | FFCP PHASE2:Hg19::chr6:32522809..32522827,-#_5f35b44db3b9d8b91bb410020f44b8b3 | p@chr6:32522809..32522827, - |
| 1.46e-50 | FFCP PHASE1:Hg19::chr3:106556772..106556810,-#_5f35b44db3b9d8b91bb410020f44b8b3 | p@chr3:106556772..106556810, - |
| 1.46e-50 | FFCP PHASE1:Hg19::chr6:32522809..32522827,-#_5f35b44db3b9d8b91bb410020f44b8b3 | p@chr6:32522809..32522827, - |
| 1.46e-50 | FFCP PHASE2:Hg19::chr6:72255927..72255937,+#_5f35b44db3b9d8b91bb410020f44b8b3 | p@chr6:72255927..72255937, + |
| 1.46e-50 | FFCP PHASE2:Hg19::chr18:514455..514467,+#_5f35b44db3b9d8b91bb410020f44b8b3 | p@chr18:514455..514467, + |
| 1.46e-50 | FFCP PHASE1:Hg19::chr6:72255927..72255937,+#_5f35b44db3b9d8b91bb410020f44b8b3 | p@chr6:72255927..72255937, + |
| 1.46e-50 | FFCP PHASE1:Hg19::chr18:514455..514467,+#_5f35b44db3b9d8b91bb410020f44b8b3 | p@chr18:514455..514467, + |
| 2.42e-50 | FFCP PHASE1:Hg19::chr2:187867941..187867952,+#_d555018f248507d1e5a5e09b99f32052 | p1@ENST00000453517 |
| 2.42e-50 | FFCP PHASE2:Hg19::chr2:187867941..187867952,+#_d555018f248507d1e5a5e09b99f32052 | p1@ENST00000453517 |
| 2.42e-50 | FFCP PHASE1:Hg19::chr11:77794459..77794475,+#_d555018f248507d1e5a5e09b99f32052 | p@chr11:77794459..77794475, + |
| 2.42e-50 | FFCP PHASE2:Hg19::chr11:77794459..77794475,+#_d555018f248507d1e5a5e09b99f32052 | p@chr11:77794459..77794475, + |
| 2.42e-50 | FFCP PHASE2:Hg19::chr4:5526611..5526614,-#_d555018f248507d1e5a5e09b99f32052 | p@chr4:5526611..5526614, - |
| 2.42e-50 | FFCP PHASE1:Hg19::chr4:5526611..5526614,-#_d555018f248507d1e5a5e09b99f32052 | p@chr4:5526611..5526614, - |
| 3.99e-50 | FFCP PHASE2:Hg19::chr11:77792240..77792241,+#_572cff185fcf7d537b336a47c990fd1b | p@chr11:77792240..77792241, + |
| 3.99e-50 | FFCP PHASE2:Hg19::chr20:50479417..50479427,-#_572cff185fcf7d537b336a47c990fd1b | p2@ENST00000438154 |
| 3.99e-50 | FFCP PHASE1:Hg19::chr20:50479417..50479427,-#_572cff185fcf7d537b336a47c990fd1b | p2@ENST00000438154 |
| 3.99e-50 | FFCP PHASE2:Hg19::chr21:29774431..29774441,-#_572cff185fcf7d537b336a47c990fd1b | p@chr21:29774431..29774441, - |
| 3.99e-50 | FFCP PHASE1:Hg19::chr21:29774431..29774441,-#_572cff185fcf7d537b336a47c990fd1b | p@chr21:29774431..29774441, - |
| 3.99e-50 | FFCP PHASE2:Hg19::chr22:49769966..49769971,+#_572cff185fcf7d537b336a47c990fd1b | p@chr22:49769966..49769971, + |
| 3.99e-50 | FFCP PHASE1:Hg19::chr22:49769966..49769971,+#_572cff185fcf7d537b336a47c990fd1b | p@chr22:49769966..49769971, + |
| 3.99e-50 | FFCP PHASE1:Hg19::chr11:77792240..77792241,+#_572cff185fcf7d537b336a47c990fd1b | p@chr11:77792240..77792241, + |
| 3.99e-50 | FFCP PHASE2:Hg19::chr21:10597500..10597509,-#_572cff185fcf7d537b336a47c990fd1b | p2@uc011abv.1 |
| 3.99e-50 | FFCP PHASE1:Hg19::chr21:10597500..10597509,-#_572cff185fcf7d537b336a47c990fd1b | p2@uc011abv.1 |
| 6.58e-50 | FFCP PHASE1:Hg19::chr12:19928351..19928358,+#_8291670e5be0f55c66a64ce991b47165 | p2@ENST00000535764 |
| 6.58e-50 | FFCP PHASE2:Hg19::chr5:5146235..5146246,+#_8291670e5be0f55c66a64ce991b47165 | p7@ADAMTS16 |
| 6.58e-50 | FFCP PHASE1:Hg19::chr5:5146235..5146246,+#_8291670e5be0f55c66a64ce991b47165 | p7@ADAMTS16 |
| 6.58e-50 | FFCP PHASE2:Hg19::chr12:19928351..19928358,+#_8291670e5be0f55c66a64ce991b47165 | p2@ENST00000535764 |
| 6.58e-50 | FFCP PHASE2:Hg19::chr21:28899015..28899027,+#_8291670e5be0f55c66a64ce991b47165 | p@chr21:28899015..28899027, + |
| 6.58e-50 | FFCP PHASE1:Hg19::chr21:28899015..28899027,+#_8291670e5be0f55c66a64ce991b47165 | p@chr21:28899015..28899027, + |
| 6.58e-50 | FFCP PHASE2:Hg19::chrX:70798285..70798290,+#_8291670e5be0f55c66a64ce991b47165 | p1@ACRC |
| 6.58e-50 | FFCP PHASE1:Hg19::chrX:70798285..70798290,+#_8291670e5be0f55c66a64ce991b47165 | p1@ACRC |
| 6.62e-41 | FFCP PHASE1:Hg19::chr18:514484..514495,+#_7300ed0d2a5cec3a2f25f2d7a3f27594 | p@chr18:514484..514495, + |
| 6.62e-41 | FFCP PHASE1:Hg19::chr4:166513830..166513834,+#_7300ed0d2a5cec3a2f25f2d7a3f27594 | p@chr4:166513830..166513834, + |
| 6.62e-41 | FFCP PHASE2:Hg19::chr4:166513830..166513834,+#_7300ed0d2a5cec3a2f25f2d7a3f27594 | p@chr4:166513830..166513834, + |
| 6.62e-41 | FFCP PHASE2:Hg19::chrX:147062877..147062885,+#_7300ed0d2a5cec3a2f25f2d7a3f27594 | p2@FMR1NB |
| 6.62e-41 | FFCP PHASE1:Hg19::chrX:147062877..147062885,+#_7300ed0d2a5cec3a2f25f2d7a3f27594 | p2@FMR1NB |
| 6.62e-41 | FFCP PHASE1:Hg19::chr18:1099004..1099011,+#_7300ed0d2a5cec3a2f25f2d7a3f27594 | p@chr18:1099004..1099011, + |
| 6.62e-41 | FFCP PHASE2:Hg19::chr6:75912602..75912613,-#_7300ed0d2a5cec3a2f25f2d7a3f27594 | p25@COL12A1 |
| 6.62e-41 | FFCP PHASE2:Hg19::chr3:98275000..98275016,-#_7300ed0d2a5cec3a2f25f2d7a3f27594 | p@chr3:98275000..98275016, - |
| 6.62e-41 | FFCP PHASE1:Hg19::chr6:75912602..75912613,-#_7300ed0d2a5cec3a2f25f2d7a3f27594 | p25@COL12A1 |
| 6.62e-41 | FFCP PHASE1:Hg19::chr3:98275000..98275016,-#_7300ed0d2a5cec3a2f25f2d7a3f27594 | p@chr3:98275000..98275016, - |
| 6.62e-41 | FFCP PHASE2:Hg19::chr18:514484..514495,+#_7300ed0d2a5cec3a2f25f2d7a3f27594 | p@chr18:514484..514495, + |
| 6.62e-41 | FFCP PHASE1:Hg19::chr2:158155450..158155474,-#_7300ed0d2a5cec3a2f25f2d7a3f27594 | p1@ENST00000410472 |
| 6.62e-41 | FFCP PHASE2:Hg19::chr2:158155450..158155474,-#_7300ed0d2a5cec3a2f25f2d7a3f27594 | p1@ENST00000410472 |
| 6.62e-41 | FFCP PHASE2:Hg19::chr18:1099004..1099011,+#_7300ed0d2a5cec3a2f25f2d7a3f27594 | p@chr18:1099004..1099011, + |
| 6.62e-41 | FFCP PHASE1:Hg19::chr2:38402050..38402059,+#_7300ed0d2a5cec3a2f25f2d7a3f27594 | p@chr2:38402050..38402059, + |
| 6.62e-41 | FFCP PHASE2:Hg19::chr2:38402050..38402059,+#_7300ed0d2a5cec3a2f25f2d7a3f27594 | p@chr2:38402050..38402059, + |
| 9.91e-41 | FFCP PHASE1:Hg19::chr1:75600333..75600348,+#_a100a0247c212110b8c7ab9688f2304a | p5@LHX8 |
| 9.91e-41 | FFCP PHASE2:Hg19::chr1:75600333..75600348,+#_a100a0247c212110b8c7ab9688f2304a | p5@LHX8 |
| 9.91e-41 | FFCP PHASE2:Hg19::chr12:127737083..127737103,-#_a100a0247c212110b8c7ab9688f2304a | p@chr12:127737083..127737103, - |
| 9.91e-41 | FFCP PHASE2:Hg19::chr6:67772946..67772961,+#_a100a0247c212110b8c7ab9688f2304a | p@chr6:67772946..67772961, + |
