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{{UBERON
{{UBERON
|id=UBERON:0001256
|alt_id=UBERON:FMA_15902-MA_0002493
|name=wall of urinary bladder
|namespace=
|def="An anatomical wall that is part of a urinary bladder [Obol]." [OBOL:automatic]
|xref=BTO:0001462;;FMA:15902;;MA:0002493;;ncithesaurus:Bladder_Wall;;SCTID:362225003
|is_a=UBERON:0000060;;UBERON:0000077;;UBERON:0006554
|synonym="anatomical wall of bladder" EXACT [OBOL:automatic];;"anatomical wall of urinary bladder" EXACT [OBOL:automatic];;"bladder anatomical wall" EXACT [OBOL:automatic];;"bladder wall" EXACT [OBOL:automatic];;"urinary bladder anatomical wall" EXACT [OBOL:automatic];;"urinary bladder wall" EXACT [];;"wall of bladder" EXACT [OBOL:automatic]
|comment=This class was created automatically from a combination of ontologies
|comment=This class was created automatically from a combination of ontologies
|alt_id=UBERON:FMA_15902-MA_0002493
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="An anatomical wall that is part of a urinary bladder [Obol]." [OBOL:automatic]
|subset=
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0001256
|is_a=UBERON:0000060 ;;UBERON:0004120 ;;UBERON:0006554
|is_obsolete=
|located_in=
|located_in=
|name=wall of urinary bladder
|namespace=FANTOM
|obo_creation_date=
|part_of=UBERON:0001255
|part_of=UBERON:0001255
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym="anatomical wall of bladder" EXACT [OBOL:automatic];;"anatomical wall of urinary bladder" EXACT [OBOL:automatic];;"bladder anatomical wall" EXACT [OBOL:automatic];;"bladder wall" EXACT [OBOL:automatic];;"urinary bladder anatomical wall" EXACT [OBOL:automatic];;"urinary bladder wall" EXACT [];;"wall of bladder" EXACT [OBOL:automatic]
|union_of=
|xref=BTO:0001462;;FMA:15902;;MA:0002493;;ncithesaurus:Bladder_Wall;;SCTID:362225003
}}
}}

Latest revision as of 17:17, 12 September 2014

Name:wall of urinary bladder
Namespace:FANTOM
Definition:"An anatomical wall that is part of a urinary bladder [Obol]." [OBOL:automatic]
Xrefs:
links:

BTO:0001462
FMA:15902
MA:0002493
ncithesaurus:Bladder_Wall

SCTID:362225003
Synonyms: "anatomical wall of bladder" EXACT [OBOL:automatic]
"anatomical wall of urinary bladder" EXACT [OBOL:automatic]
"bladder anatomical wall" EXACT [OBOL:automatic]
"bladder wall" EXACT [OBOL:automatic]
"urinary bladder anatomical wall" EXACT [OBOL:automatic]
"urinary bladder wall" EXACT []
"wall of bladder" EXACT [OBOL:automatic]
Comments:This class was created automatically from a combination of ontologies
Alt_id: UBERON:FMA_15902-MA_0002493

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0000060(anatomical wall),UBERON:0004120(mesoderm-derived structure),UBERON:0006554(urinary system structure)
part_of:UBERON:0001255(urinary bladder)



Children

part of:UBERON:0001259 (mucosa of urinary bladder)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0001256 (wall of urinary bladder), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
5.42e-195FFCP PHASE2:Hg19::chr15:101282110..101282113,+#_025f73d125de9b43a5ebf7ffa8e2ec71p@chr15:101282110..101282113, +
5.42e-195FFCP PHASE1:Hg19::chr15:101282110..101282113,+#_025f73d125de9b43a5ebf7ffa8e2ec71p@chr15:101282110..101282113, +
5.42e-195FFCP PHASE2:Hg19::chr10:5660248..5660254,-#_025f73d125de9b43a5ebf7ffa8e2ec71p2@ENST00000427341
5.42e-195FFCP PHASE1:Hg19::chr10:5660248..5660254,-#_025f73d125de9b43a5ebf7ffa8e2ec71p2@ENST00000427341
9.37e-99FFCP PHASE1:Hg19::chr21:39627877..39627884,+#_4eef21840138c1aa574c0b161e22db78p@chr21:39627877..39627884, +
9.37e-99FFCP PHASE2:Hg19::chr6:21588091..21588098,-#_4eef21840138c1aa574c0b161e22db78p@chr6:21588091..21588098, -
9.37e-99FFCP PHASE1:Hg19::chr3:13992334..13992338,-#_4eef21840138c1aa574c0b161e22db78p@chr3:13992334..13992338, -
9.37e-99FFCP PHASE1:Hg19::chr6:21664489..21664494,+#_4eef21840138c1aa574c0b161e22db78p@chr6:21664489..21664494, +
9.37e-99FFCP PHASE2:Hg19::chr6:21664489..21664494,+#_4eef21840138c1aa574c0b161e22db78p@chr6:21664489..21664494, +
9.37e-99FFCP PHASE1:Hg19::chr6:21666284..21666297,+#_4eef21840138c1aa574c0b161e22db78p26@LINC00340
9.37e-99FFCP PHASE2:Hg19::chr6:21666284..21666297,+#_4eef21840138c1aa574c0b161e22db78p26@LINC00340
9.37e-99FFCP PHASE1:Hg19::chr6:21383702..21383704,+#_4eef21840138c1aa574c0b161e22db78p@chr6:21383702..21383704, +
9.37e-99FFCP PHASE2:Hg19::chr6:21383702..21383704,+#_4eef21840138c1aa574c0b161e22db78p@chr6:21383702..21383704, +
9.37e-99FFCP PHASE2:Hg19::chr21:39627877..39627884,+#_4eef21840138c1aa574c0b161e22db78p@chr21:39627877..39627884, +
9.37e-99FFCP PHASE2:Hg19::chr3:13992334..13992338,-#_4eef21840138c1aa574c0b161e22db78p@chr3:13992334..13992338, -
9.37e-99FFCP PHASE1:Hg19::chr6:21588091..21588098,-#_4eef21840138c1aa574c0b161e22db78p@chr6:21588091..21588098, -
2.55e-98FFCP PHASE1:Hg19::chr6:21876977..21876981,+#_332f050feea582e4b9d6992dd78d4fdep@chr6:21876977..21876981, +
2.55e-98FFCP PHASE1:Hg19::chr1:233430709..233430711,+#_332f050feea582e4b9d6992dd78d4fdep@chr1:233430709..233430711, +
2.55e-98FFCP PHASE2:Hg19::chr6:21876977..21876981,+#_332f050feea582e4b9d6992dd78d4fdep@chr6:21876977..21876981, +
2.55e-98FFCP PHASE2:Hg19::chr1:233430709..233430711,+#_332f050feea582e4b9d6992dd78d4fdep@chr1:233430709..233430711, +
1.23e-66FFCP PHASE2:Hg19::chr13:96459990..96459992,+#_67bf214a3b5b35399f60a39e438b23b4p@chr13:96459990..96459992, +
1.23e-66FFCP PHASE1:Hg19::chr13:96459990..96459992,+#_67bf214a3b5b35399f60a39e438b23b4p@chr13:96459990..96459992, +
1.23e-66FFCP PHASE1:Hg19::chr6:21664412..21664419,+#_67bf214a3b5b35399f60a39e438b23b4p@chr6:21664412..21664419, +
1.23e-66FFCP PHASE2:Hg19::chr6:21664412..21664419,+#_67bf214a3b5b35399f60a39e438b23b4p@chr6:21664412..21664419, +
2.39e-66FFCP PHASE1:Hg19::chr15:79296342..79296353,-#_c8056f79b80b4fa59eff8a1db491cf0ep@chr15:79296342..79296353, -
2.39e-66FFCP PHASE1:Hg19::chr6:20534754..20534756,-#_c8056f79b80b4fa59eff8a1db491cf0ep@chr6:20534754..20534756, -
2.39e-66FFCP PHASE2:Hg19::chr6:20534754..20534756,-#_c8056f79b80b4fa59eff8a1db491cf0ep@chr6:20534754..20534756, -
2.39e-66FFCP PHASE2:Hg19::chr2:176971270..176971277,-#_c8056f79b80b4fa59eff8a1db491cf0ep@chr2:176971270..176971277, -
2.39e-66FFCP PHASE1:Hg19::chr2:176971270..176971277,-#_c8056f79b80b4fa59eff8a1db491cf0ep@chr2:176971270..176971277, -
2.39e-66FFCP PHASE2:Hg19::chr11:69867053..69867065,-#_c8056f79b80b4fa59eff8a1db491cf0ep2@ENST00000528507
2.39e-66FFCP PHASE1:Hg19::chr11:69867053..69867065,-#_c8056f79b80b4fa59eff8a1db491cf0ep2@ENST00000528507
2.39e-66FFCP PHASE2:Hg19::chr15:79296342..79296353,-#_c8056f79b80b4fa59eff8a1db491cf0ep@chr15:79296342..79296353, -
4.66e-66FFCP PHASE2:Hg19::chr11:92613787..92613796,+#_b12a4e83138fcf1e89cf606234c489ecp@chr11:92613787..92613796, +
4.66e-66FFCP PHASE1:Hg19::chr11:92613787..92613796,+#_b12a4e83138fcf1e89cf606234c489ecp@chr11:92613787..92613796, +
4.66e-66FFCP PHASE2:Hg19::chr14:80855894..80855900,+#_b12a4e83138fcf1e89cf606234c489ecp@chr14:80855894..80855900, +
4.66e-66FFCP PHASE1:Hg19::chr14:80855894..80855900,+#_b12a4e83138fcf1e89cf606234c489ecp@chr14:80855894..80855900, +
4.66e-66FFCP PHASE2:Hg19::chr15:40544787..40544798,+#_b12a4e83138fcf1e89cf606234c489ecp23@PAK6
4.66e-66FFCP PHASE1:Hg19::chr15:40544787..40544798,+#_b12a4e83138fcf1e89cf606234c489ecp23@PAK6
1.46e-50FFCP PHASE2:Hg19::chr6:21665113..21665128,-#_df3ba2a07558757d48580e6d5f56dcb2p@chr6:21665113..21665128, -
1.46e-50FFCP PHASE1:Hg19::chr6:21665769..21665780,+#_df3ba2a07558757d48580e6d5f56dcb2p@chr6:21665769..21665780, +
1.46e-50FFCP PHASE2:Hg19::chr6:21665769..21665780,+#_df3ba2a07558757d48580e6d5f56dcb2p@chr6:21665769..21665780, +
1.46e-50FFCP PHASE1:Hg19::chr6:21022855..21022892,+#_df3ba2a07558757d48580e6d5f56dcb2p@chr6:21022855..21022892, +
1.46e-50FFCP PHASE2:Hg19::chr6:21022855..21022892,+#_df3ba2a07558757d48580e6d5f56dcb2p@chr6:21022855..21022892, +
1.46e-50FFCP PHASE1:Hg19::chr6:21665113..21665128,-#_df3ba2a07558757d48580e6d5f56dcb2p@chr6:21665113..21665128, -
3.99e-50FFCP PHASE2:Hg19::chr17:4699695..4699699,-#_aa8089118f2a71f4ad8b2bafcecff3b3p@chr17:4699695..4699699, -
3.99e-50FFCP PHASE1:Hg19::chr17:4699695..4699699,-#_aa8089118f2a71f4ad8b2bafcecff3b3p@chr17:4699695..4699699, -
9.91e-41FFCP PHASE2:Hg19::chr10:30046722..30046725,-#_0a25a2146ff74421da52e77bea70c628p@chr10:30046722..30046725, -
9.91e-41FFCP PHASE1:Hg19::chr10:30046722..30046725,-#_0a25a2146ff74421da52e77bea70c628p@chr10:30046722..30046725, -
9.91e-41FFCP PHASE2:Hg19::chr5:57555322..57555334,-#_0a25a2146ff74421da52e77bea70c628p@chr5:57555322..57555334, -
9.91e-41FFCP PHASE1:Hg19::chr6:22221030..22221034,+#_0a25a2146ff74421da52e77bea70c628p1@AL117559
9.91e-41FFCP PHASE2:Hg19::chr6:22221030..22221034,+#_0a25a2146ff74421da52e77bea70c628p1@AL117559
9.91e-41FFCP PHASE1:Hg19::chr5:57555322..57555334,-#_0a25a2146ff74421da52e77bea70c628p@chr5:57555322..57555334, -
1.48e-40FFCP PHASE2:Hg19::chr10:30151938..30151956,-#_49f85fa9b51b17ee5aa47608770f4492p@chr10:30151938..30151956, -
1.48e-40FFCP PHASE1:Hg19::chr10:30151938..30151956,-#_49f85fa9b51b17ee5aa47608770f4492p@chr10:30151938..30151956, -
1.48e-40FFCP PHASE2:Hg19::chr17:2264983..2264992,+#_49f85fa9b51b17ee5aa47608770f4492p@chr17:2264983..2264992, +
1.48e-40FFCP PHASE1:Hg19::chr17:2264983..2264992,+#_49f85fa9b51b17ee5aa47608770f4492p@chr17:2264983..2264992, +
3.3e-40FFCP PHASE2:Hg19::chr19:48102065..48102072,+#_e3c6492321377ea954d6a92e2be87441p@chr19:48102065..48102072, +
3.3e-40FFCP PHASE1:Hg19::chr19:48102065..48102072,+#_e3c6492321377ea954d6a92e2be87441p@chr19:48102065..48102072, +
3.3e-40FFCP PHASE2:Hg19::chr15:101417937..101417955,+#_e3c6492321377ea954d6a92e2be87441p8@ALDH1A3
3.3e-40FFCP PHASE1:Hg19::chr15:101417937..101417955,+#_e3c6492321377ea954d6a92e2be87441p8@ALDH1A3
1.84e-34FFCP PHASE1:Hg19::chr6:21680979..21680984,+#_948870d2fc9c276949d4790f9c97892ap@chr6:21680979..21680984, +
1.84e-34FFCP PHASE2:Hg19::chr6:21680979..21680984,+#_948870d2fc9c276949d4790f9c97892ap@chr6:21680979..21680984, +
2.58e-34FFCP PHASE2:Hg19::chr6:21070033..21070038,+#_0eaf55cb6cf14973a7e215bef682660bp@chr6:21070033..21070038, +
2.58e-34FFCP PHASE2:Hg19::chr2:177042702..177042725,-#_0eaf55cb6cf14973a7e215bef682660bp2@uc002uku.2
2.58e-34FFCP PHASE2:Hg19::chr4:183752843..183752848,+#_0eaf55cb6cf14973a7e215bef682660bp@chr4:183752843..183752848, +
2.58e-34FFCP PHASE1:Hg19::chr2:177042702..177042725,-#_0eaf55cb6cf14973a7e215bef682660bp2@uc002uku.2
2.58e-34FFCP PHASE1:Hg19::chr4:183752843..183752848,+#_0eaf55cb6cf14973a7e215bef682660bp@chr4:183752843..183752848, +
2.58e-34FFCP PHASE1:Hg19::chr6:21070033..21070038,+#_0eaf55cb6cf14973a7e215bef682660bp@chr6:21070033..21070038, +
3.61e-34FFCP PHASE2:Hg19::chr6:22047883..22047886,+#_dc05a91fa890232f62bad186389b2a8ep@chr6:22047883..22047886, +
3.61e-34FFCP PHASE1:Hg19::chr6:22047883..22047886,+#_dc05a91fa890232f62bad186389b2a8ep@chr6:22047883..22047886, +
5.05e-34FFCP PHASE2:Hg19::chr19:34618510..34618515,-#_3fce1bea53b242718a864be624bd7507p@chr19:34618510..34618515, -
5.05e-34FFCP PHASE1:Hg19::chr19:34618510..34618515,-#_3fce1bea53b242718a864be624bd7507p@chr19:34618510..34618515, -
7.48e-30FFCP PHASE2:Hg19::chr5:54179495..54179507,+#_29181e6e8514e38332b58837c5d1177ap@chr5:54179495..54179507, +
7.48e-30FFCP PHASE1:Hg19::chr5:54179495..54179507,+#_29181e6e8514e38332b58837c5d1177ap@chr5:54179495..54179507, +
7.48e-30FFCP PHASE1:Hg19::chr6:20402608..20402629,+#_29181e6e8514e38332b58837c5d1177ap13@E2F3
7.48e-30FFCP PHASE2:Hg19::chr1:52629146..52629156,-#_29181e6e8514e38332b58837c5d1177ap1@ENST00000412785
7.48e-30FFCP PHASE2:Hg19::chr6:20402608..20402629,+#_29181e6e8514e38332b58837c5d1177ap13@E2F3
7.48e-30FFCP PHASE1:Hg19::chr1:52629146..52629156,-#_29181e6e8514e38332b58837c5d1177ap1@ENST00000412785
7.48e-30FFCP PHASE1:Hg19::chr6:21665095..21665110,-#_29181e6e8514e38332b58837c5d1177ap@chr6:21665095..21665110, -
7.48e-30FFCP PHASE2:Hg19::chr6:21665095..21665110,-#_29181e6e8514e38332b58837c5d1177ap@chr6:21665095..21665110, -
2.37e-29FFCP PHASE1:Hg19::chr6:161454984..161455010,+#_2e8122ef06bbd2366a312b468954ea4ap14@MAP3K4
2.37e-29FFCP PHASE2:Hg19::chr6:161454984..161455010,+#_2e8122ef06bbd2366a312b468954ea4ap14@MAP3K4
2.37e-29FFCP PHASE2:Hg19::chr2:109605543..109605554,-#_2e8122ef06bbd2366a312b468954ea4ap4@EDAR
2.37e-29FFCP PHASE1:Hg19::chr2:109605543..109605554,-#_2e8122ef06bbd2366a312b468954ea4ap4@EDAR
4.2e-29FFCP PHASE1:Hg19::chrX:104100378..104100381,+#_d740ed2727ad4738a9b9649b28c65eb6p@chrX:104100378..104100381, +
4.2e-29FFCP PHASE2:Hg19::chrX:104100378..104100381,+#_d740ed2727ad4738a9b9649b28c65eb6p@chrX:104100378..104100381, +
2.78e-26FFCP PHASE1:Hg19::chr6:21933119..21933123,+#_9d02dc042779942805b4e2cf6b40b6fbp@chr6:21933119..21933123, +
2.78e-26FFCP PHASE2:Hg19::chr6:21933119..21933123,+#_9d02dc042779942805b4e2cf6b40b6fbp@chr6:21933119..21933123, +
2.78e-26FFCP PHASE2:Hg19::chr13:107029084..107029103,+#_9d02dc042779942805b4e2cf6b40b6fbp4@LINC00460
2.78e-26FFCP PHASE1:Hg19::chr13:107029084..107029103,+#_9d02dc042779942805b4e2cf6b40b6fbp4@LINC00460
3.58e-26FFCP PHASE1:Hg19::chr3:104180688..104180692,+#_17991e212334b21331b6f17f12734fddp@chr3:104180688..104180692, +
3.58e-26FFCP PHASE2:Hg19::chr3:104180688..104180692,+#_17991e212334b21331b6f17f12734fddp@chr3:104180688..104180692, +
4.61e-26FFCP PHASE2:Hg19::chr7:121156367..121156370,-#_9ab61504d6ba67f56fbaf1d23aea157fp@chr7:121156367..121156370, -
4.61e-26FFCP PHASE1:Hg19::chr9:93960724..93960730,+#_9ab61504d6ba67f56fbaf1d23aea157fp@chr9:93960724..93960730, +
4.61e-26FFCP PHASE1:Hg19::chr1:12239065..12239070,-#_9ab61504d6ba67f56fbaf1d23aea157fp@chr1:12239065..12239070, -
4.61e-26FFCP PHASE2:Hg19::chr9:93960724..93960730,+#_9ab61504d6ba67f56fbaf1d23aea157fp@chr9:93960724..93960730, +
4.61e-26FFCP PHASE2:Hg19::chr15:101418003..101418019,+#_9ab61504d6ba67f56fbaf1d23aea157fp5@ALDH1A3
4.61e-26FFCP PHASE1:Hg19::chr15:101418003..101418019,+#_9ab61504d6ba67f56fbaf1d23aea157fp5@ALDH1A3
4.61e-26FFCP PHASE1:Hg19::chr7:121156367..121156370,-#_9ab61504d6ba67f56fbaf1d23aea157fp@chr7:121156367..121156370, -
4.61e-26FFCP PHASE2:Hg19::chr1:12239065..12239070,-#_9ab61504d6ba67f56fbaf1d23aea157fp@chr1:12239065..12239070, -

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