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|located_in=
|located_in=
|name=temporal bone
|name=temporal bone
|namespace=
|namespace=FANTOM
|obo_creation_date=
|obo_creation_date=
|part_of=UBERON:0004339
|part_of=UBERON:0004339

Latest revision as of 17:19, 12 September 2014

Name:temporal bone
Namespace:FANTOM
Definition:"The temporal bones are situated at the sides and base of the skull, and lateral to the temporal lobes of the cerebrum." [Wikipedia:Temporal_bone]
Xrefs:
links:

EHDAA:6035
EMAPA:17682
EMAPA:18020
FMA:52737
GAID:232
[1]
[2]
MA:0001476
MESH:A.02.835.232.781.885
ncithesaurus:Temporal_Bone
OpenCyc:Mx4rvbkAk5wpEbGdrcN5Y29ycA
SCTID:181795004

VHOG:0000800
Synonyms: "os temporale" RELATED LATIN [Wikipedia:Temporal_bone]
Comments:The temporal bone consists of four parts: * Squama temporalis * Mastoid portion * Petrous portion (Petrosal ridge) * Tympanic part[WP]. AO notes: Note the Temporal bone is not explicitly categorized to a part of the cranium in FMA. Taxon notes: fusion of squamosal + angular (tympanic annulus) [derm] + petrosal (prootic + opisthotic)[chond] + styloid process[splanc.]
Alt_id: UBERON:FMA_52737-MA_0001476
Subset: uberon_slim

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0003462(facial bone),UBERON:0008193(pneumatized bone),UBERON:0015212(lateral structure)
part_of:UBERON:0004339(calvarium)



Children

part of:UBERON:0001694 (petrous part of temporal bone)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Mouse (Mus musculus)

  • 12157-128G6 (Sox2+ Supporting cells - organ of corti, pool1)
  • 12158-128G7 (Atoh+ Inner ear hair cells - organ of corti, pool1)
  • 12215-129E1 (Inner ear stem cells, 1st generation stem cells, pool1)
  • 12216-129E2 (Inner ear stem cells, 4th generation stem cells, pool1)
  • 12217-129E3 (Inner ear stem cells, differentiation, day03, pool1)
  • 12218-129E4 (Inner ear stem cells, differentiation, day10, pool1)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0001678 (temporal bone), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.87e-86FFCP PHASE2:Mm9::chr5:21371424..21371435,-#_329b6ed7138a6c61a2ec9877f02c3792p2@Slc26a5
1.87e-86FFCP PHASE2:Mm9::chr11:120222470..120222516,+#_329b6ed7138a6c61a2ec9877f02c3792p2@Fscn2
1.87e-86FFCP PHASE1:Mm9::chr3:35012425..35012439,+#_329b6ed7138a6c61a2ec9877f02c3792p@chr3:35012425..35012439, +
1.87e-86FFCP PHASE1:Mm9::chr15:89215319..89215330,+#_329b6ed7138a6c61a2ec9877f02c3792p@chr15:89215319..89215330, +
1.87e-86FFCP PHASE2:Mm9::chr11:102123554..102123566,+#_329b6ed7138a6c61a2ec9877f02c3792p4@BC030867
1.87e-86FFCP PHASE2:Mm9::chr5:28035962..28035983,+#_329b6ed7138a6c61a2ec9877f02c3792p@chr5:28035962..28035983, +
1.87e-86FFCP PHASE1:Mm9::chr1:172843796..172843799,-#_329b6ed7138a6c61a2ec9877f02c3792p@chr1:172843796..172843799, -
1.87e-86FFCP PHASE2:Mm9::chr3:81012915..81012923,+#_329b6ed7138a6c61a2ec9877f02c3792p@chr3:81012915..81012923, +
1.87e-86FFCP PHASE2:Mm9::chr10:107349309..107349318,-#_329b6ed7138a6c61a2ec9877f02c3792p4@Otogl
1.87e-86FFCP PHASE1:Mm9::chr5:68423014..68423037,+#_329b6ed7138a6c61a2ec9877f02c3792p1@Grxcr1
1.87e-86FFCP PHASE1:Mm9::chr18:66033526..66033539,-#_329b6ed7138a6c61a2ec9877f02c3792p@chr18:66033526..66033539, -
1.87e-86FFCP PHASE1:Mm9::chr16:93971357..93971363,-#_329b6ed7138a6c61a2ec9877f02c3792p@chr16:93971357..93971363, -
1.87e-86FFCP PHASE2:Mm9::chr17:13983179..13983190,+#_329b6ed7138a6c61a2ec9877f02c3792p@chr17:13983179..13983190, +
1.87e-86FFCP PHASE1:Mm9::chr9:42207965..42207978,-#_329b6ed7138a6c61a2ec9877f02c3792p5@Tecta
1.87e-86FFCP PHASE2:Mm9::chr9:42206784..42206793,-#_329b6ed7138a6c61a2ec9877f02c3792p@chr9:42206784..42206793, -
1.87e-86FFCP PHASE2:Mm9::chr19:55255289..55255299,+#_329b6ed7138a6c61a2ec9877f02c3792p2@Tectb
1.87e-86FFCP PHASE1:Mm9::chr3:154459184..154459195,+#_329b6ed7138a6c61a2ec9877f02c3792p@chr3:154459184..154459195, +
1.87e-86FFCP PHASE2:Mm9::chr13:78257518..78257522,+#_329b6ed7138a6c61a2ec9877f02c3792p@chr13:78257518..78257522, +
1.87e-86FFCP PHASE2:Mm9::chr1:16651649..16651655,+#_329b6ed7138a6c61a2ec9877f02c3792p@chr1:16651649..16651655, +
1.87e-86FFCP PHASE1:Mm9::chr14:102297728..102297742,+#_329b6ed7138a6c61a2ec9877f02c3792p@chr14:102297728..102297742, +
1.87e-86FFCP PHASE2:Mm9::chr2:29935952..29935993,+#_329b6ed7138a6c61a2ec9877f02c3792p7@Pkn3
1.87e-86FFCP PHASE1:Mm9::chr5:30710416..30710440,-#_329b6ed7138a6c61a2ec9877f02c3792p2@Otof
1.87e-86FFCP PHASE1:Mm9::chr11:114603036..114603048,+#_329b6ed7138a6c61a2ec9877f02c3792p@chr11:114603036..114603048, +
1.87e-86FFCP PHASE1:Mm9::chr9:42206784..42206793,-#_329b6ed7138a6c61a2ec9877f02c3792p@chr9:42206784..42206793, -
1.87e-86FFCP PHASE1:Mm9::chr2:67011941..67011951,+#_329b6ed7138a6c61a2ec9877f02c3792p3@Gm1322
1.87e-86FFCP PHASE2:Mm9::chr1:93235228..93235249,+#_329b6ed7138a6c61a2ec9877f02c3792p@chr1:93235228..93235249, +
1.87e-86FFCP PHASE2:Mm9::chr15:12848147..12848162,+#_329b6ed7138a6c61a2ec9877f02c3792p@chr15:12848147..12848162, +
1.87e-86FFCP PHASE1:Mm9::chr4:154208086..154208123,+#_329b6ed7138a6c61a2ec9877f02c3792p@chr4:154208086..154208123, +
1.87e-86FFCP PHASE1:Mm9::chr17:31335903..31335921,-#_329b6ed7138a6c61a2ec9877f02c3792p2@Tmprss3
1.87e-86FFCP PHASE2:Mm9::chr11:8405038..8405048,-#_329b6ed7138a6c61a2ec9877f02c3792p@chr11:8405038..8405048, -
1.87e-86FFCP PHASE2:Mm9::chr7:109265277..109265288,-#_329b6ed7138a6c61a2ec9877f02c3792p4@Chrna10
1.87e-86FFCP PHASE2:Mm9::chr19:21028739..21028785,-#_329b6ed7138a6c61a2ec9877f02c3792p1@Tmc1
1.87e-86FFCP PHASE1:Mm9::chr14:47293496..47293510,-#_329b6ed7138a6c61a2ec9877f02c3792p@chr14:47293496..47293510, -
1.87e-86FFCP PHASE2:Mm9::chr2:9811162..9811171,-#_329b6ed7138a6c61a2ec9877f02c3792p2@9230102O04Rik
1.87e-86FFCP PHASE1:Mm9::chr11:4689837..4689845,-#_329b6ed7138a6c61a2ec9877f02c3792p@chr11:4689837..4689845, -
1.87e-86FFCP PHASE2:Mm9::chr14:102297728..102297742,+#_329b6ed7138a6c61a2ec9877f02c3792p@chr14:102297728..102297742, +
1.87e-86FFCP PHASE1:Mm9::chr9:50968647..50968668,-#_329b6ed7138a6c61a2ec9877f02c3792p@chr9:50968647..50968668, -
1.87e-86FFCP PHASE2:Mm9::chr9:42207792..42207805,-#_329b6ed7138a6c61a2ec9877f02c3792p11@Tecta
1.87e-86FFCP PHASE1:Mm9::chr8:13414266..13414279,+#_329b6ed7138a6c61a2ec9877f02c3792p@chr8:13414266..13414279, +
1.87e-86FFCP PHASE1:Mm9::chr13:78257454..78257465,+#_329b6ed7138a6c61a2ec9877f02c3792p@chr13:78257454..78257465, +
1.87e-86FFCP PHASE1:Mm9::chr12:13572961..13572974,+#_329b6ed7138a6c61a2ec9877f02c3792p@chr12:13572961..13572974, +
1.87e-86FFCP PHASE2:Mm9::chr15:89215306..89215315,+#_329b6ed7138a6c61a2ec9877f02c3792p@chr15:89215306..89215315, +
1.87e-86FFCP PHASE2:Mm9::chr7:109052262..109052291,-#_329b6ed7138a6c61a2ec9877f02c3792p1@Tomt
1.87e-86FFCP PHASE2:Mm9::chr5:30710403..30710406,-#_329b6ed7138a6c61a2ec9877f02c3792p10@Otof
1.87e-86FFCP PHASE1:Mm9::chr14:20649897..20649907,+#_329b6ed7138a6c61a2ec9877f02c3792p@chr14:20649897..20649907, +
1.87e-86FFCP PHASE1:Mm9::chr18:81327205..81327211,+#_329b6ed7138a6c61a2ec9877f02c3792p@chr18:81327205..81327211, +
1.87e-86FFCP PHASE2:Mm9::chr17:31335953..31335957,-#_329b6ed7138a6c61a2ec9877f02c3792p3@Tmprss3
1.87e-86FFCP PHASE1:Mm9::chr11:94371127..94371139,-#_329b6ed7138a6c61a2ec9877f02c3792p@chr11:94371127..94371139, -
1.87e-86FFCP PHASE2:Mm9::chr12:109905399..109905416,+#_329b6ed7138a6c61a2ec9877f02c3792p@chr12:109905399..109905416, +
1.87e-86FFCP PHASE1:Mm9::chr3:31585340..31585360,+#_329b6ed7138a6c61a2ec9877f02c3792p@chr3:31585340..31585360, +
1.87e-86FFCP PHASE2:Mm9::chr4:101908153..101908163,+#_329b6ed7138a6c61a2ec9877f02c3792p@chr4:101908153..101908163, +
1.87e-86FFCP PHASE2:Mm9::chr16:93971357..93971363,-#_329b6ed7138a6c61a2ec9877f02c3792p@chr16:93971357..93971363, -
1.87e-86FFCP PHASE1:Mm9::chr8:94180607..94180619,-#_329b6ed7138a6c61a2ec9877f02c3792p@chr8:94180607..94180619, -
1.87e-86FFCP PHASE1:Mm9::chr2:170417150..170417155,-#_329b6ed7138a6c61a2ec9877f02c3792p@chr2:170417150..170417155, -
1.87e-86FFCP PHASE1:Mm9::chr4:115556989..115556997,+#_329b6ed7138a6c61a2ec9877f02c3792p1@Kncn
1.87e-86FFCP PHASE1:Mm9::chr18:59222033..59222043,+#_329b6ed7138a6c61a2ec9877f02c3792p7@A730017C20Rik
1.87e-86FFCP PHASE2:Mm9::chr8:13414289..13414295,+#_329b6ed7138a6c61a2ec9877f02c3792p@chr8:13414289..13414295, +
1.87e-86FFCP PHASE2:Mm9::chr9:66860888..66860899,+#_329b6ed7138a6c61a2ec9877f02c3792p@chr9:66860888..66860899, +
1.87e-86FFCP PHASE2:Mm9::chr2:53464178..53464186,+#_329b6ed7138a6c61a2ec9877f02c3792p@chr2:53464178..53464186, +
1.87e-86FFCP PHASE1:Mm9::chr9:42207792..42207805,-#_329b6ed7138a6c61a2ec9877f02c3792p11@Tecta
1.87e-86FFCP PHASE1:Mm9::chr2:73232344..73232356,-#_329b6ed7138a6c61a2ec9877f02c3792p@chr2:73232344..73232356, -
1.87e-86FFCP PHASE1:Mm9::chr1:93218682..93218691,+#_329b6ed7138a6c61a2ec9877f02c3792p2@Espnl
1.87e-86FFCP PHASE1:Mm9::chr10:107349378..107349390,-#_329b6ed7138a6c61a2ec9877f02c3792p1@Otogl
1.87e-86FFCP PHASE1:Mm9::chr7:88068153..88068160,-#_329b6ed7138a6c61a2ec9877f02c3792p10@Sec11a
1.87e-86FFCP PHASE2:Mm9::chr6:113251570..113251578,+#_329b6ed7138a6c61a2ec9877f02c3792p@chr6:113251570..113251578, +
1.87e-86FFCP PHASE1:Mm9::chr15:65641741..65641748,+#_329b6ed7138a6c61a2ec9877f02c3792p@chr15:65641741..65641748, +
1.87e-86FFCP PHASE2:Mm9::chr13:76964459..76964469,+#_329b6ed7138a6c61a2ec9877f02c3792p15@Mctp1
1.87e-86FFCP PHASE1:Mm9::chr2:14685072..14685084,+#_329b6ed7138a6c61a2ec9877f02c3792p41@Cacnb2
1.87e-86FFCP PHASE1:Mm9::chr5:21371424..21371435,-#_329b6ed7138a6c61a2ec9877f02c3792p2@Slc26a5
1.87e-86FFCP PHASE1:Mm9::chr11:102123535..102123544,+#_329b6ed7138a6c61a2ec9877f02c3792p5@BC030867
1.87e-86FFCP PHASE2:Mm9::chr10:97109753..97109764,+#_329b6ed7138a6c61a2ec9877f02c3792p3@Epyc
1.87e-86FFCP PHASE2:Mm9::chr2:121206677..121206683,-#_329b6ed7138a6c61a2ec9877f02c3792p3@Strc
1.87e-86FFCP PHASE1:Mm9::chr6:30619378..30619412,-#_329b6ed7138a6c61a2ec9877f02c3792p11@Tsga14
1.87e-86FFCP PHASE2:Mm9::chr3:154459184..154459195,+#_329b6ed7138a6c61a2ec9877f02c3792p@chr3:154459184..154459195, +
1.87e-86FFCP PHASE2:Mm9::chr2:67011941..67011951,+#_329b6ed7138a6c61a2ec9877f02c3792p3@Gm1322
1.87e-86FFCP PHASE2:Mm9::chr9:42207983..42207995,-#_329b6ed7138a6c61a2ec9877f02c3792p3@Tecta
1.87e-86FFCP PHASE1:Mm9::chr5:144115382..144115389,+#_329b6ed7138a6c61a2ec9877f02c3792p@chr5:144115382..144115389, +
1.87e-86FFCP PHASE2:Mm9::chr2:73232344..73232356,-#_329b6ed7138a6c61a2ec9877f02c3792p@chr2:73232344..73232356, -
1.87e-86FFCP PHASE2:Mm9::chr1:172843885..172843890,-#_329b6ed7138a6c61a2ec9877f02c3792p@chr1:172843885..172843890, -
1.87e-86FFCP PHASE1:Mm9::chr7:139597684..139597691,+#_329b6ed7138a6c61a2ec9877f02c3792p@chr7:139597684..139597691, +
1.87e-86FFCP PHASE1:Mm9::chr19:21028739..21028785,-#_329b6ed7138a6c61a2ec9877f02c3792p1@Tmc1
1.87e-86FFCP PHASE1:Mm9::chr17:13983179..13983190,+#_329b6ed7138a6c61a2ec9877f02c3792p@chr17:13983179..13983190, +
1.87e-86FFCP PHASE2:Mm9::chr9:42207375..42207384,-#_329b6ed7138a6c61a2ec9877f02c3792p@chr9:42207375..42207384, -
1.87e-86FFCP PHASE2:Mm9::chr19:55256373..55256384,+#_329b6ed7138a6c61a2ec9877f02c3792p@chr19:55256373..55256384, +
1.87e-86FFCP PHASE1:Mm9::chr2:121206667..121206674,-#_329b6ed7138a6c61a2ec9877f02c3792p2@Strc
1.87e-86FFCP PHASE2:Mm9::chr1:60561636..60561645,-#_329b6ed7138a6c61a2ec9877f02c3792p@chr1:60561636..60561645, -
1.87e-86FFCP PHASE1:Mm9::chr15:89215333..89215341,+#_329b6ed7138a6c61a2ec9877f02c3792p@chr15:89215333..89215341, +
1.87e-86FFCP PHASE1:Mm9::chr10:81091447..81091464,+#_329b6ed7138a6c61a2ec9877f02c3792p9@Ankrd24
1.87e-86FFCP PHASE2:Mm9::chr7:133957514..133957529,+#_329b6ed7138a6c61a2ec9877f02c3792p@chr7:133957514..133957529, +
1.87e-86FFCP PHASE1:Mm9::chr1:172843813..172843834,-#_329b6ed7138a6c61a2ec9877f02c3792p@chr1:172843813..172843834, -
1.87e-86FFCP PHASE2:Mm9::chr10:107349378..107349390,-#_329b6ed7138a6c61a2ec9877f02c3792p1@Otogl
1.87e-86FFCP PHASE1:Mm9::chr5:72652660..72652667,+#_329b6ed7138a6c61a2ec9877f02c3792p@chr5:72652660..72652667, +
1.87e-86FFCP PHASE1:Mm9::chr16:93971367..93971379,-#_329b6ed7138a6c61a2ec9877f02c3792p@chr16:93971367..93971379, -
1.87e-86FFCP PHASE2:Mm9::chr17:13983198..13983203,+#_329b6ed7138a6c61a2ec9877f02c3792p@chr17:13983198..13983203, +
1.87e-86FFCP PHASE1:Mm9::chr9:42207983..42207995,-#_329b6ed7138a6c61a2ec9877f02c3792p3@Tecta
1.87e-86FFCP PHASE1:Mm9::chr7:53496326..53496340,+#_329b6ed7138a6c61a2ec9877f02c3792p1@Otog
1.87e-86FFCP PHASE2:Mm9::chr13:43699188..43699216,+#_329b6ed7138a6c61a2ec9877f02c3792p@chr13:43699188..43699216, +
1.87e-86FFCP PHASE1:Mm9::chr3:154459231..154459240,+#_329b6ed7138a6c61a2ec9877f02c3792p@chr3:154459231..154459240, +
1.87e-86FFCP PHASE2:Mm9::chr13:78322370..78322376,-#_329b6ed7138a6c61a2ec9877f02c3792p4@uc007rhb.1
1.87e-86FFCP PHASE2:Mm9::chr1:182528371..182528385,+#_329b6ed7138a6c61a2ec9877f02c3792p@chr1:182528371..182528385, +

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