Personal tools

UBERON:0003295: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{UBERON
{{UBERON
|id=UBERON:0003295
|alt_id=
|name=pharyngeal gland
|namespace=
|def="Racemose mucous glands beneath the mucous membrane of the pharynx." [Biology-Online_Dictionary:http\://www.biology-online.org/dictionary/]
|xref=BTO:0004849;;EHDAA:2967;;EHDAA2:0001461;;FMA:55075
|is_a=UBERON:0000077;;UBERON:0003408
|synonym="glandulae pharyngeae" RELATED [BTO:0004849];;"pharynx gland" EXACT [EHDAA2:0001461]
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="Racemose mucous glands beneath the mucous membrane of the pharynx." [Biology-Online_Dictionary:http://www.biology-online.org/dictionary/]
|subset=organ_slim
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0003295
|is_a=UBERON:0003408 ;;UBERON:0004119
|is_obsolete=
|located_in=
|located_in=
|name=pharyngeal gland
|namespace=FANTOM
|obo_creation_date=
|part_of=UBERON:0001042
|part_of=UBERON:0001042
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|subset=organ_slim
|preceded_by=
|synonym="glandulae pharyngeae" RELATED [BTO:0004849];;"pharynx gland" EXACT [EHDAA2:0001461]
|union_of=
|xref=BTO:0004849;;EHDAA2:0001461;;EHDAA:2967;;FMA:55075
}}
}}

Latest revision as of 17:39, 12 September 2014

Name:pharyngeal gland
Namespace:FANTOM
Definition:"Racemose mucous glands beneath the mucous membrane of the pharynx." [Biology-Online_Dictionary:http://www.biology-online.org/dictionary/]
Xrefs:
links:

BTO:0004849
EHDAA2:0001461
EHDAA:2967

FMA:55075
Synonyms: "glandulae pharyngeae" RELATED [BTO:0004849]
"pharynx gland" EXACT [EHDAA2:0001461]
Subset: organ_slim

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0003408(gland of gut),UBERON:0004119(endoderm-derived structure)
part_of:UBERON:0001042(chordate pharynx)



Children

part of:UBERON:0005562 (thymus primordium)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology



Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0003295 (pharyngeal gland), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
6.94e-147FFCP PHASE2:Hg19::chr14:22928012..22928031,+#_c59c096e62046ae3e6a537ce63f31d2cp3@uc001wea.3, p3@uc010ajt.2, p3@uc010aju.1
6.94e-147FFCP PHASE1:Hg19::chr14:22928012..22928031,+#_c59c096e62046ae3e6a537ce63f31d2cp3@uc001wea.3, p3@uc010ajt.2, p3@uc010aju.1
8.91e-111FFCP PHASE1:Hg19::chr14:22927984..22927999,+#_7b94c44a92245c36309629b11932f72fp4@uc001wea.3, p4@uc010ajt.2, p4@uc010aju.1
8.91e-111FFCP PHASE2:Hg19::chr14:22927984..22927999,+#_7b94c44a92245c36309629b11932f72fp4@uc001wea.3, p4@uc010ajt.2, p4@uc010aju.1
1.55e-98FFCP PHASE1:Hg19::chr2:87018900..87018905,+#_ca411ecdebe0e4ea3c2b8ece49a92c9ep@chr2:87018900..87018905, +
1.55e-98FFCP PHASE1:Hg19::chr15:58069758..58069762,+#_ca411ecdebe0e4ea3c2b8ece49a92c9ep@chr15:58069758..58069762, +
1.55e-98FFCP PHASE1:Hg19::chr11:36622593..36622605,+#_ca411ecdebe0e4ea3c2b8ece49a92c9ep@chr11:36622593..36622605, +
1.55e-98FFCP PHASE1:Hg19::chr12:123636839..123636885,-#_ca411ecdebe0e4ea3c2b8ece49a92c9ep@chr12:123636839..123636885, -
1.55e-98FFCP PHASE1:Hg19::chr1:158259849..158259854,+#_ca411ecdebe0e4ea3c2b8ece49a92c9ep11@CD1C
1.55e-98FFCP PHASE1:Hg19::chr1:200500161..200500173,-#_ca411ecdebe0e4ea3c2b8ece49a92c9ep@chr1:200500161..200500173, -
1.55e-98FFCP PHASE1:Hg19::chr1:204494413..204494420,+#_ca411ecdebe0e4ea3c2b8ece49a92c9ep17@MDM4
1.55e-98FFCP PHASE1:Hg19::chr11:6953654..6953661,+#_ca411ecdebe0e4ea3c2b8ece49a92c9ep5@ZNF215
1.55e-98FFCP PHASE1:Hg19::chr2:227771357..227771363,+#_ca411ecdebe0e4ea3c2b8ece49a92c9ep10@RHBDD1
1.55e-98FFCP PHASE1:Hg19::chr10:11486829..11486836,+#_ca411ecdebe0e4ea3c2b8ece49a92c9ep@chr10:11486829..11486836, +
1.55e-98FFCP PHASE1:Hg19::chr2:233184654..233184661,-#_ca411ecdebe0e4ea3c2b8ece49a92c9ep@chr2:233184654..233184661, -
1.55e-98FFCP PHASE1:Hg19::chr10:11486877..11486886,+#_ca411ecdebe0e4ea3c2b8ece49a92c9ep@chr10:11486877..11486886, +
1.55e-98FFCP PHASE1:Hg19::chr10:115022988..115023001,+#_ca411ecdebe0e4ea3c2b8ece49a92c9ep@chr10:115022988..115023001, +
1.55e-98FFCP PHASE1:Hg19::chr10:115023005..115023015,+#_ca411ecdebe0e4ea3c2b8ece49a92c9ep@chr10:115023005..115023015, +
1.55e-98FFCP PHASE1:Hg19::chr15:60131355..60131365,-#_ca411ecdebe0e4ea3c2b8ece49a92c9ep@chr15:60131355..60131365, -
1.55e-98FFCP PHASE1:Hg19::chr16:74359040..74359071,+#_ca411ecdebe0e4ea3c2b8ece49a92c9ep@chr16:74359040..74359071, +
1.55e-98FFCP PHASE1:Hg19::chr10:115023055..115023072,+#_ca411ecdebe0e4ea3c2b8ece49a92c9ep@chr10:115023055..115023072, +
1.55e-98FFCP PHASE1:Hg19::chr10:115023094..115023106,+#_ca411ecdebe0e4ea3c2b8ece49a92c9ep@chr10:115023094..115023106, +
1.55e-98FFCP PHASE1:Hg19::chr17:76274572..76274581,-#_ca411ecdebe0e4ea3c2b8ece49a92c9ep4@ENST00000374945
1.55e-98FFCP PHASE1:Hg19::chr12:48227243..48227269,+#_ca411ecdebe0e4ea3c2b8ece49a92c9ep@chr12:48227243..48227269, +
1.55e-98FFCP PHASE1:Hg19::chr3:155273127..155273136,-#_ca411ecdebe0e4ea3c2b8ece49a92c9ep4@AK093601
1.55e-98FFCP PHASE1:Hg19::chr12:123634449..123634460,-#_ca411ecdebe0e4ea3c2b8ece49a92c9ep25@PITPNM2
1.55e-98FFCP PHASE1:Hg19::chr2:87018380..87018390,-#_ca411ecdebe0e4ea3c2b8ece49a92c9ep6@CD8A
1.55e-98FFCP PHASE1:Hg19::chr3:34517538..34517551,+#_ca411ecdebe0e4ea3c2b8ece49a92c9ep@chr3:34517538..34517551, +
1.55e-98FFCP PHASE1:Hg19::chr11:36589389..36589398,-#_ca411ecdebe0e4ea3c2b8ece49a92c9ep@chr11:36589389..36589398, -
1.55e-98FFCP PHASE1:Hg19::chr17:80866179..80866188,+#_ca411ecdebe0e4ea3c2b8ece49a92c9ep@chr17:80866179..80866188, +
1.55e-98FFCP PHASE1:Hg19::chr1:204507243..204507252,+#_ca411ecdebe0e4ea3c2b8ece49a92c9ep19@MDM4
1.55e-98FFCP PHASE1:Hg19::chr15:56940722..56940731,+#_ca411ecdebe0e4ea3c2b8ece49a92c9ep@chr15:56940722..56940731, +
1.55e-98FFCP PHASE1:Hg19::chr15:58069384..58069408,+#_ca411ecdebe0e4ea3c2b8ece49a92c9ep@chr15:58069384..58069408, +
1.55e-98FFCP PHASE1:Hg19::chr1:158226030..158226041,+#_ca411ecdebe0e4ea3c2b8ece49a92c9ep@chr1:158226030..158226041, +
1.55e-98FFCP PHASE1:Hg19::chr3:35683004..35683015,+#_ca411ecdebe0e4ea3c2b8ece49a92c9ep42@ARPP21
1.55e-98FFCP PHASE1:Hg19::chr1:204494427..204494436,+#_ca411ecdebe0e4ea3c2b8ece49a92c9ep15@MDM4
1.55e-98FFCP PHASE1:Hg19::chr1:2084380..2084413,-#_ca411ecdebe0e4ea3c2b8ece49a92c9ep@chr1:2084380..2084413, -
1.55e-98FFCP PHASE1:Hg19::chr1:158170478..158170491,-#_ca411ecdebe0e4ea3c2b8ece49a92c9ep@chr1:158170478..158170491, -
1.55e-98FFCP PHASE1:Hg19::chr12:133414662..133414671,-#_ca411ecdebe0e4ea3c2b8ece49a92c9ep@chr12:133414662..133414671, -
1.55e-98FFCP PHASE1:Hg19::chr20:58830826..58830835,+#_ca411ecdebe0e4ea3c2b8ece49a92c9ep@chr20:58830826..58830835, +
1.55e-98FFCP PHASE1:Hg19::chr2:233102726..233102734,+#_ca411ecdebe0e4ea3c2b8ece49a92c9ep@chr2:233102726..233102734, +
1.55e-98FFCP PHASE1:Hg19::chr15:57017749..57017755,-#_ca411ecdebe0e4ea3c2b8ece49a92c9ep@chr15:57017749..57017755, -
1.55e-98FFCP PHASE1:Hg19::chr1:44035233..44035242,+#_ca411ecdebe0e4ea3c2b8ece49a92c9ep@chr1:44035233..44035242, +
1.55e-98FFCP PHASE1:Hg19::chr10:26726728..26726731,+#_ca411ecdebe0e4ea3c2b8ece49a92c9ep17@APBB1IP
1.55e-98FFCP PHASE1:Hg19::chr20:30272266..30272271,-#_ca411ecdebe0e4ea3c2b8ece49a92c9ep@chr20:30272266..30272271, -
1.55e-98FFCP PHASE1:Hg19::chr20:58830799..58830808,+#_ca411ecdebe0e4ea3c2b8ece49a92c9ep@chr20:58830799..58830808, +
1.55e-98FFCP PHASE1:Hg19::chr18:13437980..13437986,+#_ca411ecdebe0e4ea3c2b8ece49a92c9ep@chr18:13437980..13437986, +
1.55e-98FFCP PHASE1:Hg19::chr12:47205180..47205187,+#_ca411ecdebe0e4ea3c2b8ece49a92c9ep@chr12:47205180..47205187, +
1.55e-98FFCP PHASE1:Hg19::chr2:87017428..87017437,+#_ca411ecdebe0e4ea3c2b8ece49a92c9ep@chr2:87017428..87017437, +
1.55e-98FFCP PHASE1:Hg19::chr2:57846504..57846542,+#_ca411ecdebe0e4ea3c2b8ece49a92c9ep@chr2:57846504..57846542, +
1.55e-98FFCP PHASE1:Hg19::chr12:123607146..123607168,-#_ca411ecdebe0e4ea3c2b8ece49a92c9ep@chr12:123607146..123607168, -
1.55e-98FFCP PHASE1:Hg19::chr1:199026759..199026762,+#_ca411ecdebe0e4ea3c2b8ece49a92c9ep@chr1:199026759..199026762, +
1.55e-98FFCP PHASE1:Hg19::chr1:158332631..158332640,+#_ca411ecdebe0e4ea3c2b8ece49a92c9ep@chr1:158332631..158332640, +
1.55e-98FFCP PHASE1:Hg19::chr13:99628369..99628374,-#_ca411ecdebe0e4ea3c2b8ece49a92c9ep@chr13:99628369..99628374, -
1.55e-98FFCP PHASE1:Hg19::chr3:34517741..34517784,+#_ca411ecdebe0e4ea3c2b8ece49a92c9ep@chr3:34517741..34517784, +
1.55e-98FFCP PHASE1:Hg19::chr12:123559773..123559784,-#_ca411ecdebe0e4ea3c2b8ece49a92c9ep@chr12:123559773..123559784, -
1.55e-98FFCP PHASE1:Hg19::chr1:158260453..158260459,-#_ca411ecdebe0e4ea3c2b8ece49a92c9ep@chr1:158260453..158260459, -
1.55e-98FFCP PHASE1:Hg19::chr15:60131313..60131324,-#_ca411ecdebe0e4ea3c2b8ece49a92c9ep@chr15:60131313..60131324, -
1.55e-98FFCP PHASE1:Hg19::chr12:123559708..123559720,-#_ca411ecdebe0e4ea3c2b8ece49a92c9ep@chr12:123559708..123559720, -
1.55e-98FFCP PHASE1:Hg19::chr15:99071828..99071840,+#_ca411ecdebe0e4ea3c2b8ece49a92c9ep@chr15:99071828..99071840, +
1.55e-98FFCP PHASE1:Hg19::chr1:160643269..160643276,+#_ca411ecdebe0e4ea3c2b8ece49a92c9ep5@ENST00000443928
1.55e-98FFCP PHASE1:Hg19::chr12:59432175..59432191,+#_ca411ecdebe0e4ea3c2b8ece49a92c9ep@chr12:59432175..59432191, +
1.55e-98FFCP PHASE1:Hg19::chr1:158260649..158260652,+#_ca411ecdebe0e4ea3c2b8ece49a92c9ep13@CD1C
1.55e-98FFCP PHASE1:Hg19::chr15:60131337..60131352,-#_ca411ecdebe0e4ea3c2b8ece49a92c9ep@chr15:60131337..60131352, -
1.55e-98FFCP PHASE1:Hg19::chr14:98229095..98229108,-#_ca411ecdebe0e4ea3c2b8ece49a92c9ep1@ENST00000555187
1.55e-98FFCP PHASE1:Hg19::chr15:56940732..56940741,+#_ca411ecdebe0e4ea3c2b8ece49a92c9ep@chr15:56940732..56940741, +
1.55e-98FFCP PHASE1:Hg19::chr14:22942319..22942322,+#_ca411ecdebe0e4ea3c2b8ece49a92c9ep4@uc001wec.2
1.55e-98FFCP PHASE1:Hg19::chr3:19007717..19007728,+#_ca411ecdebe0e4ea3c2b8ece49a92c9ep@chr3:19007717..19007728, +
1.55e-98FFCP PHASE1:Hg19::chr13:99628347..99628352,-#_ca411ecdebe0e4ea3c2b8ece49a92c9ep@chr13:99628347..99628352, -
1.55e-98FFCP PHASE1:Hg19::chr2:57926329..57926337,-#_ca411ecdebe0e4ea3c2b8ece49a92c9ep@chr2:57926329..57926337, -
1.55e-98FFCP PHASE1:Hg19::chr3:35682974..35682982,+#_ca411ecdebe0e4ea3c2b8ece49a92c9ep45@ARPP21
1.55e-98FFCP PHASE1:Hg19::chr1:44035057..44035068,+#_ca411ecdebe0e4ea3c2b8ece49a92c9ep@chr1:44035057..44035068, +
1.55e-98FFCP PHASE1:Hg19::chr2:242080265..242080277,-#_ca411ecdebe0e4ea3c2b8ece49a92c9ep20@PASK
1.55e-98FFCP PHASE1:Hg19::chr17:4090402..4090406,-#_ca411ecdebe0e4ea3c2b8ece49a92c9ep@chr17:4090402..4090406, -
1.55e-98FFCP PHASE1:Hg19::chr15:58920068..58920073,-#_ca411ecdebe0e4ea3c2b8ece49a92c9ep@chr15:58920068..58920073, -
1.55e-98FFCP PHASE1:Hg19::chr2:227771044..227771054,+#_ca411ecdebe0e4ea3c2b8ece49a92c9ep9@RHBDD1
1.55e-98FFCP PHASE1:Hg19::chr12:123560793..123560802,+#_ca411ecdebe0e4ea3c2b8ece49a92c9ep@chr12:123560793..123560802, +
1.55e-98FFCP PHASE1:Hg19::chr13:99628323..99628332,-#_ca411ecdebe0e4ea3c2b8ece49a92c9ep@chr13:99628323..99628332, -
1.55e-98FFCP PHASE1:Hg19::chr12:123560608..123560615,-#_ca411ecdebe0e4ea3c2b8ece49a92c9ep24@PITPNM2
1.55e-98FFCP PHASE1:Hg19::chr12:133413547..133413557,-#_ca411ecdebe0e4ea3c2b8ece49a92c9ep13@POLE
1.55e-98FFCP PHASE1:Hg19::chr1:55776022..55776029,-#_ca411ecdebe0e4ea3c2b8ece49a92c9ep@chr1:55776022..55776029, -
1.55e-98FFCP PHASE1:Hg19::chr12:123627753..123627760,+#_ca411ecdebe0e4ea3c2b8ece49a92c9ep@chr12:123627753..123627760, +
1.55e-98FFCP PHASE1:Hg19::chr17:76274646..76274658,-#_ca411ecdebe0e4ea3c2b8ece49a92c9ep2@ENST00000374945
1.55e-98FFCP PHASE1:Hg19::chr2:162762361..162762364,+#_ca411ecdebe0e4ea3c2b8ece49a92c9ep@chr2:162762361..162762364, +
1.55e-98FFCP PHASE1:Hg19::chr20:58830811..58830825,+#_ca411ecdebe0e4ea3c2b8ece49a92c9ep@chr20:58830811..58830825, +
1.55e-98FFCP PHASE1:Hg19::chr15:58069582..58069594,+#_ca411ecdebe0e4ea3c2b8ece49a92c9ep@chr15:58069582..58069594, +
1.55e-98FFCP PHASE1:Hg19::chr10:72542272..72542281,-#_ca411ecdebe0e4ea3c2b8ece49a92c9ep6@C10orf27
1.55e-98FFCP PHASE1:Hg19::chr1:158301280..158301298,+#_ca411ecdebe0e4ea3c2b8ece49a92c9ep@chr1:158301280..158301298, +
1.55e-98FFCP PHASE1:Hg19::chr20:58833004..58833011,+#_ca411ecdebe0e4ea3c2b8ece49a92c9ep@chr20:58833004..58833011, +
1.55e-98FFCP PHASE1:Hg19::chr13:99628388..99628399,-#_ca411ecdebe0e4ea3c2b8ece49a92c9ep@chr13:99628388..99628399, -
1.55e-98FFCP PHASE1:Hg19::chr16:49633750..49633778,-#_ca411ecdebe0e4ea3c2b8ece49a92c9ep@chr16:49633750..49633778, -
1.55e-98FFCP PHASE1:Hg19::chr12:48225126..48225164,+#_ca411ecdebe0e4ea3c2b8ece49a92c9ep1@ENST00000548564, p1@ENST00000550720, p1@ENST00000550909
1.55e-98FFCP PHASE1:Hg19::chr1:194245598..194245600,-#_ca411ecdebe0e4ea3c2b8ece49a92c9ep@chr1:194245598..194245600, -
1.55e-98FFCP PHASE1:Hg19::chr1:160643289..160643296,+#_ca411ecdebe0e4ea3c2b8ece49a92c9ep4@ENST00000443928
1.55e-98FFCP PHASE1:Hg19::chr15:58069597..58069604,+#_ca411ecdebe0e4ea3c2b8ece49a92c9ep@chr15:58069597..58069604, +
1.55e-98FFCP PHASE1:Hg19::chr1:158303678..158303720,-#_ca411ecdebe0e4ea3c2b8ece49a92c9ep@chr1:158303678..158303720, -
1.55e-98FFCP PHASE1:Hg19::chr1:55776031..55776038,-#_ca411ecdebe0e4ea3c2b8ece49a92c9ep@chr1:55776031..55776038, -
1.55e-98FFCP PHASE1:Hg19::chr19:28877072..28877084,-#_ca411ecdebe0e4ea3c2b8ece49a92c9ep@chr19:28877072..28877084, -
1.55e-98FFCP PHASE1:Hg19::chr1:32314477..32314482,+#_ca411ecdebe0e4ea3c2b8ece49a92c9ep@chr1:32314477..32314482, +
1.55e-98FFCP PHASE1:Hg19::chr11:8954087..8954092,-#_ca411ecdebe0e4ea3c2b8ece49a92c9ep1@AB527792

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=UBERON:0003295&oldid=3277541"