UBERON:0003513: Difference between revisions
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|located_in= | |located_in= | ||
|name=trunk blood vessel | |name=trunk blood vessel | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of=UBERON:0002100 | |part_of=UBERON:0002100 | ||
Latest revision as of 17:40, 12 September 2014
| Name: | trunk blood vessel | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "A blood vessel that is part of a trunk [Obol]." [OBOL:automatic] | ||
| Xrefs: |
| ||
| Synonyms: |
"blood vessel of torso" EXACT [OBOL:automatic] "blood vessel of trunk" EXACT [OBOL:automatic] "torso blood vessel" EXACT [OBOL:automatic] |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0001981(blood vessel) |
|---|---|
| part_of: | UBERON:0002100(trunk) |
Children
| is a: | UBERON:0003834 (thoracic segment blood vessel),UBERON:0003835 (abdominal segment blood vessel),UBERON:0005622 (right dorsal aorta),UBERON:0005805 (dorsal aorta) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 11287-116I9 (Smooth Muscle Cells - Internal Thoracic Artery, donor1)
- 11289-117A2 (Smooth Muscle Cells - Subclavian Artery, donor1)
- 11364-117I5 (Smooth Muscle Cells - Internal Thoracic Artery, donor2)
- 11366-117I7 (Smooth Muscle Cells - Subclavian Artery, donor2)
- 11436-118H5 (Smooth Muscle Cells - Internal Thoracic Artery, donor3)
- 11438-118H7 (Smooth Muscle Cells - Subclavian Artery, donor3)
- 11521-119H9 (Hepatic Sinusoidal Endothelial Cells, donor1)
- 11601-120H8 (Hepatic Sinusoidal Endothelial Cells, donor2)
- 11682-122H8 (Hepatic Sinusoidal Endothelial Cells, donor3)
- 11830-124G3 (Mouse hepatic Sinusoidal Endothelial Cells, donor1)
... further results Mouse (Mus musculus)
- 11287-116I9 (Smooth Muscle Cells - Internal Thoracic Artery, donor1)
- 11289-117A2 (Smooth Muscle Cells - Subclavian Artery, donor1)
- 11364-117I5 (Smooth Muscle Cells - Internal Thoracic Artery, donor2)
- 11366-117I7 (Smooth Muscle Cells - Subclavian Artery, donor2)
- 11436-118H5 (Smooth Muscle Cells - Internal Thoracic Artery, donor3)
- 11438-118H7 (Smooth Muscle Cells - Subclavian Artery, donor3)
- 11521-119H9 (Hepatic Sinusoidal Endothelial Cells, donor1)
- 11601-120H8 (Hepatic Sinusoidal Endothelial Cells, donor2)
- 11682-122H8 (Hepatic Sinusoidal Endothelial Cells, donor3)
- 11830-124G3 (Mouse hepatic Sinusoidal Endothelial Cells, donor1)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0003513 (trunk blood vessel), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 3.07e-86 | FFCP PHASE1:Mm9::chr9:116223548..116223551,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr9:116223548..116223551, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr8:114250006..114250039,-#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr8:114250006..114250039, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr4:57687477..57687488,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr4:57687477..57687488, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr3:104857794..104857802,-#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr3:104857794..104857802, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr5:33088768..33088773,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr5:33088768..33088773, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr6:48398664..48398684,-#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr6:48398664..48398684, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr1:163794592..163794593,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr1:163794592..163794593, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr3:90270007..90270012,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr3:90270007..90270012, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr7:117101788..117101793,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr7:117101788..117101793, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr16:85547242..85547252,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr16:85547242..85547252, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr2:169549462..169549477,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr2:169549462..169549477, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr4:43407825..43407830,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr4:43407825..43407830, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr17:35093616..35093631,-#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr17:35093616..35093631, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr18:4336287..4336296,-#_4496c44f15d11b0db3cb2e6f67e2a000 | p8@Map3k8 |
| 3.07e-86 | FFCP PHASE1:Mm9::chr1:138241693..138241697,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr1:138241693..138241697, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr10:93895817..93895819,-#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr10:93895817..93895819, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr18:47491114..47491123,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr18:47491114..47491123, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr17:35106749..35106752,-#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr17:35106749..35106752, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr1:186559285..186559288,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr1:186559285..186559288, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr11:109223779..109223789,-#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr11:109223779..109223789, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr6:34549876..34549892,-#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr6:34549876..34549892, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr10:93819538..93819549,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr10:93819538..93819549, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr10:85587155..85587188,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr10:85587155..85587188, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr17:34798597..34798606,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr17:34798597..34798606, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr12:25364645..25364655,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr12:25364645..25364655, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr18:38831400..38831402,-#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr18:38831400..38831402, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr13:5840965..5840966,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr13:5840965..5840966, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr13:113554186..113554192,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr13:113554186..113554192, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr11:117829935..117829959,-#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr11:117829935..117829959, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr5:32912678..32912687,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr5:32912678..32912687, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr4:100890388..100890423,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr4:100890388..100890423, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr9:42915185..42915192,-#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr9:42915185..42915192, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr8:111108947..111108951,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr8:111108947..111108951, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr19:29573929..29573932,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr19:29573929..29573932, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr8:111108947..111108951,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr8:111108947..111108951, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr11:107196799..107196814,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr11:107196799..107196814, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr12:87046930..87046933,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr12:87046930..87046933, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr2:129407463..129407468,-#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr2:129407463..129407468, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr5:76329688..76329692,-#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr5:76329688..76329692, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr12:100752983..100752984,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr12:100752983..100752984, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr16:30944451..30944485,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr16:30944451..30944485, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr15:82209805..82209851,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr15:82209805..82209851, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr13:113554186..113554192,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr13:113554186..113554192, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr1:132405466..132405470,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr1:132405466..132405470, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr8:89310639..89310641,-#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr8:89310639..89310641, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr13:5840965..5840966,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr13:5840965..5840966, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr11:48685851..48685860,-#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr11:48685851..48685860, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr15:97402708..97402712,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr15:97402708..97402712, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr11:115280630..115280662,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr11:115280630..115280662, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr6:92938260..92938264,-#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr6:92938260..92938264, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr18:65159026..65159034,-#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr18:65159026..65159034, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr9:62199266..62199267,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr9:62199266..62199267, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr16:11009028..11009039,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p4@Gm4262 |
| 3.07e-86 | FFCP PHASE2:Mm9::chr6:51831254..51831256,-#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr6:51831254..51831256, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr11:118287827..118287833,-#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr11:118287827..118287833, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr4:86335502..86335509,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr4:86335502..86335509, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr3:121593688..121593695,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr3:121593688..121593695, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr10:8471698..8471701,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr10:8471698..8471701, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr2:84756280..84756286,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr2:84756280..84756286, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr7:52781901..52781904,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr7:52781901..52781904, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr17:28107053..28107062,-#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr17:28107053..28107062, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr9:45920408..45920437,-#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr9:45920408..45920437, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr2:133323630..133323631,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr2:133323630..133323631, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr1:173044327..173044331,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr1:173044327..173044331, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr14:8928284..8928331,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr14:8928284..8928331, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr17:34798555..34798562,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr17:34798555..34798562, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr4:137487112..137487117,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr4:137487112..137487117, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr18:44793802..44793835,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr18:44793802..44793835, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr18:38831400..38831402,-#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr18:38831400..38831402, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr11:68437375..68437378,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr11:68437375..68437378, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr16:85801525..85801529,-#_4496c44f15d11b0db3cb2e6f67e2a000 | p6@Adamts1 |
| 3.07e-86 | FFCP PHASE2:Mm9::chr13:113542610..113542614,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr13:113542610..113542614, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr4:86335502..86335509,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr4:86335502..86335509, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr14:8928284..8928331,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr14:8928284..8928331, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr12:86691503..86691504,-#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr12:86691503..86691504, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr17:35093764..35093773,-#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr17:35093764..35093773, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr17:12388232..12388237,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr17:12388232..12388237, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr12:81955014..81955018,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr12:81955014..81955018, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr10:85585991..85586025,-#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr10:85585991..85586025, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr10:93942324..93942342,-#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr10:93942324..93942342, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr12:85288471..85288502,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr12:85288471..85288502, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr13:113542610..113542614,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr13:113542610..113542614, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr15:32178407..32178408,-#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr15:32178407..32178408, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr17:24807620..24807650,-#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr17:24807620..24807650, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr11:117737077..117737096,-#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr11:117737077..117737096, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr10:93895817..93895819,-#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr10:93895817..93895819, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr14:15179132..15179141,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p8@Il3ra |
| 3.07e-86 | FFCP PHASE2:Mm9::chr10:8471698..8471701,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr10:8471698..8471701, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr8:86713876..86713879,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr8:86713876..86713879, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr16:28911901..28911906,-#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr16:28911901..28911906, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr17:35093377..35093381,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr17:35093377..35093381, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr5:114422970..114422985,-#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr5:114422970..114422985, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr4:57687477..57687488,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr4:57687477..57687488, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr5:33088768..33088773,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr5:33088768..33088773, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr13:96429295..96429302,-#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr13:96429295..96429302, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr12:25364645..25364655,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr12:25364645..25364655, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr18:44793802..44793835,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr18:44793802..44793835, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr18:35900327..35900366,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr18:35900327..35900366, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr9:42915220..42915225,-#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr9:42915220..42915225, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr8:11183699..11183703,-#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr8:11183699..11183703, - |
