UBERON:0003947: Difference between revisions
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{{UBERON | {{UBERON | ||
| | |alt_id= | ||
|comment=TODO - check relationship between CP and BV. If this is part of then this class should be obsoleted | |comment=TODO - check relationship between CP and BV. If this is part of then this class should be obsoleted | ||
|created_by= | |created_by= | ||
| | |def="the brain ventricles or their associated choroid plexuses" [MP:0002200] | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|disjoint_from= | |||
|has_quality= | |has_quality= | ||
|id=UBERON:0003947 | |||
|is_a=UBERON:0004121 ;;UBERON:0010000 | |||
|is_obsolete= | |||
|located_in= | |located_in= | ||
|part_of= | |name=brain ventricle/choroid plexus | ||
|namespace=FANTOM | |||
|obo_creation_date= | |||
|part_of=UBERON:0000955 | |||
|preceded_by= | |||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
| | |subset= | ||
| | |synonym= | ||
|union_of=UBERON:0001886;;UBERON:0004086 | |||
|xref= | |||
}} | }} | ||
Latest revision as of 17:42, 12 September 2014
| Name: | brain ventricle/choroid plexus |
|---|---|
| Namespace: | FANTOM |
| Definition: | "the brain ventricles or their associated choroid plexuses" [MP:0002200] |
| Comments: | TODO - check relationship between CP and BV. If this is part of then this class should be obsoleted |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0004121(ectoderm-derived structure),UBERON:0010000(multicellular anatomical structure) |
|---|---|
| union_of: | UBERON:0001886(choroid plexus),UBERON:0004086(brain ventricle) |
| part_of: | UBERON:0000955(brain) |
Children
| is a: | UBERON:0001886 (choroid plexus),UBERON:0004086 (brain ventricle) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0003947 (brain ventricle/choroid plexus), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
No analysis results
