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{{UBERON
{{UBERON
|id=UBERON:0004122
|alt_id=
|name=genitourinary system
|namespace=
|def=
|xref=AAO:0000624;;BILA:0000122;;BTO:0003091;;EFO:0003864;;EHDAA:1013;;EMAPA:16367;;EV:0100094;;GAID:362;;galen:GenitoUrinarySystem;;MESH:A.05;;ncithesaurus:Genitourinary_System;;OpenCyc:Mx4rQRpVMgAKEdyHxgDggVfs8g;;SCTID:278861008;;VHOG:0000286;;XAO:0000140
|is_a=UBERON:0000467;;UBERON:0004120
|synonym="genitourinary tract" RELATED [];;"GU tract" RELATED [];;"urogenital system" EXACT [];;"urogenital tract" RELATED [BTO:0003091];;"Urogenitalsystem" RELATED [BTO:0003091]
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def=
|subset=
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=UBERON:0003064
|develops_from=UBERON:0003064
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0004122
|is_a=UBERON:0000467 ;;UBERON:0004120
|is_obsolete=
|located_in=
|located_in=
|name=genitourinary system
|namespace=FANTOM
|obo_creation_date=
|part_of=
|part_of=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|preceded_by=
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl;;UBPROP:0000001 "Anatomical system that has as its parts the organs concerned with the production and excretion of urine and those concerned with reproduction.[AAO]" xsd:string;;UBPROP:0000002 "relationship type change: differentiates_from intermediate mesoderm (AAO:0010575) CHANGED TO: develops_from intermediate mesoderm (UBERON:0003064)[AAO]" xsd:string
|subset=
|synonym="genitourinary tract" RELATED [];;"GU tract" RELATED [];;"urogenital system" EXACT [];;"urogenital tract" RELATED [BTO:0003091];;"Urogenitalsystem" RELATED [BTO:0003091]
|union_of=
|xref=AAO:0000624;;BILA:0000122;;BTO:0003091;;EFO:0003864;;EHDAA:1013;;EMAPA:16367;;EV:0100094;;GAID:362;;galen:GenitoUrinarySystem;;MESH:A.05;;ncithesaurus:Genitourinary_System;;OpenCyc:Mx4rQRpVMgAKEdyHxgDggVfs8g;;SCTID:278861008;;VHOG:0000286;;XAO:0000140
}}
}}

Latest revision as of 17:43, 12 September 2014

Name:genitourinary system
Namespace:FANTOM
Xrefs:
links:

AAO:0000624
BILA:0000122
BTO:0003091
EFO:0003864
EHDAA:1013
EMAPA:16367
EV:0100094
GAID:362
galen:GenitoUrinarySystem
MESH:A.05
ncithesaurus:Genitourinary_System
OpenCyc:Mx4rQRpVMgAKEdyHxgDggVfs8g
SCTID:278861008
VHOG:0000286

XAO:0000140
Synonyms: "genitourinary tract" RELATED []
"GU tract" RELATED []
"urogenital system" EXACT []
"urogenital tract" RELATED [BTO:0003091]
"Urogenitalsystem" RELATED [BTO:0003091]

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0000467(anatomical system),UBERON:0004120(mesoderm-derived structure)
develops_from:UBERON:0003064(intermediate mesoderm)



Children

part of:UBERON:0000162 (cloaca),UBERON:0005294 (genital ridge)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology



Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004122 (genitourinary system), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
2.45e-30FFCP PHASE2:Hg19::chr10:91567075..91567084,+#_9b30401d1cd989136c28849a6c93f47cp@chr10:91567075..91567084, +
2.45e-30FFCP PHASE1:Hg19::chr10:91567075..91567084,+#_9b30401d1cd989136c28849a6c93f47cp@chr10:91567075..91567084, +
2.45e-30FFCP PHASE2:Hg19::chr10:91567053..91567066,+#_9b30401d1cd989136c28849a6c93f47cp@chr10:91567053..91567066, +
2.45e-30FFCP PHASE1:Hg19::chr10:91567053..91567066,+#_9b30401d1cd989136c28849a6c93f47cp@chr10:91567053..91567066, +
3.0e-28FFCP PHASE1:Mm9::chr7:135148666..135148682,-#_6a5c5d5ab3ce189d95688753a00e3483p1@ENSMUST00000126205
3.0e-28FFCP PHASE2:Mm9::chr7:135148666..135148682,-#_6a5c5d5ab3ce189d95688753a00e3483p1@ENSMUST00000126205
1.82e-27FFCP PHASE2:Hg19::chr7:89874193..89874199,+#_d7b13bda033d06844b8e039d2280c4c2p7@C7orf63
1.82e-27FFCP PHASE1:Hg19::chr7:89874193..89874199,+#_d7b13bda033d06844b8e039d2280c4c2p7@C7orf63
7.67e-27FFCP PHASE2:Mm9::chr1:132699659..132699668,+#_c2fabb3dc45d2cc2cee48207436882aep@chr1:132699659..132699668, +
7.67e-27FFCP PHASE1:Mm9::chr1:132699659..132699668,+#_c2fabb3dc45d2cc2cee48207436882aep@chr1:132699659..132699668, +
1.15e-26FFCP PHASE1:Hg19::chr14:33088589..33088594,+#_34d68d2bde1ea1b4d7fc98247ea96527p@chr14:33088589..33088594, +
1.15e-26FFCP PHASE2:Hg19::chr14:33088589..33088594,+#_34d68d2bde1ea1b4d7fc98247ea96527p@chr14:33088589..33088594, +
1.93e-24FFCP PHASE2:Hg19::chr10:97262585..97262611,-#_cb3407884a55077739581ab0016af10ep@chr10:97262585..97262611, -
1.93e-24FFCP PHASE1:Hg19::chr10:97262585..97262611,-#_cb3407884a55077739581ab0016af10ep@chr10:97262585..97262611, -
2.98e-24FFCP PHASE2:Mm9::chr9:96425983..96425992,+#_b3d15bb34f90207850127ccd2986b878p@chr9:96425983..96425992, +
2.98e-24FFCP PHASE2:Mm9::chr7:114836650..114836663,+#_b3d15bb34f90207850127ccd2986b878p@chr7:114836650..114836663, +
2.98e-24FFCP PHASE2:Mm9::chr15:58237385..58237400,+#_b3d15bb34f90207850127ccd2986b878p@chr15:58237385..58237400, +
2.98e-24FFCP PHASE1:Mm9::chr9:96425825..96425834,-#_b3d15bb34f90207850127ccd2986b878p@chr9:96425825..96425834, -
2.98e-24FFCP PHASE1:Mm9::chr9:96425983..96425992,+#_b3d15bb34f90207850127ccd2986b878p@chr9:96425983..96425992, +
2.98e-24FFCP PHASE1:Mm9::chr7:114836650..114836663,+#_b3d15bb34f90207850127ccd2986b878p@chr7:114836650..114836663, +
2.98e-24FFCP PHASE2:Mm9::chr9:96425825..96425834,-#_b3d15bb34f90207850127ccd2986b878p@chr9:96425825..96425834, -
2.98e-24FFCP PHASE1:Mm9::chr15:58237385..58237400,+#_b3d15bb34f90207850127ccd2986b878p@chr15:58237385..58237400, +
3.9e-24FFCP PHASE2:Mm9::chr7:28922549..28922561,+#_f55f7345503823b90ee6bccf8e901b95p@chr7:28922549..28922561, +
3.9e-24FFCP PHASE1:Mm9::chr7:55028037..55028075,+#_f55f7345503823b90ee6bccf8e901b95p@chr7:55028037..55028075, +
3.9e-24FFCP PHASE1:Mm9::chr9:36337031..36337049,-#_f55f7345503823b90ee6bccf8e901b95p@chr9:36337031..36337049, -
3.9e-24FFCP PHASE1:Mm9::chr7:28922549..28922561,+#_f55f7345503823b90ee6bccf8e901b95p@chr7:28922549..28922561, +
3.9e-24FFCP PHASE1:Mm9::chr7:28914478..28914498,+#_f55f7345503823b90ee6bccf8e901b95p3@9530053A07Rik
3.9e-24FFCP PHASE2:Mm9::chr19:11353922..11353934,-#_f55f7345503823b90ee6bccf8e901b95p@chr19:11353922..11353934, -
3.9e-24FFCP PHASE2:Mm9::chr6:124520322..124520333,+#_f55f7345503823b90ee6bccf8e901b95p3@C1rb
3.9e-24FFCP PHASE1:Mm9::chr7:28900349..28900364,-#_f55f7345503823b90ee6bccf8e901b95p@chr7:28900349..28900364, -
3.9e-24FFCP PHASE1:Mm9::chr7:28924794..28924814,+#_f55f7345503823b90ee6bccf8e901b95p@chr7:28924794..28924814, +
3.9e-24FFCP PHASE2:Mm9::chr9:120464756..120464765,+#_f55f7345503823b90ee6bccf8e901b95p@chr9:120464756..120464765, +
3.9e-24FFCP PHASE1:Mm9::chr6:124520322..124520333,+#_f55f7345503823b90ee6bccf8e901b95p3@C1rb
3.9e-24FFCP PHASE2:Mm9::chr5:120136866..120136874,+#_f55f7345503823b90ee6bccf8e901b95p@chr5:120136866..120136874, +
3.9e-24FFCP PHASE2:Mm9::chr7:55028037..55028075,+#_f55f7345503823b90ee6bccf8e901b95p@chr7:55028037..55028075, +
3.9e-24FFCP PHASE2:Mm9::chr7:28914450..28914477,+#_f55f7345503823b90ee6bccf8e901b95p2@9530053A07Rik
3.9e-24FFCP PHASE1:Mm9::chr9:120464717..120464741,+#_f55f7345503823b90ee6bccf8e901b95p@chr9:120464717..120464741, +
3.9e-24FFCP PHASE2:Mm9::chr7:28914478..28914498,+#_f55f7345503823b90ee6bccf8e901b95p3@9530053A07Rik
3.9e-24FFCP PHASE1:Mm9::chr6:124520368..124520379,+#_f55f7345503823b90ee6bccf8e901b95p4@C1rb
3.9e-24FFCP PHASE2:Mm9::chr7:28900349..28900364,-#_f55f7345503823b90ee6bccf8e901b95p@chr7:28900349..28900364, -
3.9e-24FFCP PHASE2:Mm9::chr6:42547567..42547580,-#_f55f7345503823b90ee6bccf8e901b95p4@Fam115e
3.9e-24FFCP PHASE2:Mm9::chr9:36337031..36337049,-#_f55f7345503823b90ee6bccf8e901b95p@chr9:36337031..36337049, -
3.9e-24FFCP PHASE2:Mm9::chr7:28924794..28924814,+#_f55f7345503823b90ee6bccf8e901b95p@chr7:28924794..28924814, +
3.9e-24FFCP PHASE1:Mm9::chr19:11353922..11353934,-#_f55f7345503823b90ee6bccf8e901b95p@chr19:11353922..11353934, -
3.9e-24FFCP PHASE1:Mm9::chr9:120464756..120464765,+#_f55f7345503823b90ee6bccf8e901b95p@chr9:120464756..120464765, +
3.9e-24FFCP PHASE1:Mm9::chr6:42547567..42547580,-#_f55f7345503823b90ee6bccf8e901b95p4@Fam115e
3.9e-24FFCP PHASE1:Mm9::chr7:28914450..28914477,+#_f55f7345503823b90ee6bccf8e901b95p2@9530053A07Rik
3.9e-24FFCP PHASE1:Mm9::chr5:120136866..120136874,+#_f55f7345503823b90ee6bccf8e901b95p@chr5:120136866..120136874, +
3.9e-24FFCP PHASE2:Mm9::chr9:120464717..120464741,+#_f55f7345503823b90ee6bccf8e901b95p@chr9:120464717..120464741, +
3.9e-24FFCP PHASE2:Mm9::chr6:124520368..124520379,+#_f55f7345503823b90ee6bccf8e901b95p4@C1rb
5.1e-24FFCP PHASE1:Mm9::chr18:44264202..44264213,+#_e94eef5dad5c6ff67fccefe8c7e61ca3p4@Spink12
5.1e-24FFCP PHASE2:Mm9::chr18:44264202..44264213,+#_e94eef5dad5c6ff67fccefe8c7e61ca3p4@Spink12
6.42e-24FFCP PHASE1:Mm9::chr5:88020592..88020603,-#_392ce144d27962228ee24a60e6fc4602p2@Sult1e1
6.42e-24FFCP PHASE2:Mm9::chr5:88020592..88020603,-#_392ce144d27962228ee24a60e6fc4602p2@Sult1e1
1.68e-20FFCP PHASE2:Hg19::chr10:97262800..97262820,-#_0c95023fe4b0dccf4f77c1a03a26da55p@chr10:97262800..97262820, -
1.68e-20FFCP PHASE1:Hg19::chr10:97262800..97262820,-#_0c95023fe4b0dccf4f77c1a03a26da55p@chr10:97262800..97262820, -
2.05e-20FFCP PHASE1:Hg19::chr17:3824984..3824995,-#_78a1a96e14b2c1c07e3e54a4dae11411p@chr17:3824984..3824995, -
2.05e-20FFCP PHASE2:Hg19::chr17:3824984..3824995,-#_78a1a96e14b2c1c07e3e54a4dae11411p@chr17:3824984..3824995, -
4.75e-20FFCP PHASE2:Mm9::chr11:5749319..5749329,+#_ebc385447bf42dea56fc34a0de1628f8p@chr11:5749319..5749329, +
4.75e-20FFCP PHASE1:Mm9::chr19:21245439..21245446,-#_ebc385447bf42dea56fc34a0de1628f8p3@uc008gyt.1
4.75e-20FFCP PHASE2:Mm9::chr19:21245439..21245446,-#_ebc385447bf42dea56fc34a0de1628f8p3@uc008gyt.1
4.75e-20FFCP PHASE1:Mm9::chr11:5749319..5749329,+#_ebc385447bf42dea56fc34a0de1628f8p@chr11:5749319..5749329, +
1.79e-19FFCP PHASE1:Hg19::chr7:136759451..136759469,+#_f1251f14124d258d5d1f9b3050957c40p@chr7:136759451..136759469, +
1.79e-19FFCP PHASE2:Hg19::chr7:136759451..136759469,+#_f1251f14124d258d5d1f9b3050957c40p@chr7:136759451..136759469, +
8.95e-19FFCP PHASE1:Hg19::chr7:27239703..27239715,-#_3d9512e692611a9b27293c115970c31fp1@HOXA13
8.95e-19FFCP PHASE2:Hg19::chr7:27239703..27239715,-#_3d9512e692611a9b27293c115970c31fp1@HOXA13
1.04e-18FFCP PHASE1:Hg19::chr2:20402266..20402279,-#_1dc616dbde9424fd3ccc26c34bac49f2p@chr2:20402266..20402279, -
1.04e-18FFCP PHASE2:Hg19::chr8:30272825..30272837,+#_1dc616dbde9424fd3ccc26c34bac49f2p@chr8:30272825..30272837, +
1.04e-18FFCP PHASE1:Hg19::chr7:75958094..75958103,-#_1dc616dbde9424fd3ccc26c34bac49f2p@chr7:75958094..75958103, -
1.04e-18FFCP PHASE2:Hg19::chr2:20402266..20402279,-#_1dc616dbde9424fd3ccc26c34bac49f2p@chr2:20402266..20402279, -
1.04e-18FFCP PHASE2:Hg19::chr4:120437504..120437512,-#_1dc616dbde9424fd3ccc26c34bac49f2p@chr4:120437504..120437512, -
1.04e-18FFCP PHASE1:Hg19::chr4:120437504..120437512,-#_1dc616dbde9424fd3ccc26c34bac49f2p@chr4:120437504..120437512, -
1.04e-18FFCP PHASE2:Hg19::chr7:75958094..75958103,-#_1dc616dbde9424fd3ccc26c34bac49f2p@chr7:75958094..75958103, -
1.04e-18FFCP PHASE1:Hg19::chr8:30272825..30272837,+#_1dc616dbde9424fd3ccc26c34bac49f2p@chr8:30272825..30272837, +
1.04e-18FFCP PHASE2:Hg19::chr8:95683679..95683696,+#_1dc616dbde9424fd3ccc26c34bac49f2p@chr8:95683679..95683696, +
1.04e-18FFCP PHASE1:Hg19::chr8:95683679..95683696,+#_1dc616dbde9424fd3ccc26c34bac49f2p@chr8:95683679..95683696, +
1.16e-18FFCP PHASE2:Mm9::chr5:33251992..33251995,+#_d5b33c7495c8d99efb22eff172caa39ap@chr5:33251992..33251995, +
1.16e-18FFCP PHASE2:Mm9::chr6:42535901..42535907,-#_d5b33c7495c8d99efb22eff172caa39ap@chr6:42535901..42535907, -
1.16e-18FFCP PHASE2:Mm9::chr16:96752893..96752921,+#_d5b33c7495c8d99efb22eff172caa39ap@chr16:96752893..96752921, +
1.16e-18FFCP PHASE1:Mm9::chr6:42541927..42541932,-#_d5b33c7495c8d99efb22eff172caa39ap@chr6:42541927..42541932, -
1.16e-18FFCP PHASE1:Mm9::chr16:20188864..20188875,+#_d5b33c7495c8d99efb22eff172caa39ap@chr16:20188864..20188875, +
1.16e-18FFCP PHASE2:Mm9::chr9:122970758..122970759,+#_d5b33c7495c8d99efb22eff172caa39ap@chr9:122970758..122970759, +
1.16e-18FFCP PHASE1:Mm9::chr19:34791339..34791346,-#_d5b33c7495c8d99efb22eff172caa39ap@chr19:34791339..34791346, -
1.16e-18FFCP PHASE2:Mm9::chr7:55028223..55028250,+#_d5b33c7495c8d99efb22eff172caa39ap@chr7:55028223..55028250, +
1.16e-18FFCP PHASE2:Mm9::chr12:66314493..66314501,-#_d5b33c7495c8d99efb22eff172caa39ap1@uc007nrj.1
1.16e-18FFCP PHASE2:Mm9::chr3:95514619..95514622,-#_d5b33c7495c8d99efb22eff172caa39ap@chr3:95514619..95514622, -
1.16e-18FFCP PHASE2:Mm9::chr9:36341608..36341609,-#_d5b33c7495c8d99efb22eff172caa39ap@chr9:36341608..36341609, -
1.16e-18FFCP PHASE2:Mm9::chr2:80164541..80164545,+#_d5b33c7495c8d99efb22eff172caa39ap@chr2:80164541..80164545, +
1.16e-18FFCP PHASE2:Mm9::chr11:100107526..100107540,-#_d5b33c7495c8d99efb22eff172caa39ap@chr11:100107526..100107540, -
1.16e-18FFCP PHASE1:Mm9::chr7:123747566..123747567,+#_d5b33c7495c8d99efb22eff172caa39ap@chr7:123747566..123747567, +
1.16e-18FFCP PHASE1:Mm9::chr6:42536830..42536841,-#_d5b33c7495c8d99efb22eff172caa39ap@chr6:42536830..42536841, -
1.16e-18FFCP PHASE1:Mm9::chr3:95514619..95514622,-#_d5b33c7495c8d99efb22eff172caa39ap@chr3:95514619..95514622, -
1.16e-18FFCP PHASE2:Mm9::chr18:73894503..73894506,-#_d5b33c7495c8d99efb22eff172caa39ap@chr18:73894503..73894506, -
1.16e-18FFCP PHASE2:Mm9::chr2:137020090..137020093,+#_d5b33c7495c8d99efb22eff172caa39ap@chr2:137020090..137020093, +
1.16e-18FFCP PHASE2:Mm9::chr6:42548119..42548136,-#_d5b33c7495c8d99efb22eff172caa39ap12@Fam115e
1.16e-18FFCP PHASE1:Mm9::chr15:101506963..101506974,+#_d5b33c7495c8d99efb22eff172caa39ap@chr15:101506963..101506974, +
1.16e-18FFCP PHASE1:Mm9::chr6:42548119..42548136,-#_d5b33c7495c8d99efb22eff172caa39ap12@Fam115e
1.16e-18FFCP PHASE2:Mm9::chr16:20188864..20188875,+#_d5b33c7495c8d99efb22eff172caa39ap@chr16:20188864..20188875, +
1.16e-18FFCP PHASE2:Mm9::chr6:134172953..134172958,+#_d5b33c7495c8d99efb22eff172caa39ap@chr6:134172953..134172958, +
1.16e-18FFCP PHASE2:Mm9::chr12:80992302..80992309,+#_d5b33c7495c8d99efb22eff172caa39ap@chr12:80992302..80992309, +










Property "Property value" (as page type) with input value "UBPROP:0000001 "Anatomical system that has as its parts the organs concerned with the production and excretion of urine and those concerned with reproduction.[AAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process., Property "Property value" (as page type) with input value "UBPROP:0000002 "relationship type change: differentiates_from intermediate mesoderm (AAO:0010575) CHANGED TO: develops_from intermediate mesoderm (UBERON:0003064)[AAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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