UBERON:0004852: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| (3 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{UBERON | {{UBERON | ||
| | |alt_id= | ||
|comment=consider merging with 'endothelium' | |comment=consider merging with 'endothelium' | ||
|created_by= | |created_by= | ||
| | |def="An endothelium that is part of the cardiovascular system." [UBERON:cjm] | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|disjoint_from= | |||
|has_quality= | |has_quality= | ||
|id=UBERON:0004852 | |||
|is_a=UBERON:0001986 | |||
|is_obsolete= | |||
|located_in= | |located_in= | ||
|name=cardiovascular system endothelium | |||
|namespace=FANTOM | |||
|obo_creation_date= | |||
|part_of=UBERON:0004535 | |part_of=UBERON:0004535 | ||
|preceded_by= | |||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
| | |subset=vertebrate_core | ||
| | |synonym= | ||
|union_of= | |||
|xref=BTO:0001853;;GAID:519;;MA:0000717;;MESH:A.07.231.330;;TAO:0002171;;VHOG:0001217;;XAO:0000356;;ZFA:0001639 | |||
}} | }} | ||
Latest revision as of 17:48, 12 September 2014
| Name: | cardiovascular system endothelium | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "An endothelium that is part of the cardiovascular system." [UBERON:cjm] | ||
| Xrefs: |
| ||
| Comments: | consider merging with 'endothelium' | ||
| Subset: | vertebrate_core |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0001986(endothelium) |
|---|---|
| part_of: | UBERON:0004535(cardiovascular system) |
Children
| is a: | UBERON:0004638 (blood vessel endothelium),UBERON:0004700 (arterial system endothelium) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 11207-116A1 (Endothelial Cells - Aortic, donor0)
- 11243-116E1 (Endothelial Cells - Umbilical vein, donor1)
- 11263-116G3 (Endothelial Cells - Aortic, donor1)
- 11264-116G4 (Endothelial Cells - Artery, donor1)
- 11265-116G5 (Endothelial Cells - Microvascular, donor1)
- 11266-116G6 (Endothelial Cells - Thoracic, donor1)
- 11267-116G7 (Endothelial Cells - Vein, donor1)
- 11324-117E1 (Endothelial Cells - Umbilical vein, donor2)
- 11340-117F8 (Endothelial Cells - Aortic, donor2)
- 11341-117F9 (Endothelial Cells - Artery, donor2)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004852 (cardiovascular system endothelium), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 8.63e-150 | FFCP PHASE1:Hg19::chr18:33046982..33046991,-#_6f0b494069257d16dd754dae5096b295 | p@chr18:33046982..33046991, - |
| 8.63e-150 | FFCP PHASE2:Hg19::chr18:33046982..33046991,-#_6f0b494069257d16dd754dae5096b295 | p@chr18:33046982..33046991, - |
| 2.4e-126 | FFCP PHASE2:Hg19::chr2:56216687..56216727,-#_c646298dff10679d96bdc95e7fa09383 | p1@MIR216A |
| 2.4e-126 | FFCP PHASE1:Hg19::chr2:56216687..56216727,-#_c646298dff10679d96bdc95e7fa09383 | p1@MIR216A |
| 1.75e-121 | FFCP PHASE1:Hg19::chr6:78171774..78171792,+#_8726001fa91ddfda87c26fd3ab07d3de | p@chr6:78171774..78171792, + |
| 1.75e-121 | FFCP PHASE2:Hg19::chr6:78171774..78171792,+#_8726001fa91ddfda87c26fd3ab07d3de | p@chr6:78171774..78171792, + |
| 2.8e-121 | FFCP PHASE1:Hg19::chr18:33047157..33047168,-#_0a16803a73003f02ca4dc6cf16c3ea7f | p@chr18:33047157..33047168, - |
| 2.8e-121 | FFCP PHASE2:Hg19::chr18:33047157..33047168,-#_0a16803a73003f02ca4dc6cf16c3ea7f | p@chr18:33047157..33047168, - |
| 2.32e-119 | FFCP PHASE2:Hg19::chr7:139741849..139741879,-#_da546482a4b120b5c6b578c399349544 | p12@PARP12 |
| 2.32e-119 | FFCP PHASE1:Hg19::chr7:139741849..139741879,-#_da546482a4b120b5c6b578c399349544 | p12@PARP12 |
| 3.95e-117 | FFCP PHASE1:Hg19::chr7:139741594..139741615,-#_6836bd935747e0057f607ff333972675 | p5@PARP12 |
| 3.95e-117 | FFCP PHASE2:Hg19::chr7:139741594..139741615,-#_6836bd935747e0057f607ff333972675 | p5@PARP12 |
| 1.12e-116 | FFCP PHASE1:Hg19::chr12:118112251..118112272,-#_1e72efd6928e501eb736fe8deefdc6b4 | p12@KSR2 |
| 1.12e-116 | FFCP PHASE2:Hg19::chr12:118112251..118112272,-#_1e72efd6928e501eb736fe8deefdc6b4 | p12@KSR2 |
| 4.37e-116 | FFCP PHASE1:Hg19::chr3:43538305..43538325,-#_b21c1f45d923cb9eccc6b93e829c6817 | p@chr3:43538305..43538325, - |
| 4.37e-116 | FFCP PHASE2:Hg19::chr3:43538305..43538325,-#_b21c1f45d923cb9eccc6b93e829c6817 | p@chr3:43538305..43538325, - |
| 6.53e-113 | FFCP PHASE1:Hg19::chrX:71299684..71299699,+#_aec721f774192109678a0fa24b6d2016 | p@chrX:71299684..71299699, + |
| 6.53e-113 | FFCP PHASE2:Hg19::chrX:71299684..71299699,+#_aec721f774192109678a0fa24b6d2016 | p@chrX:71299684..71299699, + |
| 2.12e-108 | FFCP PHASE2:Hg19::chr10:50153703..50153720,+#_cb23de68638a0a8ddf5c6399889da907 | p7@WDFY4 |
| 2.12e-108 | FFCP PHASE1:Hg19::chr10:50153703..50153720,+#_cb23de68638a0a8ddf5c6399889da907 | p7@WDFY4 |
| 3.85e-107 | FFCP PHASE1:Hg19::chr10:50153735..50153750,+#_5c53bfca2c09e4ea81f1eeb25d873e45 | p6@WDFY4 |
| 3.85e-107 | FFCP PHASE2:Hg19::chr10:50153735..50153750,+#_5c53bfca2c09e4ea81f1eeb25d873e45 | p6@WDFY4 |
| 3.44e-106 | FFCP PHASE1:Hg19::chrX:15518894..15518905,+#_1d50b80e83758105bcb492861dd91140 | p2@BMX |
| 3.44e-106 | FFCP PHASE2:Hg19::chrX:15518894..15518905,+#_1d50b80e83758105bcb492861dd91140 | p2@BMX |
| 1.68e-105 | FFCP PHASE1:Hg19::chr6:3753188..3753192,-#_ea8a11939929622d0e8fbe7290970dea | p@chr6:3753188..3753192, - |
| 1.68e-105 | FFCP PHASE2:Hg19::chr6:3753188..3753192,-#_ea8a11939929622d0e8fbe7290970dea | p@chr6:3753188..3753192, - |
| 3.71e-103 | FFCP PHASE1:Hg19::chr5:95920642..95920681,+#_0a8dd14f2d2e89ffa28e84c379bb3fb2 | p1@ENST00000513158 |
| 3.71e-103 | FFCP PHASE2:Hg19::chr5:95920642..95920681,+#_0a8dd14f2d2e89ffa28e84c379bb3fb2 | p1@ENST00000513158 |
| 8.1e-103 | FFCP PHASE2:Hg19::chr10:99655692..99655725,-#_ab5d08b683b78a36dcf4d01fb20274a9 | p@chr10:99655692..99655725, - |
| 8.1e-103 | FFCP PHASE1:Hg19::chr10:99655692..99655725,-#_ab5d08b683b78a36dcf4d01fb20274a9 | p@chr10:99655692..99655725, - |
| 1.53e-102 | FFCP PHASE1:Hg19::chr7:150329732..150329739,-#_7e9280766ea4b6fc44947bf27a99b09c | p8@GIMAP6 |
| 1.53e-102 | FFCP PHASE2:Hg19::chr7:150329732..150329739,-#_7e9280766ea4b6fc44947bf27a99b09c | p8@GIMAP6 |
| 3.68e-102 | FFCP PHASE1:Hg19::chr14:75469820..75469826,+#_be6671218bbd4c9b9cc61272ff559de0 | p4@EIF2B2 |
| 3.68e-102 | FFCP PHASE2:Hg19::chr14:75469820..75469826,+#_be6671218bbd4c9b9cc61272ff559de0 | p4@EIF2B2 |
| 4.84e-102 | FFCP PHASE1:Hg19::chr6:78171746..78171769,+#_03c08ee6eff7ec4d9af49762613bb67d | p@chr6:78171746..78171769, + |
| 4.84e-102 | FFCP PHASE2:Hg19::chr6:78171746..78171769,+#_03c08ee6eff7ec4d9af49762613bb67d | p@chr6:78171746..78171769, + |
| 2.83e-101 | FFCP PHASE1:Hg19::chr6:148664333..148664338,-#_61a141dd3d92afd4b2e8706d8f593b68 | p@chr6:148664333..148664338, - |
| 2.83e-101 | FFCP PHASE2:Hg19::chr6:148664333..148664338,-#_61a141dd3d92afd4b2e8706d8f593b68 | p@chr6:148664333..148664338, - |
| 1.76e-99 | FFCP PHASE1:Hg19::chr14:38725228..38725236,-#_6e8c20915865ce437a9319c2c8e55d74 | p5@CLEC14A |
| 1.76e-99 | FFCP PHASE2:Hg19::chr14:38725228..38725236,-#_6e8c20915865ce437a9319c2c8e55d74 | p5@CLEC14A |
| 5.12e-99 | FFCP PHASE1:Hg19::chr5:34656634..34656645,+#_7e33928cdbc56fde98059dfa49f4fbd3 | p15@RAI14 |
| 5.12e-99 | FFCP PHASE2:Hg19::chr5:34656634..34656645,+#_7e33928cdbc56fde98059dfa49f4fbd3 | p15@RAI14 |
| 3.9e-98 | FFCP PHASE1:Hg19::chr17:62084108..62084111,-#_e85c347079a747415a5805be366e23bd | p5@ICAM2 |
| 3.9e-98 | FFCP PHASE2:Hg19::chr17:62084108..62084111,-#_e85c347079a747415a5805be366e23bd | p5@ICAM2 |
| 1.28e-97 | FFCP PHASE2:Hg19::chr4:145566874..145566889,+#_c57b3d8ac81a84296ce311a719afe156 | p15@HHIP |
| 1.28e-97 | FFCP PHASE1:Hg19::chr4:145566874..145566889,+#_c57b3d8ac81a84296ce311a719afe156 | p15@HHIP |
| 1.51e-97 | FFCP PHASE2:Hg19::chr9:139563124..139563129,+#_8feceb4e764704576a4436fe3e35d6f8 | p@chr9:139563124..139563129, + |
| 1.51e-97 | FFCP PHASE1:Hg19::chr9:139563124..139563129,+#_8feceb4e764704576a4436fe3e35d6f8 | p@chr9:139563124..139563129, + |
| 5.66e-97 | FFCP PHASE1:Hg19::chr7:150690812..150690817,+#_b018b5fcf01714fc66108e1d1227666d | p10@NOS3 |
| 5.66e-97 | FFCP PHASE2:Hg19::chr7:150690812..150690817,+#_b018b5fcf01714fc66108e1d1227666d | p10@NOS3 |
| 1.44e-96 | FFCP PHASE1:Hg19::chr5:176433333..176433349,-#_f3e086fa748e75189a5f36159d8e11f4 | p11@UIMC1 |
| 1.44e-96 | FFCP PHASE2:Hg19::chr5:176433333..176433349,-#_f3e086fa748e75189a5f36159d8e11f4 | p11@UIMC1 |
| 3.94e-95 | FFCP PHASE1:Hg19::chr14:38725249..38725254,-#_c2b0a15e6d826b0d318840101e7d5ad1 | p6@CLEC14A |
| 3.94e-95 | FFCP PHASE2:Hg19::chr14:38725249..38725254,-#_c2b0a15e6d826b0d318840101e7d5ad1 | p6@CLEC14A |
| 4.62e-95 | FFCP PHASE1:Hg19::chr11:124761247..124761258,-#_a07a49635a82884b26023e42755d0bd3 | p@chr11:124761247..124761258, - |
| 4.62e-95 | FFCP PHASE2:Hg19::chr11:124761247..124761258,-#_a07a49635a82884b26023e42755d0bd3 | p@chr11:124761247..124761258, - |
| 6.81e-95 | FFCP PHASE2:Hg19::chr1:22264210..22264241,+#_d23aee161f8797a9a4a7e87293a9ce89 | p@chr1:22264210..22264241, + |
| 6.81e-95 | FFCP PHASE1:Hg19::chr1:22264210..22264241,+#_d23aee161f8797a9a4a7e87293a9ce89 | p@chr1:22264210..22264241, + |
| 5.14e-93 | FFCP PHASE1:Hg19::chr9:139543445..139543462,+#_35e675769a761bc8935d9ff5454dbbed | p@chr9:139543445..139543462, + |
| 5.14e-93 | FFCP PHASE2:Hg19::chr9:139543445..139543462,+#_35e675769a761bc8935d9ff5454dbbed | p@chr9:139543445..139543462, + |
| 3.62e-92 | FFCP PHASE2:Hg19::chr13:32835894..32835907,+#_d0f824be61cc377086cd71ad1ebd6c62 | p@chr13:32835894..32835907, + |
| 3.62e-92 | FFCP PHASE1:Hg19::chr13:32835894..32835907,+#_d0f824be61cc377086cd71ad1ebd6c62 | p@chr13:32835894..32835907, + |
| 6.53e-92 | FFCP PHASE2:Hg19::chr9:139541134..139541139,+#_ae6ace17dc4695a895c50345eaef308b | p@chr9:139541134..139541139, + |
| 6.53e-92 | FFCP PHASE1:Hg19::chr9:139541134..139541139,+#_ae6ace17dc4695a895c50345eaef308b | p@chr9:139541134..139541139, + |
| 8.31e-92 | FFCP PHASE2:Hg19::chr12:105863705..105863718,+#_f8690e686a91fb0d494f9eb0ab7ed534 | p@chr12:105863705..105863718, + |
| 8.31e-92 | FFCP PHASE1:Hg19::chr12:105863705..105863718,+#_f8690e686a91fb0d494f9eb0ab7ed534 | p@chr12:105863705..105863718, + |
| 1.78e-91 | FFCP PHASE1:Hg19::chr19:41985048..41985050,-#_c28ae08ba780ed6e1f2dd200dc2f6c71 | p@chr19:41985048..41985050, - |
| 1.78e-91 | FFCP PHASE2:Hg19::chr19:41985048..41985050,-#_c28ae08ba780ed6e1f2dd200dc2f6c71 | p@chr19:41985048..41985050, - |
| 1.27e-90 | FFCP PHASE1:Hg19::chr12:105863636..105863650,+#_326442fa35a5b0856c4833f03807d4cb | p@chr12:105863636..105863650, + |
| 1.27e-90 | FFCP PHASE2:Hg19::chr12:105863636..105863650,+#_326442fa35a5b0856c4833f03807d4cb | p@chr12:105863636..105863650, + |
| 4.84e-90 | FFCP PHASE2:Hg19::chr16:2220383..2220402,+#_af923a8f1d0215921d97421893f60a00 | p@chr16:2220383..2220402, + |
| 4.84e-90 | FFCP PHASE1:Hg19::chr16:2220383..2220402,+#_af923a8f1d0215921d97421893f60a00 | p@chr16:2220383..2220402, + |
| 4.93e-90 | FFCP PHASE1:Hg19::chr9:139543390..139543404,+#_7aed0dedb4ba64a8abb7be8950a0a5e5 | p@chr9:139543390..139543404, + |
| 4.93e-90 | FFCP PHASE2:Hg19::chr9:139543390..139543404,+#_7aed0dedb4ba64a8abb7be8950a0a5e5 | p@chr9:139543390..139543404, + |
| 2.05e-88 | FFCP PHASE1:Hg19::chr10:129785574..129785580,+#_734a61ecfa5c77ea60350b9241601710 | p14@PTPRE |
| 2.05e-88 | FFCP PHASE2:Hg19::chr10:129785574..129785580,+#_734a61ecfa5c77ea60350b9241601710 | p14@PTPRE |
| 2.37e-88 | FFCP PHASE1:Hg19::chr13:32835912..32835936,+#_3da25df016f3f53b07f2e4ea3b138e51 | p@chr13:32835912..32835936, + |
| 2.37e-88 | FFCP PHASE2:Hg19::chr13:32835912..32835936,+#_3da25df016f3f53b07f2e4ea3b138e51 | p@chr13:32835912..32835936, + |
| 3.48e-88 | FFCP PHASE1:Hg19::chr6:11607864..11607875,+#_11db171e77859468581ee5f9dcb7b4dc | p@chr6:11607864..11607875, + |
| 3.48e-88 | FFCP PHASE2:Hg19::chr6:11607864..11607875,+#_11db171e77859468581ee5f9dcb7b4dc | p@chr6:11607864..11607875, + |
| 8.3e-88 | FFCP PHASE1:Hg19::chr1:16076122..16076138,-#_bb48624ad8e4cc44d3d64bfe55b2f8f9 | p1@ENST00000418525 |
| 8.3e-88 | FFCP PHASE2:Hg19::chr1:16076122..16076138,-#_bb48624ad8e4cc44d3d64bfe55b2f8f9 | p1@ENST00000418525 |
| 1.93e-87 | FFCP PHASE1:Hg19::chr12:96830523..96830532,+#_2760afd7c3855aba3b1d057e66b080bb | p@chr12:96830523..96830532, + |
| 1.93e-87 | FFCP PHASE2:Hg19::chr12:96830523..96830532,+#_2760afd7c3855aba3b1d057e66b080bb | p@chr12:96830523..96830532, + |
| 3.38e-87 | FFCP PHASE1:Hg19::chr12:12491541..12491552,-#_468abfade1cc40a6ac1b52d818f6216b | p11@MANSC1 |
| 3.38e-87 | FFCP PHASE2:Hg19::chr12:12491541..12491552,-#_468abfade1cc40a6ac1b52d818f6216b | p11@MANSC1 |
| 3.45e-85 | FFCP PHASE2:Hg19::chr18:33047117..33047138,-#_7d5beb3e1088f8d9cecaed14264661f5 | p@chr18:33047117..33047138, - |
| 3.45e-85 | FFCP PHASE1:Hg19::chr18:33047117..33047138,-#_7d5beb3e1088f8d9cecaed14264661f5 | p@chr18:33047117..33047138, - |
| 4.2e-85 | FFCP PHASE2:Hg19::chr18:33047076..33047099,-#_9b16dacc5c913c279755773fed2d81ea | p@chr18:33047076..33047099, - |
| 4.2e-85 | FFCP PHASE1:Hg19::chr18:33047076..33047099,-#_9b16dacc5c913c279755773fed2d81ea | p@chr18:33047076..33047099, - |
| 1.18e-84 | FFCP PHASE2:Hg19::chr1:28785607..28785624,+#_d7c8797243db6c1e6d8db20d620408b6 | p@chr1:28785607..28785624, + |
| 1.18e-84 | FFCP PHASE1:Hg19::chr1:28785607..28785624,+#_d7c8797243db6c1e6d8db20d620408b6 | p@chr1:28785607..28785624, + |
| 1.82e-84 | FFCP PHASE1:Hg19::chr3:58034268..58034295,+#_f1fbf98df016b0f4d325cabc9aea73c4 | p@chr3:58034268..58034295, + |
| 1.82e-84 | FFCP PHASE2:Hg19::chr3:58034268..58034295,+#_f1fbf98df016b0f4d325cabc9aea73c4 | p@chr3:58034268..58034295, + |
| 3.24e-84 | FFCP PHASE1:Hg19::chr15:39423060..39423066,+#_4bb46b0a98de35af0d0eb39c7fc8eb61 | p@chr15:39423060..39423066, + |
| 3.24e-84 | FFCP PHASE2:Hg19::chr15:39423060..39423066,+#_4bb46b0a98de35af0d0eb39c7fc8eb61 | p@chr15:39423060..39423066, + |
| 1.28e-80 | FFCP PHASE1:Hg19::chr2:225266779..225266786,-#_d393604aa5e7c445a728a8b20b26672c | p4@FAM124B |
| 1.28e-80 | FFCP PHASE2:Hg19::chr2:225266779..225266786,-#_d393604aa5e7c445a728a8b20b26672c | p4@FAM124B |
| 3.03e-80 | FFCP PHASE1:Hg19::chr17:47287786..47287797,+#_61e56326c30fec3e75abebeae94acb0a | p4@ABI3 |
| 3.03e-80 | FFCP PHASE2:Hg19::chr17:47287786..47287797,+#_61e56326c30fec3e75abebeae94acb0a | p4@ABI3 |
