UBERON:0005171: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| (One intermediate revision by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{UBERON | {{UBERON | ||
| | |alt_id= | ||
|comment=TODO - MA distinguishes between bile duct, hepatic duct, common bile duct and common hepatic duct. in FMA hepatic duct and common hepatic duct are the same | |comment=TODO - MA distinguishes between bile duct, hepatic duct, common bile duct and common hepatic duct. in FMA hepatic duct and common hepatic duct are the same | ||
|created_by= | |created_by= | ||
| | |def="The hepatic duct is the duct that leads from the liver to the bile duct[GO]. A duct that carries bile from the liver to the small intestine[ZFA]." [GO:0061011] | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|disjoint_from= | |||
|has_quality= | |has_quality= | ||
|id=UBERON:0005171 | |||
|is_a=UBERON:0002394 | |||
|is_obsolete= | |||
|located_in= | |located_in= | ||
|name=hepatic duct | |||
|namespace=FANTOM | |||
|obo_creation_date= | |||
|part_of=UBERON:0001173 | |part_of=UBERON:0001173 | ||
|preceded_by= | |||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl;;UBPROP:0000001 "A duct that carries bile from the liver to the small intestine.[TAO]" xsd:string | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl;;UBPROP:0000001 "A duct that carries bile from the liver to the small intestine.[TAO]" xsd:string | ||
| | |subset=vertebrate_core | ||
| | |synonym= | ||
|union_of= | |||
|xref=EHDAA2:0000741;;EHDAA:3049;;EMAPA:16843;;EMAPA:18672;;galen:HepaticDuct;;MA:0000357;;ncithesaurus:Hepatic_Duct;;OpenCyc:Mx4rvWo8WJwpEbGdrcN5Y29ycA;;SCTID:245399002;;TAO:0001100;;VHOG:0000219;;ZFA:0001100 | |||
}} | }} | ||
Latest revision as of 17:51, 12 September 2014
| Name: | hepatic duct | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "The hepatic duct is the duct that leads from the liver to the bile duct[GO]. A duct that carries bile from the liver to the small intestine[ZFA]." [GO:0061011] | ||
| Xrefs: |
| ||
| Comments: | TODO - MA distinguishes between bile duct, hepatic duct, common bile duct and common hepatic duct. in FMA hepatic duct and common hepatic duct are the same | ||
| Subset: | vertebrate_core |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0002394(bile duct) |
|---|---|
| part_of: | UBERON:0001173(biliary tree) |
Children
| develops from: | UBERON:0001280 (liver parenchyma) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0005171 (hepatic duct), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 9.74e-88 | FFCP PHASE2:Hg19::chr7:158330204..158330217,+#_163eb2863c0778f62d6dc7c29d82ee3a | p2@ENST00000448698 |
| 9.74e-88 | FFCP PHASE1:Hg19::chr7:158330204..158330217,+#_163eb2863c0778f62d6dc7c29d82ee3a | p2@ENST00000448698 |
| 3.07e-86 | FFCP PHASE1:Mm9::chr15:90508949..90508955,-#_4d0af0543b7169012267506dfa6a469b | p@chr15:90508949..90508955, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr5:114422970..114422985,-#_4d0af0543b7169012267506dfa6a469b | p@chr5:114422970..114422985, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr18:60398371..60398393,-#_4d0af0543b7169012267506dfa6a469b | p@chr18:60398371..60398393, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr6:51831254..51831256,-#_4d0af0543b7169012267506dfa6a469b | p@chr6:51831254..51831256, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr3:104857794..104857802,-#_4d0af0543b7169012267506dfa6a469b | p@chr3:104857794..104857802, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr12:86691530..86691535,-#_4d0af0543b7169012267506dfa6a469b | p@chr12:86691530..86691535, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr11:48685851..48685860,-#_4d0af0543b7169012267506dfa6a469b | p@chr11:48685851..48685860, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr11:115280630..115280662,+#_4d0af0543b7169012267506dfa6a469b | p@chr11:115280630..115280662, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr15:82207617..82207621,+#_4d0af0543b7169012267506dfa6a469b | p@chr15:82207617..82207621, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr7:52781901..52781904,+#_4d0af0543b7169012267506dfa6a469b | p@chr7:52781901..52781904, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr18:39513150..39513152,+#_4d0af0543b7169012267506dfa6a469b | p@chr18:39513150..39513152, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr17:35093616..35093631,-#_4d0af0543b7169012267506dfa6a469b | p@chr17:35093616..35093631, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr5:124112234..124112240,+#_4d0af0543b7169012267506dfa6a469b | p@chr5:124112234..124112240, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr11:107196799..107196814,+#_4d0af0543b7169012267506dfa6a469b | p@chr11:107196799..107196814, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr17:35093616..35093631,-#_4d0af0543b7169012267506dfa6a469b | p@chr17:35093616..35093631, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr7:87919399..87919406,+#_4d0af0543b7169012267506dfa6a469b | p@chr7:87919399..87919406, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr10:60279719..60279737,-#_4d0af0543b7169012267506dfa6a469b | p@chr10:60279719..60279737, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr3:121593688..121593695,+#_4d0af0543b7169012267506dfa6a469b | p@chr3:121593688..121593695, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr3:90270007..90270012,+#_4d0af0543b7169012267506dfa6a469b | p@chr3:90270007..90270012, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr13:96429602..96429605,-#_4d0af0543b7169012267506dfa6a469b | p@chr13:96429602..96429605, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr17:24807620..24807650,-#_4d0af0543b7169012267506dfa6a469b | p@chr17:24807620..24807650, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr11:54785454..54785456,-#_4d0af0543b7169012267506dfa6a469b | p@chr11:54785454..54785456, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr8:89310639..89310641,-#_4d0af0543b7169012267506dfa6a469b | p@chr8:89310639..89310641, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr13:113550715..113550722,-#_4d0af0543b7169012267506dfa6a469b | p@chr13:113550715..113550722, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr18:38831400..38831402,-#_4d0af0543b7169012267506dfa6a469b | p@chr18:38831400..38831402, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr13:113542610..113542614,+#_4d0af0543b7169012267506dfa6a469b | p@chr13:113542610..113542614, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr4:137487112..137487117,+#_4d0af0543b7169012267506dfa6a469b | p@chr4:137487112..137487117, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr10:93819538..93819549,+#_4d0af0543b7169012267506dfa6a469b | p@chr10:93819538..93819549, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr18:44793802..44793835,+#_4d0af0543b7169012267506dfa6a469b | p@chr18:44793802..44793835, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr10:85585991..85586025,-#_4d0af0543b7169012267506dfa6a469b | p@chr10:85585991..85586025, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr12:85288471..85288502,+#_4d0af0543b7169012267506dfa6a469b | p@chr12:85288471..85288502, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr3:104857794..104857802,-#_4d0af0543b7169012267506dfa6a469b | p@chr3:104857794..104857802, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr14:8928284..8928331,+#_4d0af0543b7169012267506dfa6a469b | p@chr14:8928284..8928331, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr16:85547242..85547252,+#_4d0af0543b7169012267506dfa6a469b | p@chr16:85547242..85547252, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr15:59435855..59435878,-#_4d0af0543b7169012267506dfa6a469b | p@chr15:59435855..59435878, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr12:81955014..81955018,+#_4d0af0543b7169012267506dfa6a469b | p@chr12:81955014..81955018, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr11:48685851..48685860,-#_4d0af0543b7169012267506dfa6a469b | p@chr11:48685851..48685860, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr18:47491114..47491123,+#_4d0af0543b7169012267506dfa6a469b | p@chr18:47491114..47491123, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr16:30944451..30944485,+#_4d0af0543b7169012267506dfa6a469b | p@chr16:30944451..30944485, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr10:93499468..93499494,-#_4d0af0543b7169012267506dfa6a469b | p@chr10:93499468..93499494, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr15:82209805..82209851,+#_4d0af0543b7169012267506dfa6a469b | p@chr15:82209805..82209851, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr1:132405466..132405470,+#_4d0af0543b7169012267506dfa6a469b | p@chr1:132405466..132405470, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr2:129407463..129407468,-#_4d0af0543b7169012267506dfa6a469b | p@chr2:129407463..129407468, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr13:96429295..96429302,-#_4d0af0543b7169012267506dfa6a469b | p@chr13:96429295..96429302, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr10:8471698..8471701,+#_4d0af0543b7169012267506dfa6a469b | p@chr10:8471698..8471701, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr18:35900327..35900366,+#_4d0af0543b7169012267506dfa6a469b | p@chr18:35900327..35900366, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr12:88237840..88237851,-#_4d0af0543b7169012267506dfa6a469b | p@chr12:88237840..88237851, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr10:85585991..85586025,-#_4d0af0543b7169012267506dfa6a469b | p@chr10:85585991..85586025, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr17:34796428..34796430,-#_4d0af0543b7169012267506dfa6a469b | p@chr17:34796428..34796430, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr16:11009028..11009039,+#_4d0af0543b7169012267506dfa6a469b | p4@Gm4262 |
| 3.07e-86 | FFCP PHASE2:Mm9::chr4:57687477..57687488,+#_4d0af0543b7169012267506dfa6a469b | p@chr4:57687477..57687488, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr12:25364645..25364655,+#_4d0af0543b7169012267506dfa6a469b | p@chr12:25364645..25364655, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr19:29573929..29573932,+#_4d0af0543b7169012267506dfa6a469b | p@chr19:29573929..29573932, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr4:62009160..62009164,-#_4d0af0543b7169012267506dfa6a469b | p@chr4:62009160..62009164, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr6:51831254..51831256,-#_4d0af0543b7169012267506dfa6a469b | p@chr6:51831254..51831256, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr5:64344878..64344887,-#_4d0af0543b7169012267506dfa6a469b | p@chr5:64344878..64344887, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr18:5125608..5125613,+#_4d0af0543b7169012267506dfa6a469b | p@chr18:5125608..5125613, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr17:34798555..34798562,+#_4d0af0543b7169012267506dfa6a469b | p@chr17:34798555..34798562, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr16:91441786..91441787,-#_4d0af0543b7169012267506dfa6a469b | p@chr16:91441786..91441787, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr17:48822294..48822295,-#_4d0af0543b7169012267506dfa6a469b | p@chr17:48822294..48822295, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr8:114123814..114123821,-#_4d0af0543b7169012267506dfa6a469b | p@chr8:114123814..114123821, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr12:74684893..74684910,-#_4d0af0543b7169012267506dfa6a469b | p@chr12:74684893..74684910, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr4:126939557..126939562,+#_4d0af0543b7169012267506dfa6a469b | p@chr4:126939557..126939562, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr17:28107053..28107062,-#_4d0af0543b7169012267506dfa6a469b | p@chr17:28107053..28107062, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr8:3311867..3311873,+#_4d0af0543b7169012267506dfa6a469b | p@chr8:3311867..3311873, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr13:113053257..113053258,+#_4d0af0543b7169012267506dfa6a469b | p@chr13:113053257..113053258, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr10:94580525..94580530,+#_4d0af0543b7169012267506dfa6a469b | p@chr10:94580525..94580530, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr16:30944451..30944485,+#_4d0af0543b7169012267506dfa6a469b | p@chr16:30944451..30944485, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr15:97402708..97402712,+#_4d0af0543b7169012267506dfa6a469b | p@chr15:97402708..97402712, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr4:137487112..137487117,+#_4d0af0543b7169012267506dfa6a469b | p@chr4:137487112..137487117, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr8:87745380..87745385,+#_4d0af0543b7169012267506dfa6a469b | p@chr8:87745380..87745385, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr11:115280630..115280662,+#_4d0af0543b7169012267506dfa6a469b | p@chr11:115280630..115280662, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr14:15179132..15179141,+#_4d0af0543b7169012267506dfa6a469b | p8@Il3ra |
| 3.07e-86 | FFCP PHASE1:Mm9::chr12:86691575..86691580,-#_4d0af0543b7169012267506dfa6a469b | p@chr12:86691575..86691580, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr11:54785454..54785456,-#_4d0af0543b7169012267506dfa6a469b | p@chr11:54785454..54785456, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr11:118287827..118287833,-#_4d0af0543b7169012267506dfa6a469b | p@chr11:118287827..118287833, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr15:82209805..82209851,+#_4d0af0543b7169012267506dfa6a469b | p@chr15:82209805..82209851, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr11:88890706..88890745,+#_4d0af0543b7169012267506dfa6a469b | p@chr11:88890706..88890745, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr12:8400090..8400093,+#_4d0af0543b7169012267506dfa6a469b | p@chr12:8400090..8400093, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr1:173044327..173044331,+#_4d0af0543b7169012267506dfa6a469b | p@chr1:173044327..173044331, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr3:9705000..9705004,-#_4d0af0543b7169012267506dfa6a469b | p4@Pag1 |
| 3.07e-86 | FFCP PHASE1:Mm9::chr18:4336287..4336296,-#_4d0af0543b7169012267506dfa6a469b | p8@Map3k8 |
| 3.07e-86 | FFCP PHASE1:Mm9::chr13:100000226..100000230,+#_4d0af0543b7169012267506dfa6a469b | p@chr13:100000226..100000230, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr10:8586393..8586401,+#_4d0af0543b7169012267506dfa6a469b | p@chr10:8586393..8586401, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr9:42915101..42915106,-#_4d0af0543b7169012267506dfa6a469b | p@chr9:42915101..42915106, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr9:42915101..42915106,-#_4d0af0543b7169012267506dfa6a469b | p@chr9:42915101..42915106, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr17:35093764..35093773,-#_4d0af0543b7169012267506dfa6a469b | p@chr17:35093764..35093773, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr5:32912678..32912687,+#_4d0af0543b7169012267506dfa6a469b | p@chr5:32912678..32912687, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr8:86713876..86713879,+#_4d0af0543b7169012267506dfa6a469b | p@chr8:86713876..86713879, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr4:86335502..86335509,+#_4d0af0543b7169012267506dfa6a469b | p@chr4:86335502..86335509, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr17:35093764..35093773,-#_4d0af0543b7169012267506dfa6a469b | p@chr17:35093764..35093773, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr12:8400090..8400093,+#_4d0af0543b7169012267506dfa6a469b | p@chr12:8400090..8400093, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr10:94580525..94580530,+#_4d0af0543b7169012267506dfa6a469b | p@chr10:94580525..94580530, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chrX:166418658..166418683,+#_4d0af0543b7169012267506dfa6a469b | p@chrX:166418658..166418683, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr18:35900327..35900366,+#_4d0af0543b7169012267506dfa6a469b | p@chr18:35900327..35900366, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr16:28911901..28911906,-#_4d0af0543b7169012267506dfa6a469b | p@chr16:28911901..28911906, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr10:117419958..117419964,+#_4d0af0543b7169012267506dfa6a469b | p@chr10:117419958..117419964, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr5:75375903..75375931,+#_4d0af0543b7169012267506dfa6a469b | p@chr5:75375903..75375931, + |
Property "Property value" (as page type) with input value "UBPROP:0000001 "A duct that carries bile from the liver to the small intestine.[TAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
