UBERON:0005965: Difference between revisions
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{{UBERON | {{UBERON | ||
| | |alt_id= | ||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
| | |def="Outflow part of atrium which consists of wall and cavity of the outflow part of right atrium and the tricuspid valve.[FMA]" [FMA:9550, FMA:FMA] | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|disjoint_from= | |||
|has_quality= | |has_quality= | ||
|id=UBERON:0005965 | |||
|is_a=UBERON:0005946 | |||
|is_obsolete= | |||
|located_in= | |located_in= | ||
|name=outflow part of right atrium | |||
|namespace=FANTOM | |||
|obo_creation_date= | |||
|part_of=UBERON:0002078 | |part_of=UBERON:0002078 | ||
|preceded_by= | |||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
| | |subset= | ||
| | |synonym="main part of right atrium" EXACT [FMA:9550];;"outflow tract of right atrium" EXACT [FMA:9550] | ||
|union_of= | |||
|xref=FMA:9550 | |||
}} | }} | ||
Latest revision as of 17:55, 12 September 2014
| Name: | outflow part of right atrium | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "Outflow part of atrium which consists of wall and cavity of the outflow part of right atrium and the tricuspid valve.[FMA]" [FMA:9550, FMA:FMA] | ||
| Xrefs: |
| ||
| Synonyms: |
"main part of right atrium" EXACT [FMA:9550] "outflow tract of right atrium" EXACT [FMA:9550] |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0005946(outflow tract of atrium) |
|---|---|
| part_of: | UBERON:0002078(right cardiac atrium) |
Children
| part of: | UBERON:0002134 (tricuspid valve) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10207-103F9 (heart - tricuspid valve, adult)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0005965 (outflow part of right atrium), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 5.42e-195 | FFCP PHASE1:Hg19::chr15:86272097..86272099,+#_f3d0ee6d927607664b3e407fa47389e4 | p@chr15:86272097..86272099, + |
| 5.42e-195 | FFCP PHASE1:Hg19::chr5:99390735..99390743,-#_f3d0ee6d927607664b3e407fa47389e4 | p@chr5:99390735..99390743, - |
| 5.42e-195 | FFCP PHASE2:Hg19::chr15:86272097..86272099,+#_f3d0ee6d927607664b3e407fa47389e4 | p@chr15:86272097..86272099, + |
| 5.42e-195 | FFCP PHASE2:Hg19::chr10:92678409..92678410,-#_f3d0ee6d927607664b3e407fa47389e4 | p@chr10:92678409..92678410, - |
| 5.42e-195 | FFCP PHASE2:Hg19::chr5:99390735..99390743,-#_f3d0ee6d927607664b3e407fa47389e4 | p@chr5:99390735..99390743, - |
| 5.42e-195 | FFCP PHASE1:Hg19::chr10:92678409..92678410,-#_f3d0ee6d927607664b3e407fa47389e4 | p@chr10:92678409..92678410, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr2:179656442..179656451,-#_82ca7315f20579c577b345686fa34416 | p@chr2:179656442..179656451, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr7:97501400..97501407,-#_82ca7315f20579c577b345686fa34416 | p16@ASNS |
| 9.37e-99 | FFCP PHASE1:Hg19::chr2:179656442..179656451,-#_82ca7315f20579c577b345686fa34416 | p@chr2:179656442..179656451, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr7:97501400..97501407,-#_82ca7315f20579c577b345686fa34416 | p16@ASNS |
| 2.55e-98 | FFCP PHASE1:Hg19::chr5:157747715..157747717,+#_6fbdaad8df0179f0e4a04d7beff8b8eb | p@chr5:157747715..157747717, + |
| 2.55e-98 | FFCP PHASE1:Hg19::chr18:39821929..39821932,+#_6fbdaad8df0179f0e4a04d7beff8b8eb | p@chr18:39821929..39821932, + |
| 2.55e-98 | FFCP PHASE2:Hg19::chr6:70647888..70647891,+#_6fbdaad8df0179f0e4a04d7beff8b8eb | p@chr6:70647888..70647891, + |
| 2.55e-98 | FFCP PHASE1:Hg19::chrX:136514398..136514433,-#_6fbdaad8df0179f0e4a04d7beff8b8eb | p@chrX:136514398..136514433, - |
| 2.55e-98 | FFCP PHASE2:Hg19::chr22:36000901..36000903,-#_6fbdaad8df0179f0e4a04d7beff8b8eb | p@chr22:36000901..36000903, - |
| 2.55e-98 | FFCP PHASE2:Hg19::chr6:104898467..104898469,-#_6fbdaad8df0179f0e4a04d7beff8b8eb | p@chr6:104898467..104898469, - |
| 2.55e-98 | FFCP PHASE2:Hg19::chr8:24530708..24530710,+#_6fbdaad8df0179f0e4a04d7beff8b8eb | p@chr8:24530708..24530710, + |
| 2.55e-98 | FFCP PHASE1:Hg19::chr22:36000901..36000903,-#_6fbdaad8df0179f0e4a04d7beff8b8eb | p@chr22:36000901..36000903, - |
| 2.55e-98 | FFCP PHASE1:Hg19::chr14:68375236..68375240,+#_6fbdaad8df0179f0e4a04d7beff8b8eb | p9@RAD51B |
| 2.55e-98 | FFCP PHASE2:Hg19::chr5:157747715..157747717,+#_6fbdaad8df0179f0e4a04d7beff8b8eb | p@chr5:157747715..157747717, + |
| 2.55e-98 | FFCP PHASE2:Hg19::chr18:4003453..4003457,+#_6fbdaad8df0179f0e4a04d7beff8b8eb | p@chr18:4003453..4003457, + |
| 2.55e-98 | FFCP PHASE2:Hg19::chr2:103287330..103287331,+#_6fbdaad8df0179f0e4a04d7beff8b8eb | p@chr2:103287330..103287331, + |
| 2.55e-98 | FFCP PHASE1:Hg19::chr6:70647888..70647891,+#_6fbdaad8df0179f0e4a04d7beff8b8eb | p@chr6:70647888..70647891, + |
| 2.55e-98 | FFCP PHASE1:Hg19::chr18:4003453..4003457,+#_6fbdaad8df0179f0e4a04d7beff8b8eb | p@chr18:4003453..4003457, + |
| 2.55e-98 | FFCP PHASE1:Hg19::chr2:103287330..103287331,+#_6fbdaad8df0179f0e4a04d7beff8b8eb | p@chr2:103287330..103287331, + |
| 2.55e-98 | FFCP PHASE1:Hg19::chr6:104898467..104898469,-#_6fbdaad8df0179f0e4a04d7beff8b8eb | p@chr6:104898467..104898469, - |
| 2.55e-98 | FFCP PHASE2:Hg19::chrX:136514398..136514433,-#_6fbdaad8df0179f0e4a04d7beff8b8eb | p@chrX:136514398..136514433, - |
| 2.55e-98 | FFCP PHASE1:Hg19::chr8:24530708..24530710,+#_6fbdaad8df0179f0e4a04d7beff8b8eb | p@chr8:24530708..24530710, + |
| 2.55e-98 | FFCP PHASE2:Hg19::chr18:39821929..39821932,+#_6fbdaad8df0179f0e4a04d7beff8b8eb | p@chr18:39821929..39821932, + |
| 2.55e-98 | FFCP PHASE2:Hg19::chr14:68375236..68375240,+#_6fbdaad8df0179f0e4a04d7beff8b8eb | p9@RAD51B |
| 1.23e-66 | FFCP PHASE1:Hg19::chr2:218844837..218844842,-#_244780f16b741fea1515548cdffa06f7 | p@chr2:218844837..218844842, - |
| 1.23e-66 | FFCP PHASE2:Hg19::chr2:218844837..218844842,-#_244780f16b741fea1515548cdffa06f7 | p@chr2:218844837..218844842, - |
| 1.23e-66 | FFCP PHASE1:Hg19::chr19:35531882..35531893,-#_244780f16b741fea1515548cdffa06f7 | p@chr19:35531882..35531893, - |
| 1.23e-66 | FFCP PHASE1:Hg19::chr16:10783399..10783401,+#_244780f16b741fea1515548cdffa06f7 | p@chr16:10783399..10783401, + |
| 1.23e-66 | FFCP PHASE2:Hg19::chr17:77026478..77026512,+#_244780f16b741fea1515548cdffa06f7 | p@chr17:77026478..77026512, + |
| 1.23e-66 | FFCP PHASE2:Hg19::chr14:30786806..30786810,-#_244780f16b741fea1515548cdffa06f7 | p@chr14:30786806..30786810, - |
| 1.23e-66 | FFCP PHASE2:Hg19::chr2:123518588..123518591,+#_244780f16b741fea1515548cdffa06f7 | p@chr2:123518588..123518591, + |
| 1.23e-66 | FFCP PHASE1:Hg19::chr17:77026478..77026512,+#_244780f16b741fea1515548cdffa06f7 | p@chr17:77026478..77026512, + |
| 1.23e-66 | FFCP PHASE1:Hg19::chr2:123518588..123518591,+#_244780f16b741fea1515548cdffa06f7 | p@chr2:123518588..123518591, + |
| 1.23e-66 | FFCP PHASE2:Hg19::chr5:99385820..99385831,-#_244780f16b741fea1515548cdffa06f7 | p@chr5:99385820..99385831, - |
| 1.23e-66 | FFCP PHASE2:Hg19::chr16:10783399..10783401,+#_244780f16b741fea1515548cdffa06f7 | p@chr16:10783399..10783401, + |
| 1.23e-66 | FFCP PHASE2:Hg19::chr2:26508626..26508627,+#_244780f16b741fea1515548cdffa06f7 | p@chr2:26508626..26508627, + |
| 1.23e-66 | FFCP PHASE1:Hg19::chr2:26508626..26508627,+#_244780f16b741fea1515548cdffa06f7 | p@chr2:26508626..26508627, + |
| 1.23e-66 | FFCP PHASE1:Hg19::chr5:99385820..99385831,-#_244780f16b741fea1515548cdffa06f7 | p@chr5:99385820..99385831, - |
| 1.23e-66 | FFCP PHASE1:Hg19::chr14:30786806..30786810,-#_244780f16b741fea1515548cdffa06f7 | p@chr14:30786806..30786810, - |
| 1.23e-66 | FFCP PHASE2:Hg19::chr19:35531882..35531893,-#_244780f16b741fea1515548cdffa06f7 | p@chr19:35531882..35531893, - |
| 2.39e-66 | FFCP PHASE1:Hg19::chr1:1154360..1154365,-#_428123a277504716f30ee79fb7ff84c9 | p@chr1:1154360..1154365, - |
| 2.39e-66 | FFCP PHASE1:Hg19::chr5:150006500..150006508,-#_428123a277504716f30ee79fb7ff84c9 | p@chr5:150006500..150006508, - |
| 2.39e-66 | FFCP PHASE2:Hg19::chr8:127508635..127508640,+#_428123a277504716f30ee79fb7ff84c9 | p@chr8:127508635..127508640, + |
| 2.39e-66 | FFCP PHASE2:Hg19::chr1:189481131..189481134,-#_428123a277504716f30ee79fb7ff84c9 | p@chr1:189481131..189481134, - |
| 2.39e-66 | FFCP PHASE2:Hg19::chr6:104465140..104465144,-#_428123a277504716f30ee79fb7ff84c9 | p@chr6:104465140..104465144, - |
| 2.39e-66 | FFCP PHASE2:Hg19::chr1:1154830..1154841,-#_428123a277504716f30ee79fb7ff84c9 | p@chr1:1154830..1154841, - |
| 2.39e-66 | FFCP PHASE2:Hg19::chr5:175084679..175084689,+#_428123a277504716f30ee79fb7ff84c9 | p4@HRH2 |
| 2.39e-66 | FFCP PHASE1:Hg19::chr1:189481131..189481134,-#_428123a277504716f30ee79fb7ff84c9 | p@chr1:189481131..189481134, - |
| 2.39e-66 | FFCP PHASE1:Hg19::chr1:1154830..1154841,-#_428123a277504716f30ee79fb7ff84c9 | p@chr1:1154830..1154841, - |
| 2.39e-66 | FFCP PHASE2:Hg19::chr3:135043585..135043591,-#_428123a277504716f30ee79fb7ff84c9 | p@chr3:135043585..135043591, - |
| 2.39e-66 | FFCP PHASE2:Hg19::chr19:44414731..44414733,+#_428123a277504716f30ee79fb7ff84c9 | p@chr19:44414731..44414733, + |
| 2.39e-66 | FFCP PHASE2:Hg19::chr19:7795730..7795740,-#_428123a277504716f30ee79fb7ff84c9 | p5@CLEC4G |
| 2.39e-66 | FFCP PHASE2:Hg19::chr7:54897467..54897468,-#_428123a277504716f30ee79fb7ff84c9 | p@chr7:54897467..54897468, - |
| 2.39e-66 | FFCP PHASE1:Hg19::chr19:44414731..44414733,+#_428123a277504716f30ee79fb7ff84c9 | p@chr19:44414731..44414733, + |
| 2.39e-66 | FFCP PHASE1:Hg19::chr8:127508635..127508640,+#_428123a277504716f30ee79fb7ff84c9 | p@chr8:127508635..127508640, + |
| 2.39e-66 | FFCP PHASE1:Hg19::chr3:135043585..135043591,-#_428123a277504716f30ee79fb7ff84c9 | p@chr3:135043585..135043591, - |
| 2.39e-66 | FFCP PHASE2:Hg19::chr10:54464025..54464030,+#_428123a277504716f30ee79fb7ff84c9 | p@chr10:54464025..54464030, + |
| 2.39e-66 | FFCP PHASE2:Hg19::chr10:63204408..63204412,-#_428123a277504716f30ee79fb7ff84c9 | p@chr10:63204408..63204412, - |
| 2.39e-66 | FFCP PHASE1:Hg19::chr19:7795730..7795740,-#_428123a277504716f30ee79fb7ff84c9 | p5@CLEC4G |
| 2.39e-66 | FFCP PHASE1:Hg19::chr13:56591781..56591785,-#_428123a277504716f30ee79fb7ff84c9 | p@chr13:56591781..56591785, - |
| 2.39e-66 | FFCP PHASE1:Hg19::chr6:104465140..104465144,-#_428123a277504716f30ee79fb7ff84c9 | p@chr6:104465140..104465144, - |
| 2.39e-66 | FFCP PHASE2:Hg19::chr5:150006500..150006508,-#_428123a277504716f30ee79fb7ff84c9 | p@chr5:150006500..150006508, - |
| 2.39e-66 | FFCP PHASE1:Hg19::chr5:175084679..175084689,+#_428123a277504716f30ee79fb7ff84c9 | p4@HRH2 |
| 2.39e-66 | FFCP PHASE2:Hg19::chr2:42043637..42043640,-#_428123a277504716f30ee79fb7ff84c9 | p@chr2:42043637..42043640, - |
| 2.39e-66 | FFCP PHASE2:Hg19::chr1:203150041..203150049,-#_428123a277504716f30ee79fb7ff84c9 | p@chr1:203150041..203150049, - |
| 2.39e-66 | FFCP PHASE2:Hg19::chr18:40200823..40200829,+#_428123a277504716f30ee79fb7ff84c9 | p@chr18:40200823..40200829, + |
| 2.39e-66 | FFCP PHASE1:Hg19::chr10:54464025..54464030,+#_428123a277504716f30ee79fb7ff84c9 | p@chr10:54464025..54464030, + |
| 2.39e-66 | FFCP PHASE1:Hg19::chr2:42043637..42043640,-#_428123a277504716f30ee79fb7ff84c9 | p@chr2:42043637..42043640, - |
| 2.39e-66 | FFCP PHASE2:Hg19::chr2:238859791..238859796,-#_428123a277504716f30ee79fb7ff84c9 | p@chr2:238859791..238859796, - |
| 2.39e-66 | FFCP PHASE2:Hg19::chr13:56591781..56591785,-#_428123a277504716f30ee79fb7ff84c9 | p@chr13:56591781..56591785, - |
| 2.39e-66 | FFCP PHASE1:Hg19::chr7:54897467..54897468,-#_428123a277504716f30ee79fb7ff84c9 | p@chr7:54897467..54897468, - |
| 2.39e-66 | FFCP PHASE1:Hg19::chr1:203150041..203150049,-#_428123a277504716f30ee79fb7ff84c9 | p@chr1:203150041..203150049, - |
| 2.39e-66 | FFCP PHASE2:Hg19::chr1:1154360..1154365,-#_428123a277504716f30ee79fb7ff84c9 | p@chr1:1154360..1154365, - |
| 2.39e-66 | FFCP PHASE1:Hg19::chr10:63204408..63204412,-#_428123a277504716f30ee79fb7ff84c9 | p@chr10:63204408..63204412, - |
| 2.39e-66 | FFCP PHASE1:Hg19::chr18:40200823..40200829,+#_428123a277504716f30ee79fb7ff84c9 | p@chr18:40200823..40200829, + |
| 2.39e-66 | FFCP PHASE1:Hg19::chr2:238859791..238859796,-#_428123a277504716f30ee79fb7ff84c9 | p@chr2:238859791..238859796, - |
| 4.66e-66 | FFCP PHASE1:Hg19::chr13:25345488..25345491,+#_2d5f0e93669c3a17fc9c33aa178f2044 | p@chr13:25345488..25345491, + |
| 4.66e-66 | FFCP PHASE1:Hg19::chr3:39233987..39233993,-#_2d5f0e93669c3a17fc9c33aa178f2044 | p14@XIRP1 |
| 4.66e-66 | FFCP PHASE1:Hg19::chr1:11905799..11905806,-#_2d5f0e93669c3a17fc9c33aa178f2044 | p@chr1:11905799..11905806, - |
| 4.66e-66 | FFCP PHASE2:Hg19::chr21:40459334..40459341,+#_2d5f0e93669c3a17fc9c33aa178f2044 | p@chr21:40459334..40459341, + |
| 4.66e-66 | FFCP PHASE1:Hg19::chr4:88042092..88042099,-#_2d5f0e93669c3a17fc9c33aa178f2044 | p@chr4:88042092..88042099, - |
| 4.66e-66 | FFCP PHASE1:Hg19::chr10:37485037..37485044,+#_2d5f0e93669c3a17fc9c33aa178f2044 | p@chr10:37485037..37485044, + |
| 4.66e-66 | FFCP PHASE1:Hg19::chr21:40459334..40459341,+#_2d5f0e93669c3a17fc9c33aa178f2044 | p@chr21:40459334..40459341, + |
| 4.66e-66 | FFCP PHASE1:Hg19::chr8:135501299..135501346,-#_2d5f0e93669c3a17fc9c33aa178f2044 | p@chr8:135501299..135501346, - |
| 4.66e-66 | FFCP PHASE2:Hg19::chr13:25345488..25345491,+#_2d5f0e93669c3a17fc9c33aa178f2044 | p@chr13:25345488..25345491, + |
| 4.66e-66 | FFCP PHASE2:Hg19::chr1:11907265..11907271,-#_2d5f0e93669c3a17fc9c33aa178f2044 | p9@NPPA |
| 4.66e-66 | FFCP PHASE2:Hg19::chr9:86211495..86211499,-#_2d5f0e93669c3a17fc9c33aa178f2044 | p1@ENST00000362613 |
| 4.66e-66 | FFCP PHASE1:Hg19::chr1:11907265..11907271,-#_2d5f0e93669c3a17fc9c33aa178f2044 | p9@NPPA |
| 4.66e-66 | FFCP PHASE2:Hg19::chr4:88042092..88042099,-#_2d5f0e93669c3a17fc9c33aa178f2044 | p@chr4:88042092..88042099, - |
| 4.66e-66 | FFCP PHASE2:Hg19::chr10:37485037..37485044,+#_2d5f0e93669c3a17fc9c33aa178f2044 | p@chr10:37485037..37485044, + |
| 4.66e-66 | FFCP PHASE2:Hg19::chr2:16526810..16526812,-#_2d5f0e93669c3a17fc9c33aa178f2044 | p@chr2:16526810..16526812, - |
| 4.66e-66 | FFCP PHASE2:Hg19::chr8:135501299..135501346,-#_2d5f0e93669c3a17fc9c33aa178f2044 | p@chr8:135501299..135501346, - |
| 4.66e-66 | FFCP PHASE2:Hg19::chr3:39233987..39233993,-#_2d5f0e93669c3a17fc9c33aa178f2044 | p14@XIRP1 |
| 4.66e-66 | FFCP PHASE1:Hg19::chr9:86211495..86211499,-#_2d5f0e93669c3a17fc9c33aa178f2044 | p1@ENST00000362613 |
