UBERON:0006555: Difference between revisions
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{{UBERON | {{UBERON | ||
| | |alt_id= | ||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
| | |def= | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|disjoint_from= | |||
|has_quality= | |has_quality= | ||
|id=UBERON:0006555 | |||
|is_a=UBERON:0000025 ;;UBERON:0006554 | |||
|is_obsolete= | |||
|located_in= | |located_in= | ||
|part_of= | |name=excretory tube | ||
|namespace=FANTOM | |||
|obo_creation_date= | |||
|part_of=UBERON:0001008 | |||
|preceded_by= | |||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
| | |subset= | ||
| | |synonym= | ||
|union_of= | |||
|xref= | |||
}} | }} | ||
Latest revision as of 17:57, 12 September 2014
| Name: | excretory tube |
|---|---|
| Namespace: | FANTOM |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0000025(tube),UBERON:0006554(urinary system structure) |
|---|---|
| part_of: | UBERON:0001008(renal system) |
Children
| is a: | UBERON:0000056 (ureter),UBERON:0000083 (mesonephric tubule),UBERON:0006553 (renal duct),UBERON:0007684 (uriniferous tubule),UBERON:0009773 (renal tubule),UBERON:0010532 (primitive nephron) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10290-104G2
- 10318-105A3
- 10346-105D4
- 11514-119H2 (Renal Glomerular Endothelial Cells, donor1)
- 11515-119H3 (Renal Proximal Tubular Epithelial Cell, donor1)
- 11516-119H4 (Renal Cortical Epithelial Cells, donor1)
- 11517-119H5 (Renal Epithelial Cells, donor1)
- 11518-119H6 (Renal Mesangial Cells, donor1)
- 11590-120G6 (Alveolar Epithelial Cells, donor2)
- 11594-120H1 (Renal Glomerular Endothelial Cells, donor2)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0006555 (excretory tube), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 7.12e-98 | FFCP PHASE2:Hg19::chr2:693380..693398,+#_e3592ada75472de93964bc8b01718aa4 | p@chr2:693380..693398, + |
| 7.12e-98 | FFCP PHASE1:Hg19::chr2:693380..693398,+#_e3592ada75472de93964bc8b01718aa4 | p@chr2:693380..693398, + |
| 1.58e-86 | FFCP PHASE1:Mm9::chr18:44264202..44264213,+#_3b2bf352079d1a022ce1c9522b9b5110 | p4@Spink12 |
| 1.58e-86 | FFCP PHASE2:Mm9::chr18:44264202..44264213,+#_3b2bf352079d1a022ce1c9522b9b5110 | p4@Spink12 |
| 2.81e-78 | FFCP PHASE2:Hg19::chr15:66420804..66420837,-#_625bd56ad734e385381b843cd2fe98ca | p4@MEGF11 |
| 2.81e-78 | FFCP PHASE1:Hg19::chr15:66420804..66420837,-#_625bd56ad734e385381b843cd2fe98ca | p4@MEGF11 |
| 1.04e-71 | FFCP PHASE1:Hg19::chr10:102495147..102495159,+#_15c0338b883399fdbd8f506c24c999cd | p4@PAX2 |
| 1.04e-71 | FFCP PHASE2:Hg19::chr10:102495147..102495159,+#_15c0338b883399fdbd8f506c24c999cd | p4@PAX2 |
| 1.28e-69 | FFCP PHASE1:Hg19::chr7:27219833..27219845,-#_5ac4ac0a461e2936ec059f1e2e5ba1e5 | p7@HOXA10 |
| 1.28e-69 | FFCP PHASE2:Hg19::chr7:27219833..27219845,-#_5ac4ac0a461e2936ec059f1e2e5ba1e5 | p7@HOXA10 |
| 4.01e-67 | FFCP PHASE2:Hg19::chr10:102505954..102505973,+#_e980f55b99064a2466be6bc8d5320394 | p3@PAX2 |
| 4.01e-67 | FFCP PHASE1:Hg19::chr10:102505954..102505973,+#_e980f55b99064a2466be6bc8d5320394 | p3@PAX2 |
| 1.1e-61 | FFCP PHASE1:Hg19::chr1:1100457..1100470,+#_87bca8656149280ac9f661fa29378448 | p@chr1:1100457..1100470, + |
| 1.1e-61 | FFCP PHASE2:Hg19::chr1:1100457..1100470,+#_87bca8656149280ac9f661fa29378448 | p@chr1:1100457..1100470, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr11:96150839..96150842,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr11:96150839..96150842, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr1:87922962..87922982,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr1:87922962..87922982, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr4:134913640..134913649,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr4:134913640..134913649, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chrX:12571771..12571780,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chrX:12571771..12571780, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr14:63611303..63611312,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr14:63611303..63611312, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr17:73221016..73221031,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr17:73221016..73221031, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr5:31379878..31379883,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr5:31379878..31379883, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr8:19141482..19141496,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr8:19141482..19141496, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr3:65253465..65253475,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr3:65253465..65253475, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr12:110131610..110131621,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p11@Wars |
| 3.28e-58 | FFCP PHASE2:Mm9::chrX:75798157..75798162,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chrX:75798157..75798162, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr2:25678985..25679033,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr2:25678985..25679033, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr8:91107095..91107103,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr8:91107095..91107103, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chrX:50280152..50280179,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chrX:50280152..50280179, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr13:21378968..21378988,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr13:21378968..21378988, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr2:148676901..148676906,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p8@9230104L09Rik |
| 3.28e-58 | FFCP PHASE1:Mm9::chr5:35930706..35930717,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr5:35930706..35930717, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr13:21379430..21379437,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr13:21379430..21379437, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr6:54359310..54359337,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr6:54359310..54359337, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr13:21383212..21383225,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr13:21383212..21383225, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr14:66521865..66521876,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr14:66521865..66521876, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr5:75559819..75559830,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr5:75559819..75559830, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr13:23683348..23683398,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr13:23683348..23683398, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr2:75866210..75866235,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr2:75866210..75866235, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr2:164479340..164479350,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr2:164479340..164479350, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr17:24670830..24670845,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr17:24670830..24670845, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr5:110773731..110773753,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr5:110773731..110773753, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr2:158083973..158083982,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p3@Bpi |
| 3.28e-58 | FFCP PHASE1:Mm9::chr16:28323634..28323657,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr16:28323634..28323657, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr1:168436322..168436326,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr1:168436322..168436326, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr8:96014490..96014496,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr8:96014490..96014496, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr18:44319583..44319592,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr18:44319583..44319592, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr11:63779573..63779582,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr11:63779573..63779582, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr13:21378774..21378782,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr13:21378774..21378782, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr11:101959194..101959224,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr11:101959194..101959224, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr2:152302768..152302774,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p4@Defb20 |
| 3.28e-58 | FFCP PHASE1:Mm9::chrX:75798097..75798101,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chrX:75798097..75798101, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr9:42151966..42151976,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p9@Tecta |
| 3.28e-58 | FFCP PHASE2:Mm9::chrX:20419453..20419476,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chrX:20419453..20419476, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr8:113585714..113585722,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr8:113585714..113585722, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr13:21379306..21379315,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr13:21379306..21379315, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr9:35651788..35651804,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p1@9230110F15Rik |
| 3.28e-58 | FFCP PHASE2:Mm9::chr2:172632171..172632178,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr2:172632171..172632178, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr2:167480413..167480463,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr2:167480413..167480463, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr3:107731917..107731926,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr3:107731917..107731926, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr2:25349414..25349424,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p5@Lcn12 |
| 3.28e-58 | FFCP PHASE2:Mm9::chr2:164439019..164439029,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p1@Wfdc6b |
| 3.28e-58 | FFCP PHASE1:Mm9::chr9:26704579..26704582,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr9:26704579..26704582, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr6:118298429..118298448,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr6:118298429..118298448, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr1:90155951..90155962,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr1:90155951..90155962, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr17:14306714..14306740,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr17:14306714..14306740, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr8:23045782..23045791,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr8:23045782..23045791, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr2:148676859..148676866,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p5@9230104L09Rik |
| 3.28e-58 | FFCP PHASE1:Mm9::chr1:155697874..155697885,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr1:155697874..155697885, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr3:103650758..103650778,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr3:103650758..103650778, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr10:127470322..127470326,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr10:127470322..127470326, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr9:35657485..35657490,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p3@Gm3428 |
| 3.28e-58 | FFCP PHASE2:Mm9::chr16:43230846..43230884,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr16:43230846..43230884, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr4:40010825..40010844,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr4:40010825..40010844, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr10:56515486..56515496,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr10:56515486..56515496, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr8:113585714..113585722,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr8:113585714..113585722, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr2:152302739..152302742,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p5@Defb20 |
| 3.28e-58 | FFCP PHASE1:Mm9::chr11:98567868..98567884,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p5@Med24 |
| 3.28e-58 | FFCP PHASE1:Mm9::chr11:101958855..101958871,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr11:101958855..101958871, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr18:74784728..74784738,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr18:74784728..74784738, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr9:26688157..26688159,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr9:26688157..26688159, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chrX:130496286..130496293,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chrX:130496286..130496293, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr14:52542661..52542668,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p3@Rnase13 |
| 3.28e-58 | FFCP PHASE2:Mm9::chr14:103746280..103746298,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr14:103746280..103746298, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr5:77645280..77645295,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr5:77645280..77645295, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr1:89597660..89597668,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr1:89597660..89597668, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr1:89597725..89597743,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr1:89597725..89597743, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chrX:130496372..130496393,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chrX:130496372..130496393, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr13:23683348..23683398,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr13:23683348..23683398, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr12:114385720..114385732,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr12:114385720..114385732, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr16:25752228..25752237,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr16:25752228..25752237, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr9:65941913..65941923,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr9:65941913..65941923, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr9:34813361..34813403,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr9:34813361..34813403, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chrX:20219008..20219045,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chrX:20219008..20219045, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr2:160573065..160573077,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr2:160573065..160573077, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr9:35585507..35585517,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p4@Gm17727 |
| 3.28e-58 | FFCP PHASE2:Mm9::chr14:51627616..51627623,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p2@Rnase10 |
| 3.28e-58 | FFCP PHASE1:Mm9::chr1:168436322..168436326,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr1:168436322..168436326, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr14:51677141..51677148,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p7@Rnase12 |
| 3.28e-58 | FFCP PHASE1:Mm9::chr13:21378927..21378932,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr13:21378927..21378932, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chrX:103276578..103276585,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chrX:103276578..103276585, + |
