UBERON:0007497: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{UBERON
|id=UBERON:0007497
|name=developing epithelial placode
|namespace=
|def="A domain of columnar epithelium in an embryo that represents the early stage of the devel...") |
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{{UBERON | {{UBERON | ||
| | |alt_id=EHDAA2:0003112 | ||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
| | |def="A domain of columnar epithelium in an embryo that represents the early stage of the development of the epithelial component of a new anatomical structure." [JB:DEF] | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|disjoint_from= | |||
|has_quality= | |has_quality= | ||
|id=UBERON:0007497 | |||
|is_a=UBERON:0000485 ;;UBERON:0001048 | |||
|is_obsolete= | |||
|located_in= | |located_in= | ||
|name=developing epithelial placode | |||
|namespace=FANTOM | |||
|obo_creation_date= | |||
|part_of= | |part_of= | ||
|preceded_by= | |||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
|subset= | |||
|synonym="epithelial placode" EXACT [AEO:0000112] | |||
|union_of= | |||
|xref=AEO:0000112;;AEO:0000218;;EHDAA2:0003112 | |||
}} | }} | ||
Latest revision as of 18:01, 12 September 2014
| Name: | developing epithelial placode | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "A domain of columnar epithelium in an embryo that represents the early stage of the development of the epithelial component of a new anatomical structure." [JB:DEF] | ||
| Xrefs: |
| ||
| Synonyms: | "epithelial placode" EXACT [AEO:0000112] | ||
| Alt_id: | EHDAA2:0003112 |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0000485(simple columnar epithelium),UBERON:0001048(primordium) |
|---|
Children
| is a: | UBERON:0001049 (neural tube),UBERON:0003050 (olfactory placode),UBERON:0003051 (ear vesicle),UBERON:0003071 (eye primordium),UBERON:0003075 (neural plate),UBERON:0003894 (liver primordium),UBERON:0004209 (renal vesicle),UBERON:0005081 (ureter ureteric bud),UBERON:0010532 (primitive nephron) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0007497 (developing epithelial placode), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 1.55e-98 | FFCP PHASE2:Hg19::chr6:21648948..21648949,+#_bb89b382ec01bf7b8e5f3f2edd211187 | p@chr6:21648948..21648949, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr4:70707713..70707716,-#_bb89b382ec01bf7b8e5f3f2edd211187 | p@chr4:70707713..70707716, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr6:21648948..21648949,+#_bb89b382ec01bf7b8e5f3f2edd211187 | p@chr6:21648948..21648949, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr8:90366581..90366594,-#_bb89b382ec01bf7b8e5f3f2edd211187 | p@chr8:90366581..90366594, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr4:70707713..70707716,-#_bb89b382ec01bf7b8e5f3f2edd211187 | p@chr4:70707713..70707716, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr8:90366581..90366594,-#_bb89b382ec01bf7b8e5f3f2edd211187 | p@chr8:90366581..90366594, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr10:80806047..80806059,-#_43170746cb22dd0005a9ffd1c223da97 | p4@Gipc3 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr2:152453066..152453075,-#_43170746cb22dd0005a9ffd1c223da97 | p@chr2:152453066..152453075, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr3:81012915..81012923,+#_43170746cb22dd0005a9ffd1c223da97 | p@chr3:81012915..81012923, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr17:13983198..13983203,+#_43170746cb22dd0005a9ffd1c223da97 | p@chr17:13983198..13983203, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr12:13508046..13508055,+#_43170746cb22dd0005a9ffd1c223da97 | p@chr12:13508046..13508055, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr15:12848147..12848162,+#_43170746cb22dd0005a9ffd1c223da97 | p@chr15:12848147..12848162, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr13:48087761..48087775,-#_43170746cb22dd0005a9ffd1c223da97 | p@chr13:48087761..48087775, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr9:42206784..42206793,-#_43170746cb22dd0005a9ffd1c223da97 | p@chr9:42206784..42206793, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr19:55255289..55255299,+#_43170746cb22dd0005a9ffd1c223da97 | p2@Tectb |
| 1.87e-86 | FFCP PHASE2:Mm9::chr5:21371424..21371435,-#_43170746cb22dd0005a9ffd1c223da97 | p2@Slc26a5 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr6:86745686..86745727,-#_43170746cb22dd0005a9ffd1c223da97 | p@chr6:86745686..86745727, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr11:4689776..4689785,-#_43170746cb22dd0005a9ffd1c223da97 | p@chr11:4689776..4689785, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr10:107349418..107349423,-#_43170746cb22dd0005a9ffd1c223da97 | p5@Otogl |
| 1.87e-86 | FFCP PHASE2:Mm9::chr11:120222470..120222516,+#_43170746cb22dd0005a9ffd1c223da97 | p2@Fscn2 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr3:69811590..69811601,+#_43170746cb22dd0005a9ffd1c223da97 | p1@Otol1 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr2:29935952..29935993,+#_43170746cb22dd0005a9ffd1c223da97 | p7@Pkn3 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr16:96494788..96494801,+#_43170746cb22dd0005a9ffd1c223da97 | p12@B3galt5 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr4:63079735..63079745,-#_43170746cb22dd0005a9ffd1c223da97 | p@chr4:63079735..63079745, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr10:107349430..107349440,-#_43170746cb22dd0005a9ffd1c223da97 | p3@Otogl |
| 1.87e-86 | FFCP PHASE1:Mm9::chr9:42207998..42208009,-#_43170746cb22dd0005a9ffd1c223da97 | p6@Tecta |
| 1.87e-86 | FFCP PHASE1:Mm9::chr1:94627290..94627299,-#_43170746cb22dd0005a9ffd1c223da97 | p@chr1:94627290..94627299, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr1:93235228..93235249,+#_43170746cb22dd0005a9ffd1c223da97 | p@chr1:93235228..93235249, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr15:12848147..12848162,+#_43170746cb22dd0005a9ffd1c223da97 | p@chr15:12848147..12848162, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr14:47293496..47293510,-#_43170746cb22dd0005a9ffd1c223da97 | p@chr14:47293496..47293510, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr9:92087926..92087938,+#_43170746cb22dd0005a9ffd1c223da97 | p2@Plscr5 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr2:152453066..152453075,-#_43170746cb22dd0005a9ffd1c223da97 | p@chr2:152453066..152453075, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr13:78257518..78257522,+#_43170746cb22dd0005a9ffd1c223da97 | p@chr13:78257518..78257522, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr1:16651649..16651655,+#_43170746cb22dd0005a9ffd1c223da97 | p@chr1:16651649..16651655, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr5:28035962..28035983,+#_43170746cb22dd0005a9ffd1c223da97 | p@chr5:28035962..28035983, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr1:172843847..172843880,-#_43170746cb22dd0005a9ffd1c223da97 | p@chr1:172843847..172843880, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr7:109265277..109265288,-#_43170746cb22dd0005a9ffd1c223da97 | p4@Chrna10 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr2:29935952..29935993,+#_43170746cb22dd0005a9ffd1c223da97 | p7@Pkn3 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr19:21028739..21028785,-#_43170746cb22dd0005a9ffd1c223da97 | p1@Tmc1 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr9:42207397..42207408,-#_43170746cb22dd0005a9ffd1c223da97 | p@chr9:42207397..42207408, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr1:78523144..78523177,+#_43170746cb22dd0005a9ffd1c223da97 | p@chr1:78523144..78523177, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr8:13414266..13414279,+#_43170746cb22dd0005a9ffd1c223da97 | p@chr8:13414266..13414279, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr2:53464168..53464175,+#_43170746cb22dd0005a9ffd1c223da97 | p@chr2:53464168..53464175, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr11:89702580..89702593,-#_43170746cb22dd0005a9ffd1c223da97 | p@chr11:89702580..89702593, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr14:102297728..102297742,+#_43170746cb22dd0005a9ffd1c223da97 | p@chr14:102297728..102297742, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr3:154459246..154459253,+#_43170746cb22dd0005a9ffd1c223da97 | p@chr3:154459246..154459253, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr11:8405038..8405048,-#_43170746cb22dd0005a9ffd1c223da97 | p@chr11:8405038..8405048, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr11:89702580..89702593,-#_43170746cb22dd0005a9ffd1c223da97 | p@chr11:89702580..89702593, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr6:29428397..29428407,-#_43170746cb22dd0005a9ffd1c223da97 | p@chr6:29428397..29428407, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr10:97109753..97109764,+#_43170746cb22dd0005a9ffd1c223da97 | p3@Epyc |
| 1.87e-86 | FFCP PHASE2:Mm9::chr17:31335953..31335957,-#_43170746cb22dd0005a9ffd1c223da97 | p3@Tmprss3 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr2:121206667..121206674,-#_43170746cb22dd0005a9ffd1c223da97 | p2@Strc |
| 1.87e-86 | FFCP PHASE1:Mm9::chr2:121206695..121206711,-#_43170746cb22dd0005a9ffd1c223da97 | p1@Strc |
| 1.87e-86 | FFCP PHASE1:Mm9::chr15:58022966..58022995,-#_43170746cb22dd0005a9ffd1c223da97 | p@chr15:58022966..58022995, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr9:42207792..42207805,-#_43170746cb22dd0005a9ffd1c223da97 | p11@Tecta |
| 1.87e-86 | FFCP PHASE2:Mm9::chr15:89215306..89215315,+#_43170746cb22dd0005a9ffd1c223da97 | p@chr15:89215306..89215315, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr7:109052262..109052291,-#_43170746cb22dd0005a9ffd1c223da97 | p1@Tomt |
| 1.87e-86 | FFCP PHASE1:Mm9::chr5:3909290..3909299,+#_43170746cb22dd0005a9ffd1c223da97 | p@chr5:3909290..3909299, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr10:67371994..67372010,+#_43170746cb22dd0005a9ffd1c223da97 | p@chr10:67371994..67372010, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr1:172843847..172843880,-#_43170746cb22dd0005a9ffd1c223da97 | p@chr1:172843847..172843880, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr6:113251606..113251613,+#_43170746cb22dd0005a9ffd1c223da97 | p@chr6:113251606..113251613, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr4:130461150..130461185,+#_43170746cb22dd0005a9ffd1c223da97 | p@chr4:130461150..130461185, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr17:13983095..13983100,+#_43170746cb22dd0005a9ffd1c223da97 | p@chr17:13983095..13983100, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr9:66860888..66860899,+#_43170746cb22dd0005a9ffd1c223da97 | p@chr9:66860888..66860899, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr13:43699228..43699239,+#_43170746cb22dd0005a9ffd1c223da97 | p@chr13:43699228..43699239, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr19:55255289..55255299,+#_43170746cb22dd0005a9ffd1c223da97 | p2@Tectb |
| 1.87e-86 | FFCP PHASE2:Mm9::chr12:109905399..109905416,+#_43170746cb22dd0005a9ffd1c223da97 | p@chr12:109905399..109905416, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr15:97806034..97806061,+#_43170746cb22dd0005a9ffd1c223da97 | p@chr15:97806034..97806061, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr4:101908153..101908163,+#_43170746cb22dd0005a9ffd1c223da97 | p@chr4:101908153..101908163, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr16:93971357..93971363,-#_43170746cb22dd0005a9ffd1c223da97 | p@chr16:93971357..93971363, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr11:102123554..102123566,+#_43170746cb22dd0005a9ffd1c223da97 | p4@BC030867 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr5:28035962..28035983,+#_43170746cb22dd0005a9ffd1c223da97 | p@chr5:28035962..28035983, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr9:41495920..41495928,-#_43170746cb22dd0005a9ffd1c223da97 | p@chr9:41495920..41495928, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr2:53464178..53464186,+#_43170746cb22dd0005a9ffd1c223da97 | p@chr2:53464178..53464186, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr10:107349309..107349318,-#_43170746cb22dd0005a9ffd1c223da97 | p4@Otogl |
| 1.87e-86 | FFCP PHASE1:Mm9::chr9:42207852..42207876,-#_43170746cb22dd0005a9ffd1c223da97 | p2@Tecta |
| 1.87e-86 | FFCP PHASE1:Mm9::chr7:29733825..29733837,-#_43170746cb22dd0005a9ffd1c223da97 | p@chr7:29733825..29733837, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr1:93235228..93235249,+#_43170746cb22dd0005a9ffd1c223da97 | p@chr1:93235228..93235249, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr10:97109753..97109764,+#_43170746cb22dd0005a9ffd1c223da97 | p3@Epyc |
| 1.87e-86 | FFCP PHASE2:Mm9::chr17:13983179..13983190,+#_43170746cb22dd0005a9ffd1c223da97 | p@chr17:13983179..13983190, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr6:113251570..113251578,+#_43170746cb22dd0005a9ffd1c223da97 | p@chr6:113251570..113251578, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr15:85334335..85334353,+#_43170746cb22dd0005a9ffd1c223da97 | p@chr15:85334335..85334353, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr13:76964459..76964469,+#_43170746cb22dd0005a9ffd1c223da97 | p15@Mctp1 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr5:150945209..150945220,+#_43170746cb22dd0005a9ffd1c223da97 | p@chr5:150945209..150945220, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr12:109905399..109905416,+#_43170746cb22dd0005a9ffd1c223da97 | p@chr12:109905399..109905416, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr4:101908153..101908163,+#_43170746cb22dd0005a9ffd1c223da97 | p@chr4:101908153..101908163, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr14:31283085..31283097,-#_43170746cb22dd0005a9ffd1c223da97 | p@chr14:31283085..31283097, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr2:73232344..73232356,-#_43170746cb22dd0005a9ffd1c223da97 | p@chr2:73232344..73232356, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr9:42206730..42206739,-#_43170746cb22dd0005a9ffd1c223da97 | p@chr9:42206730..42206739, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr1:63733478..63733491,-#_43170746cb22dd0005a9ffd1c223da97 | p1@Dytn |
| 1.87e-86 | FFCP PHASE1:Mm9::chr19:10536767..10536777,-#_43170746cb22dd0005a9ffd1c223da97 | p@chr19:10536767..10536777, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr13:78322370..78322376,-#_43170746cb22dd0005a9ffd1c223da97 | p4@uc007rhb.1 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr3:154459184..154459195,+#_43170746cb22dd0005a9ffd1c223da97 | p@chr3:154459184..154459195, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr2:67011941..67011951,+#_43170746cb22dd0005a9ffd1c223da97 | p3@Gm1322 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr9:42207983..42207995,-#_43170746cb22dd0005a9ffd1c223da97 | p3@Tecta |
| 1.87e-86 | FFCP PHASE1:Mm9::chr7:109052262..109052291,-#_43170746cb22dd0005a9ffd1c223da97 | p1@Tomt |
| 1.87e-86 | FFCP PHASE2:Mm9::chr2:9811162..9811171,-#_43170746cb22dd0005a9ffd1c223da97 | p2@9230102O04Rik |
| 1.87e-86 | FFCP PHASE1:Mm9::chr3:106986057..106986062,+#_43170746cb22dd0005a9ffd1c223da97 | p1@Kcna10 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr13:58283583..58283607,-#_43170746cb22dd0005a9ffd1c223da97 | p@chr13:58283583..58283607, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr13:43699188..43699216,+#_43170746cb22dd0005a9ffd1c223da97 | p@chr13:43699188..43699216, + |
