UBERON:0010047: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| (One intermediate revision by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{UBERON | {{UBERON | ||
| | |alt_id= | ||
|comment=Note that Kardong classifies lacrimal glands here | |comment=Note that Kardong classifies lacrimal glands here | ||
|created_by= | |created_by= | ||
| | |def="Gland of the epithelium lining the oral cavity. The most common are the salivary glands." [ISBN10:0073040584] | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|disjoint_from= | |||
|has_quality= | |has_quality= | ||
|id=UBERON:0010047 | |||
|is_a=UBERON:0002365 ;;UBERON:0003408 ;;UBERON:0004121 | |||
|is_obsolete= | |||
|located_in= | |located_in= | ||
|name=oral gland | |||
|namespace=FANTOM | |||
|obo_creation_date= | |||
|part_of=UBERON:0000165 | |part_of=UBERON:0000165 | ||
|preceded_by= | |||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
| | |subset= | ||
| | |synonym= | ||
|union_of= | |||
|xref= | |||
}} | }} | ||
Latest revision as of 18:07, 12 September 2014
| Name: | oral gland |
|---|---|
| Namespace: | FANTOM |
| Definition: | "Gland of the epithelium lining the oral cavity. The most common are the salivary glands." [ISBN10:0073040584] |
| Comments: | Note that Kardong classifies lacrimal glands here |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0002365(exocrine gland),UBERON:0003408(gland of gut),UBERON:0004121(ectoderm-derived structure) |
|---|---|
| part_of: | UBERON:0000165(mouth) |
Children
| is a: | UBERON:0001044 (saliva-secreting gland),UBERON:0003293 (gland of oral region) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10093-102C3 (salivary gland, adult, pool1)
- 10199-103F1 (parotid gland, adult)
- 10202-103F4 (submaxillary gland, adult)
- 11771-123I7 (salivary acinar cells, donor1)
- 11772-123I8 (salivary acinar cells, donor2)
- 11773-123I9 (salivary acinar cells, donor3)
- 59-29C1 (submandibular gland, adult)
Mouse (Mus musculus)
- 10093-102C3 (salivary gland, adult, pool1)
- 10199-103F1 (parotid gland, adult)
- 10202-103F4 (submaxillary gland, adult)
- 11771-123I7 (salivary acinar cells, donor1)
- 11772-123I8 (salivary acinar cells, donor2)
- 11773-123I9 (salivary acinar cells, donor3)
- 59-29C1 (submandibular gland, adult)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0010047 (oral gland), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
