Personal tools

UBERON:0010134: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
(Created page with "{{UBERON |id=UBERON:0010134 |name=secretory circumventricular organ |namespace= |def= |xref=MA:0002943 |is_a=UBERON:0005408;;UBERON:0010133 |synonym= |comment= |alt_i...")
 
No edit summary
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{UBERON
{{UBERON
|id=UBERON:0010134
|alt_id=
|name=secretory circumventricular organ
|namespace=
|def=
|xref=MA:0002943
|is_a=UBERON:0005408;;UBERON:0010133
|synonym=
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def=
|subset=
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0010134
|is_a=UBERON:0005408 ;;UBERON:0010133
|is_obsolete=
|located_in=
|located_in=
|part_of=
|name=secretory circumventricular organ
|namespace=FANTOM
|obo_creation_date=
|part_of=UBERON:0000949
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|subset=
|synonym=
|union_of=
|xref=MA:0002943
}}
}}

Latest revision as of 18:08, 12 September 2014

Name:secretory circumventricular organ
Namespace:FANTOM
Xrefs:
links:
MA:0002943

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0005408(circumventricular organ),UBERON:0010133(neuroendocrine gland)
part_of:UBERON:0000949(endocrine system)



Children

is a:UBERON:0001905 (pineal body)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0010134 (secretory circumventricular organ), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data


P-valueFFCPShort description
3.29e-195FFCP PHASE2:Hg19::chr3:139938385..139938390,+#_adb8ee52c4f90da47fe854844baebae7p@chr3:139938385..139938390, +
3.29e-195FFCP PHASE2:Hg19::chr2:17040158..17040170,+#_adb8ee52c4f90da47fe854844baebae7p@chr2:17040158..17040170, +
3.29e-195FFCP PHASE2:Hg19::chr1:154540028..154540037,+#_adb8ee52c4f90da47fe854844baebae7p4@CHRNB2
3.29e-195FFCP PHASE1:Hg19::chr8:87755821..87755822,-#_adb8ee52c4f90da47fe854844baebae7p10@CNGB3
3.29e-195FFCP PHASE1:Hg19::chr5:7338484..7338504,-#_adb8ee52c4f90da47fe854844baebae7p@chr5:7338484..7338504, -
3.29e-195FFCP PHASE2:Hg19::chr7:9178350..9178369,-#_adb8ee52c4f90da47fe854844baebae7p@chr7:9178350..9178369, -
3.29e-195FFCP PHASE2:Hg19::chr7:36878535..36878540,+#_adb8ee52c4f90da47fe854844baebae7p4@ENST00000439998
3.29e-195FFCP PHASE1:Hg19::chr5:119799539..119799543,+#_adb8ee52c4f90da47fe854844baebae7p13@PRR16
3.29e-195FFCP PHASE1:Hg19::chr10:18580269..18580290,+#_adb8ee52c4f90da47fe854844baebae7p@chr10:18580269..18580290, +
3.29e-195FFCP PHASE1:Hg19::chr6:158734173..158734183,+#_adb8ee52c4f90da47fe854844baebae7p7@TULP4
3.29e-195FFCP PHASE1:Hg19::chr20:44991864..44991887,-#_adb8ee52c4f90da47fe854844baebae7p10@SLC35C2
3.29e-195FFCP PHASE2:Hg19::chr2:108604491..108604499,+#_adb8ee52c4f90da47fe854844baebae7p8@SLC5A7
3.29e-195FFCP PHASE1:Hg19::chr8:135473748..135473753,-#_adb8ee52c4f90da47fe854844baebae7p@chr8:135473748..135473753, -
3.29e-195FFCP PHASE1:Hg19::chr2:216447404..216447411,-#_adb8ee52c4f90da47fe854844baebae7p1@ENST00000457625
3.29e-195FFCP PHASE2:Hg19::chr12:15134610..15134617,+#_adb8ee52c4f90da47fe854844baebae7p@chr12:15134610..15134617, +
3.29e-195FFCP PHASE1:Hg19::chr7:9228468..9228494,-#_adb8ee52c4f90da47fe854844baebae7p@chr7:9228468..9228494, -
3.29e-195FFCP PHASE2:Hg19::chr1:204667243..204667248,+#_adb8ee52c4f90da47fe854844baebae7p@chr1:204667243..204667248, +
3.29e-195FFCP PHASE2:Hg19::chr8:135522475..135522486,-#_adb8ee52c4f90da47fe854844baebae7p16@ZFAT
3.29e-195FFCP PHASE1:Hg19::chr2:108602341..108602352,+#_adb8ee52c4f90da47fe854844baebae7p@chr2:108602341..108602352, +
3.29e-195FFCP PHASE2:Hg19::chr2:4224059..4224062,-#_adb8ee52c4f90da47fe854844baebae7p@chr2:4224059..4224062, -
3.29e-195FFCP PHASE2:Hg19::chr7:120842768..120842790,-#_adb8ee52c4f90da47fe854844baebae7p@chr7:120842768..120842790, -
3.29e-195FFCP PHASE2:Hg19::chr13:56628524..56628547,-#_adb8ee52c4f90da47fe854844baebae7p@chr13:56628524..56628547, -
3.29e-195FFCP PHASE1:Hg19::chr13:52650541..52650548,-#_adb8ee52c4f90da47fe854844baebae7p@chr13:52650541..52650548, -
3.29e-195FFCP PHASE1:Hg19::chr13:56628524..56628547,-#_adb8ee52c4f90da47fe854844baebae7p@chr13:56628524..56628547, -
3.29e-195FFCP PHASE2:Hg19::chr8:135473063..135473075,-#_adb8ee52c4f90da47fe854844baebae7p@chr8:135473063..135473075, -
3.29e-195FFCP PHASE2:Hg19::chr7:129084265..129084288,-#_adb8ee52c4f90da47fe854844baebae7p@chr7:129084265..129084288, -
3.29e-195FFCP PHASE1:Hg19::chr17:74463567..74463574,+#_adb8ee52c4f90da47fe854844baebae7p4@AANAT
3.29e-195FFCP PHASE1:Hg19::chr7:9194488..9194491,-#_adb8ee52c4f90da47fe854844baebae7p@chr7:9194488..9194491, -
3.29e-195FFCP PHASE2:Hg19::chr8:135504353..135504365,-#_adb8ee52c4f90da47fe854844baebae7p@chr8:135504353..135504365, -
3.29e-195FFCP PHASE2:Hg19::chr16:18066399..18066411,-#_adb8ee52c4f90da47fe854844baebae7p@chr16:18066399..18066411, -
3.29e-195FFCP PHASE2:Hg19::chr11:18040537..18040547,-#_adb8ee52c4f90da47fe854844baebae7p@chr11:18040537..18040547, -
3.29e-195FFCP PHASE2:Hg19::chr9:137539895..137539904,+#_adb8ee52c4f90da47fe854844baebae7p@chr9:137539895..137539904, +
3.29e-195FFCP PHASE1:Hg19::chr9:92310419..92310432,+#_adb8ee52c4f90da47fe854844baebae7p@chr9:92310419..92310432, +
3.29e-195FFCP PHASE1:Hg19::chr11:18053180..18053192,-#_adb8ee52c4f90da47fe854844baebae7p@chr11:18053180..18053192, -
3.29e-195FFCP PHASE2:Hg19::chr3:107545606..107545631,-#_adb8ee52c4f90da47fe854844baebae7p@chr3:107545606..107545631, -
3.29e-195FFCP PHASE1:Hg19::chr1:99860753..99860764,-#_adb8ee52c4f90da47fe854844baebae7p@chr1:99860753..99860764, -
3.29e-195FFCP PHASE2:Hg19::chr7:9782665..9782674,+#_adb8ee52c4f90da47fe854844baebae7p@chr7:9782665..9782674, +
3.29e-195FFCP PHASE2:Hg19::chr13:21399081..21399087,+#_adb8ee52c4f90da47fe854844baebae7p@chr13:21399081..21399087, +
3.29e-195FFCP PHASE1:Hg19::chr12:55422293..55422300,+#_adb8ee52c4f90da47fe854844baebae7p@chr12:55422293..55422300, +
3.29e-195FFCP PHASE2:Hg19::chr7:75864329..75864335,+#_adb8ee52c4f90da47fe854844baebae7p11@SRRM3
3.29e-195FFCP PHASE2:Hg19::chr12:81859007..81859036,+#_adb8ee52c4f90da47fe854844baebae7p@chr12:81859007..81859036, +
3.29e-195FFCP PHASE1:Hg19::chr17:55484129..55484139,+#_adb8ee52c4f90da47fe854844baebae7p@chr17:55484129..55484139, +
3.29e-195FFCP PHASE1:Hg19::chr7:32468385..32468392,-#_adb8ee52c4f90da47fe854844baebae7p@chr7:32468385..32468392, -
3.29e-195FFCP PHASE2:Hg19::chr16:17930871..17930877,-#_adb8ee52c4f90da47fe854844baebae7p@chr16:17930871..17930877, -
3.29e-195FFCP PHASE2:Hg19::chr1:57907030..57907050,+#_adb8ee52c4f90da47fe854844baebae7p@chr1:57907030..57907050, +
3.29e-195FFCP PHASE2:Hg19::chr8:87755821..87755822,-#_adb8ee52c4f90da47fe854844baebae7p10@CNGB3
3.29e-195FFCP PHASE1:Hg19::chr16:18066399..18066411,-#_adb8ee52c4f90da47fe854844baebae7p@chr16:18066399..18066411, -
3.29e-195FFCP PHASE1:Hg19::chr8:99033417..99033423,+#_adb8ee52c4f90da47fe854844baebae7p17@MATN2
3.29e-195FFCP PHASE2:Hg19::chr5:119867229..119867240,+#_adb8ee52c4f90da47fe854844baebae7p9@PRR16
3.29e-195FFCP PHASE2:Hg19::chr11:74951707..74951719,+#_adb8ee52c4f90da47fe854844baebae7p9@LOC100507050
3.29e-195FFCP PHASE1:Hg19::chr13:21399081..21399087,+#_adb8ee52c4f90da47fe854844baebae7p@chr13:21399081..21399087, +
3.29e-195FFCP PHASE2:Hg19::chr8:135473748..135473753,-#_adb8ee52c4f90da47fe854844baebae7p@chr8:135473748..135473753, -
3.29e-195FFCP PHASE2:Hg19::chr16:1210506..1210513,-#_adb8ee52c4f90da47fe854844baebae7p@chr16:1210506..1210513, -
3.29e-195FFCP PHASE1:Hg19::chr12:81859007..81859036,+#_adb8ee52c4f90da47fe854844baebae7p@chr12:81859007..81859036, +
3.29e-195FFCP PHASE2:Hg19::chr5:134871183..134871197,-#_adb8ee52c4f90da47fe854844baebae7p3@NEUROG1
3.29e-195FFCP PHASE2:Hg19::chr11:84530787..84530803,+#_adb8ee52c4f90da47fe854844baebae7p@chr11:84530787..84530803, +
3.29e-195FFCP PHASE1:Hg19::chr16:17930871..17930877,-#_adb8ee52c4f90da47fe854844baebae7p@chr16:17930871..17930877, -
3.29e-195FFCP PHASE2:Hg19::chr1:99860786..99860791,-#_adb8ee52c4f90da47fe854844baebae7p@chr1:99860786..99860791, -
3.29e-195FFCP PHASE2:Hg19::chr3:192894646..192894653,-#_adb8ee52c4f90da47fe854844baebae7p2@ENST00000414895
3.29e-195FFCP PHASE1:Hg19::chr1:57975398..57975401,+#_adb8ee52c4f90da47fe854844baebae7p@chr1:57975398..57975401, +
3.29e-195FFCP PHASE1:Hg19::chr2:17185712..17185735,+#_adb8ee52c4f90da47fe854844baebae7p@chr2:17185712..17185735, +
3.29e-195FFCP PHASE2:Hg19::chr4:1188439..1188454,-#_adb8ee52c4f90da47fe854844baebae7p@chr4:1188439..1188454, -
3.29e-195FFCP PHASE2:Hg19::chr12:55422858..55422866,+#_adb8ee52c4f90da47fe854844baebae7p@chr12:55422858..55422866, +
3.29e-195FFCP PHASE1:Hg19::chr18:56963093..56963105,-#_adb8ee52c4f90da47fe854844baebae7p@chr18:56963093..56963105, -
3.29e-195FFCP PHASE1:Hg19::chr16:1210506..1210513,-#_adb8ee52c4f90da47fe854844baebae7p@chr16:1210506..1210513, -
3.29e-195FFCP PHASE1:Hg19::chr3:54952462..54952471,-#_adb8ee52c4f90da47fe854844baebae7p@chr3:54952462..54952471, -
3.29e-195FFCP PHASE2:Hg19::chr11:18041244..18041266,-#_adb8ee52c4f90da47fe854844baebae7p@chr11:18041244..18041266, -
3.29e-195FFCP PHASE1:Hg19::chr1:204620238..204620253,+#_adb8ee52c4f90da47fe854844baebae7p@chr1:204620238..204620253, +
3.29e-195FFCP PHASE2:Hg19::chr13:52650541..52650548,-#_adb8ee52c4f90da47fe854844baebae7p@chr13:52650541..52650548, -
3.29e-195FFCP PHASE1:Hg19::chr12:49621658..49621666,+#_adb8ee52c4f90da47fe854844baebae7p21@TUBA1C
3.29e-195FFCP PHASE1:Hg19::chr11:18067951..18067954,-#_adb8ee52c4f90da47fe854844baebae7p@chr11:18067951..18067954, -
3.29e-195FFCP PHASE2:Hg19::chr9:92310419..92310432,+#_adb8ee52c4f90da47fe854844baebae7p@chr9:92310419..92310432, +
3.29e-195FFCP PHASE2:Hg19::chr8:99033417..99033423,+#_adb8ee52c4f90da47fe854844baebae7p17@MATN2
3.29e-195FFCP PHASE2:Hg19::chr18:56962131..56962138,-#_adb8ee52c4f90da47fe854844baebae7p@chr18:56962131..56962138, -
3.29e-195FFCP PHASE1:Hg19::chr12:56582028..56582062,+#_adb8ee52c4f90da47fe854844baebae7p@chr12:56582028..56582062, +
3.29e-195FFCP PHASE1:Hg19::chr5:135732714..135732721,-#_adb8ee52c4f90da47fe854844baebae7p2@ENST00000514282
3.29e-195FFCP PHASE1:Hg19::chr3:100942376..100942381,-#_adb8ee52c4f90da47fe854844baebae7p@chr3:100942376..100942381, -
3.29e-195FFCP PHASE1:Hg19::chr8:135504405..135504410,-#_adb8ee52c4f90da47fe854844baebae7p@chr8:135504405..135504410, -
3.29e-195FFCP PHASE2:Hg19::chr16:18066319..18066337,-#_adb8ee52c4f90da47fe854844baebae7p@chr16:18066319..18066337, -
3.29e-195FFCP PHASE2:Hg19::chr12:121088132..121088135,+#_adb8ee52c4f90da47fe854844baebae7p15@CABP1
3.29e-195FFCP PHASE1:Hg19::chr10:80984180..80984190,-#_adb8ee52c4f90da47fe854844baebae7p@chr10:80984180..80984190, -
3.29e-195FFCP PHASE1:Hg19::chr12:6954834..6954841,+#_adb8ee52c4f90da47fe854844baebae7p9@GNB3
3.29e-195FFCP PHASE2:Hg19::chr5:136699666..136699696,-#_adb8ee52c4f90da47fe854844baebae7p@chr5:136699666..136699696, -
3.29e-195FFCP PHASE1:Hg19::chr2:17075761..17075773,+#_adb8ee52c4f90da47fe854844baebae7p@chr2:17075761..17075773, +
3.29e-195FFCP PHASE2:Hg19::chr3:54952420..54952425,-#_adb8ee52c4f90da47fe854844baebae7p@chr3:54952420..54952425, -
3.29e-195FFCP PHASE2:Hg19::chr6:33087873..33087886,-#_adb8ee52c4f90da47fe854844baebae7p@chr6:33087873..33087886, -
3.29e-195FFCP PHASE2:Hg19::chr2:17064630..17064651,+#_adb8ee52c4f90da47fe854844baebae7p@chr2:17064630..17064651, +
3.29e-195FFCP PHASE1:Hg19::chr5:136328601..136328607,-#_adb8ee52c4f90da47fe854844baebae7p25@SPOCK1
3.29e-195FFCP PHASE1:Hg19::chr8:87755845..87755852,-#_adb8ee52c4f90da47fe854844baebae7p6@CNGB3
3.29e-195FFCP PHASE1:Hg19::chr4:20985690..20985695,-#_adb8ee52c4f90da47fe854844baebae7p38@KCNIP4
3.29e-195FFCP PHASE2:Hg19::chr12:99734965..99734976,-#_adb8ee52c4f90da47fe854844baebae7p@chr12:99734965..99734976, -
3.29e-195FFCP PHASE1:Hg19::chr16:18066319..18066337,-#_adb8ee52c4f90da47fe854844baebae7p@chr16:18066319..18066337, -
3.29e-195FFCP PHASE1:Hg19::chr11:18041194..18041197,-#_adb8ee52c4f90da47fe854844baebae7p@chr11:18041194..18041197, -
3.29e-195FFCP PHASE1:Hg19::chr5:119799576..119799585,+#_adb8ee52c4f90da47fe854844baebae7p10@PRR16
3.29e-195FFCP PHASE2:Hg19::chr11:18067904..18067908,-#_adb8ee52c4f90da47fe854844baebae7p@chr11:18067904..18067908, -
3.29e-195FFCP PHASE2:Hg19::chr2:108616342..108616384,+#_adb8ee52c4f90da47fe854844baebae7p@chr2:108616342..108616384, +
3.29e-195FFCP PHASE1:Hg19::chr9:25264978..25265001,+#_adb8ee52c4f90da47fe854844baebae7p@chr9:25264978..25265001, +
3.29e-195FFCP PHASE2:Hg19::chr1:45782001..45782009,+#_adb8ee52c4f90da47fe854844baebae7p@chr1:45782001..45782009, +
3.29e-195FFCP PHASE1:Hg19::chr2:216447425..216447432,-#_adb8ee52c4f90da47fe854844baebae7p2@ENST00000457625
3.29e-195FFCP PHASE2:Hg19::chr12:6956383..6956390,+#_adb8ee52c4f90da47fe854844baebae7p@chr12:6956383..6956390, +