FFCP PHASE1:Hg19::chr10:104523254..104523259,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_AY656173_5end | |association_with_transcript=0bp_to_AY656173_5end | ||
|cluster_id=chr10:104523254..104523259,+ | |||
|coexpression_cluster_id=C84 | |||
|description=CAGE_peak_1_at_AY656173_5end | |description=CAGE_peak_1_at_AY656173_5end | ||
|id=chr10:104523254..104523259,+ | |id=chr10:104523254..104523259,+ | ||
|ontology_enrichment_celltype=CL:0002274!1.17e-17!5;CL:0000457!1.17e-17!5;CL:0002191!1.17e-17!5;CL:0000097!1.17e-17!5;CL:0000831!1.17e-17!5;CL:0002028!1.17e-17!5;CL:0002541!2.48e-17!3;CL:0000039!1.39e-12!7;CL:0000586!1.39e-12!7;CL:0002537!4.12e-10!5;CL:0000163!7.48e-10!9 | |ontology_enrichment_celltype=CL:0002274!1.17e-17!5;CL:0000457!1.17e-17!5;CL:0002191!1.17e-17!5;CL:0000097!1.17e-17!5;CL:0000831!1.17e-17!5;CL:0002028!1.17e-17!5;CL:0002541!2.48e-17!3;CL:0000039!1.39e-12!7;CL:0000586!1.39e-12!7;CL:0002537!4.12e-10!5;CL:0000163!7.48e-10!9 | ||
|ontology_enrichment_celltype_v019=CL:0000097;6.66e-57;5!CL:0002541;7.93e-55;3!CL:0000163;6.90e-32;9!CL:0000039;5.23e-24;7!CL:0000586;5.23e-24;7!CL:0000349;2.93e-09;19!CL:0000151;2.71e-08;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,8.91e-57,5;CL:0002028,8.91e-57,5;CL:0002541,8.69e-55,3;CL:0000163,8.10e-32,9;CL:0000039,4.48e-24,7;CL:0000586,4.48e-24,7;CL:0000349,2.98e-09,19;CL:0000151,3.02e-08,36 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1036!2.00e-10!8;DOID:8692!3.10e-07!31;DOID:1799!6.96e-07!1;DOID:10165!6.96e-07!1;DOID:1798!6.96e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:1799;2.06e-19;1!DOID:10165;2.06e-19;1!DOID:1798;2.06e-19;1!DOID:3095;4.44e-08;22!DOID:2994;4.44e-08;22 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,1.88e-19,1;DOID:10165,1.88e-19,1;DOID:1798,1.88e-19,1;DOID:3095,4.23e-08,22;DOID:2994,4.23e-08,22 | |||
|ontology_enrichment_uberon=UBERON:0005631!3.87e-29!14;UBERON:0000158!3.87e-29!14;UBERON:0003124!5.59e-19!7;UBERON:0000476!2.48e-17!3;UBERON:0000920!2.48e-17!3;UBERON:0000478!2.39e-16!24;UBERON:0000305!3.18e-12!7;UBERON:0004923!9.76e-11!57;UBERON:0004871!1.04e-10!8;UBERON:0004177!9.78e-07!7 | |ontology_enrichment_uberon=UBERON:0005631!3.87e-29!14;UBERON:0000158!3.87e-29!14;UBERON:0003124!5.59e-19!7;UBERON:0000476!2.48e-17!3;UBERON:0000920!2.48e-17!3;UBERON:0000478!2.39e-16!24;UBERON:0000305!3.18e-12!7;UBERON:0004923!9.76e-11!57;UBERON:0004871!1.04e-10!8;UBERON:0004177!9.78e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0003124;7.93e-55;3!UBERON:0000920;7.93e-55;3!UBERON:0005631;5.12e-17;10!UBERON:0000158;5.12e-17;10!UBERON:0000478;1.91e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,8.69e-55,3;UBERON:0003124,5.66e-24,7;UBERON:0005631,2.44e-12,14;UBERON:0000158,2.44e-12,14;UBERON:0000478,1.93e-07,24 | |||
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|short_description=p1@AY656173 | |short_description=p1@AY656173 | ||
}} | }} |
Latest revision as of 09:52, 23 July 2015
Short description: | p1@AY656173 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AY656173_5end |
Coexpression cluster: | C84_choriocarcinoma_pancreatic_Wilms_Mallassezderived_thymus_salivary_colon |
Association with transcript: | 0bp_to_AY656173_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 8.91e-57 | 5 |
basophil mast progenitor cell | 8.91e-57 | 5 |
chorionic membrane mesenchymal stem cell | 8.69e-55 | 3 |
endocrine cell | 8.10e-32 | 9 |
germ line cell | 4.48e-24 | 7 |
germ cell | 4.48e-24 | 7 |
extraembryonic cell | 2.98e-09 | 19 |
secretory cell | 3.02e-08 | 36 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 8.69e-55 | 3 |
chorion | 5.66e-24 | 7 |
extraembryonic membrane | 2.44e-12 | 14 |
membranous layer | 2.44e-12 | 14 |
extraembryonic structure | 1.93e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 1.88e-19 | 1 |
endocrine pancreas cancer | 1.88e-19 | 1 |
pancreatic endocrine carcinoma | 1.88e-19 | 1 |
germ cell and embryonal cancer | 4.23e-08 | 22 |
germ cell cancer | 4.23e-08 | 22 |