FFCP PHASE1:Hg19::chr10:104928319..104928323,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:104928319..104928323,- | |||
|description=CAGE_peak_at_chr10:104928319..104928323,- | |description=CAGE_peak_at_chr10:104928319..104928323,- | ||
|id=chr10:104928319..104928323,- | |id=chr10:104928319..104928323,- | ||
|ontology_enrichment_celltype=CL:0000066!1.98e-09!254;CL:0002076!5.70e-09!43;CL:0000622!4.79e-08!5;CL:0002623!4.85e-08!3 | |ontology_enrichment_celltype=CL:0000066!1.98e-09!254;CL:0002076!5.70e-09!43;CL:0000622!4.79e-08!5;CL:0002623!4.85e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0002623;6.50e-07;3!CL:0002621;8.86e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002623,6.88e-07,3;CL:0002621,8.62e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0000358;3.74e-18;1!UBERON:0009143;3.74e-18;1 | |||
|ontology_enrichment_disease=DOID:305!4.35e-10!106;DOID:0050687!1.68e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001004!7.51e-11!72;UBERON:0000065!1.98e-08!53;UBERON:0001737!4.25e-08!9;UBERON:0000072!4.95e-08!46;UBERON:0008947!1.05e-07!38;UBERON:0003258!1.05e-07!38;UBERON:0004119!1.54e-07!169;UBERON:0000925!1.54e-07!169;UBERON:0006595!1.54e-07!169;UBERON:0001007!5.27e-07!155;UBERON:0001555!5.27e-07!155;UBERON:0007026!5.27e-07!155;UBERON:0004921!5.68e-07!129;UBERON:0004185!5.68e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0002372;9.48e-18;1!UBERON:0001961;9.48e-18;1!UBERON:0001744;9.48e-18;1!UBERON:0001042;9.48e-18;1!UBERON:0001735;9.48e-18;1!UBERON:0003127;1.51e-09;2!UBERON:0000341;1.51e-09;2!UBERON:0006562;1.51e-09;2!UBERON:0000161;1.84e-08;19!UBERON:0000166;1.84e-08;19!UBERON:0001043;6.50e-07;3!UBERON:0001949;8.86e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002372,6.23e-18,1;UBERON:0001961,6.23e-18,1;UBERON:0001744,6.23e-18,1;UBERON:0001735,6.23e-18,1;UBERON:0000341,1.12e-09,2;UBERON:0003127,2.02e-09,2;UBERON:0000166,2.12e-07,22;UBERON:0001043,6.50e-07,3;UBERON:0009143,6.50e-07,3;UBERON:0001949,8.62e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358779271377724,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0.169560592310488,1.35282597214308,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0.354920400119532,0,0.241011029883482,0.110293972732394,0,0.237270619111097,0,0.392442930250692,0.38474715694639,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790204397959275,0.858486162094873,0,0,0,0,0.839910640994298,0.141775097242386,0.179117045405697,0.871901815541886,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0.1466765716419,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0.601892199455438,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.482561763430822,0,0,0,0,0,0,0,0,0.828728900423067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0.127612712494584,0,0,0,0,0,0.532306030317022,0,0,0,0,0,0,0,0,0,0.78494864019923,0.179872457583315,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0.0962221127255121,0.670302275535787,0,0,0,0,1.33029046061003,0,0,0,0,0,0,0,0,0,0,0,0.980160863924127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.19161406559267,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,1.39423744278603,0.538651809526579,0,0,0,0.217294743844016,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0.694238953340524,0.195984794828755,0.174118413160805,0,0,0.0967563312890851,0.292357268344742,0.0821154570532092,2.32773639572207,0,0.90392296312213,0,0,0,0.977756913674015,0,0,0,0,0,0,0,0,0.471388069233591,0.135904206073614,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0.399358000997982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335434687599266,0,0,0,0.179287339332845,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0.941063278792687,0,0,0,0,0,0,0,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192914038270915,0,0,0.345430341731199,0,0,0,0,0,0,0,0.211312123358627,0,0.106691729694141,0,0,0,0.279759015438889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0.0679697329768317,0,0,0.222462803784138,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0.414432328326074,0.85359238546975,2.07377898544228,0,0,0,0,1.14553434272025,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07132363163395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70587185520785,0,0,0,0,0,0,0.217716747896961,0,1.54909721933551,1.00411087549747,0.332660356546013,0.0814032686109745,0,0,0.359300808426348,2.34640942403454,0,0.406896178315738,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358779271377724,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0.169560592310488,1.35282597214308,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0.354920400119532,0,0.241011029883482,0.110293972732394,0,0.237270619111097,0,0.392442930250692,0.38474715694639,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790204397959275,0.858486162094873,0,0,0,0,0.839910640994298,0.141775097242386,0.179117045405697,0.871901815541886,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0.1466765716419,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0.601892199455438,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.482561763430822,0,0,0,0,0,0,0,0,0.828728900423067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0.127612712494584,0,0,0,0,0,0.532306030317022,0,0,0,0,0,0,0,0,0,0.78494864019923,0.179872457583315,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0.0962221127255121,0.670302275535787,0,0,0,0,1.33029046061003,0,0,0,0,0,0,0,0,0,0,0,0.980160863924127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.19161406559267,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,1.39423744278603,0.538651809526579,0,0,0,0.217294743844016,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0.694238953340524,0.195984794828755,0.174118413160805,0,0,0.0967563312890851,0.292357268344742,0.0821154570532092,2.32773639572207,0,0.90392296312213,0,0,0,0.977756913674015,0,0,0,0,0,0,0,0,0.471388069233591,0.135904206073614,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0.399358000997982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335434687599266,0,0,0,0.179287339332845,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0.941063278792687,0,0,0,0,0,0,0,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192914038270915,0,0,0.345430341731199,0,0,0,0,0,0,0,0.211312123358627,0,0.106691729694141,0,0,0,0.279759015438889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0.0679697329768317,0,0,0.222462803784138,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0.414432328326074,0.85359238546975,2.07377898544228,0,0,0,0,1.14553434272025,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07132363163395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70587185520785,0,0,0,0,0,0,0.217716747896961,0,1.54909721933551,1.00411087549747,0.332660356546013,0.0814032686109745,0,0,0.359300808426348,2.34640942403454,0,0.406896178315738,0,0,0 | ||
|short_description=p@chr10:104928319..104928323,- | |short_description=p@chr10:104928319..104928323,- | ||
}} | }} |
Latest revision as of 09:56, 23 July 2015
Short description: | p@chr10:104928319..104928323, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:104928319..104928323, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell of salivary gland | 6.88e-07 | 3 |
gingival epithelial cell | 8.62e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
tonsil | 6.23e-18 | 1 |
mucosa-associated lymphoid tissue | 6.23e-18 | 1 |
lymphoid tissue | 6.23e-18 | 1 |
tonsillar ring | 6.23e-18 | 1 |
throat | 1.12e-09 | 2 |
open tracheal system trachea | 2.02e-09 | 2 |
oral opening | 2.12e-07 | 22 |
esophagus | 6.50e-07 | 3 |
esophageal region | 6.50e-07 | 3 |
gingival epithelium | 8.62e-07 | 3 |