FFCP PHASE1:Hg19::chr10:116275541..116275544,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:116275541..116275544,+ | |||
|coexpression_cluster_id=C60 | |coexpression_cluster_id=C60 | ||
|description=CAGE_peak_at_chr10:116275541..116275544,+ | |description=CAGE_peak_at_chr10:116275541..116275544,+ | ||
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|ontology_enrichment_celltype=CL:0001014!1.39e-20!2;CL:0001016!1.39e-20!2;CL:0000453!8.67e-09!5;CL:0000840!1.84e-07!5;CL:0001029!1.84e-07!5;CL:0000624!3.46e-07!6 | |ontology_enrichment_celltype=CL:0001014!1.39e-20!2;CL:0001016!1.39e-20!2;CL:0000453!8.67e-09!5;CL:0000840!1.84e-07!5;CL:0001029!1.84e-07!5;CL:0000624!3.46e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0001014;8.10e-26;2!CL:0001016;8.10e-26;2!CL:0000453;3.42e-11;5!CL:0000840;1.50e-09;5!CL:0000990;8.61e-07;8 | |ontology_enrichment_celltype_v019=CL:0001014;8.10e-26;2!CL:0001016;8.10e-26;2!CL:0000453;3.42e-11;5!CL:0000840;1.50e-09;5!CL:0000990;8.61e-07;8 | ||
|ontology_enrichment_celltype_v019_2=CL:0001014,7.14e-26,2;CL:0001016,7.14e-26,2;CL:0000453,3.26e-11,5;CL:0000840,1.44e-09,5;CL:0001029,1.44e-09,5;CL:0000990,8.37e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0009143;1.88e-50;1!UBERON:0008814;8.10e-26;2!UBERON:0010056;8.10e-26;2 | |ontology_enrichment_development_v019=UBERON:0009143;1.88e-50;1!UBERON:0008814;8.10e-26;2!UBERON:0010056;8.10e-26;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001723!5.37e-14!3;UBERON:0001033!5.37e-14!3;UBERON:0010056!5.37e-14!3;UBERON:0002372!3.76e-11!1;UBERON:0001961!3.76e-11!1;UBERON:0001744!3.76e-11!1;UBERON:0001735!3.76e-11!1;UBERON:0001042!2.30e-09!10;UBERON:0009145!2.30e-09!10;UBERON:0000078!7.74e-09!18;UBERON:0006562!1.47e-08!11;UBERON:0000166!1.35e-07!21;UBERON:0000002!2.45e-07!6;UBERON:0001560!2.45e-07!6 | |ontology_enrichment_uberon=UBERON:0001723!5.37e-14!3;UBERON:0001033!5.37e-14!3;UBERON:0010056!5.37e-14!3;UBERON:0002372!3.76e-11!1;UBERON:0001961!3.76e-11!1;UBERON:0001744!3.76e-11!1;UBERON:0001735!3.76e-11!1;UBERON:0001042!2.30e-09!10;UBERON:0009145!2.30e-09!10;UBERON:0000078!7.74e-09!18;UBERON:0006562!1.47e-08!11;UBERON:0000166!1.35e-07!21;UBERON:0000002!2.45e-07!6;UBERON:0001560!2.45e-07!6 | ||
|ontology_enrichment_uberon_v019=UBERON:0000341;4.90e-26;2!UBERON:0001043;7.35e-18;3!UBERON:0001723;1.03e-17;3!UBERON:0001033;1.03e-17;3!UBERON:0000974;1.27e-09;6 | |ontology_enrichment_uberon_v019=UBERON:0000341;4.90e-26;2!UBERON:0001043;7.35e-18;3!UBERON:0001723;1.03e-17;3!UBERON:0001033;1.03e-17;3!UBERON:0000974;1.27e-09;6 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000341,5.56e-26,2;UBERON:0001043,6.76e-18,3;UBERON:0009143,6.76e-18,3;UBERON:0001723,1.12e-17,3;UBERON:0001033,1.12e-17,3;UBERON:0010056,1.12e-17,3 | |||
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|short_description=p@chr10:116275541..116275544,+ | |short_description=p@chr10:116275541..116275544,+ | ||
}} | }} |
Latest revision as of 10:39, 23 July 2015
Short description: | p@chr10:116275541..116275544, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:116275541..116275544, + |
Coexpression cluster: | C60_esophagus_tonsil_throat_tongue_uterus_cervix_cervical |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 7.14e-26 | 2 |
immature CD1a-positive Langerhans cell | 7.14e-26 | 2 |
Langerhans cell | 3.26e-11 | 5 |
immature conventional dendritic cell | 1.44e-09 | 5 |
common dendritic progenitor | 1.44e-09 | 5 |
conventional dendritic cell | 8.37e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
throat | 5.56e-26 | 2 |
esophagus | 6.76e-18 | 3 |
esophageal region | 6.76e-18 | 3 |
tongue | 1.12e-17 | 3 |
gustatory system | 1.12e-17 | 3 |
future tongue | 1.12e-17 | 3 |