FFCP PHASE1:Hg19::chr10:123847162..123847174,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr10:123847162..123847174,+ | |||
|coexpression_cluster_id=C2041 | |||
|description=CAGE_peak_at_chr10:123847162..123847174,+ | |||
|id=chr10:123847162..123847174,+ | |||
|ontology_enrichment_celltype=CL:0002076!2.23e-15!43;CL:0002251!7.99e-14!21;CL:0000622!1.32e-13!5;CL:0002623!5.79e-13!3;CL:0000154!2.37e-11!6;CL:0000223!2.29e-10!59;CL:0001014!1.19e-09!2;CL:0001016!1.19e-09!2;CL:0000150!1.41e-07!9;CL:0000076!6.28e-07!62 | |||
|ontology_enrichment_celltype_v019=CL:0001014;2.12e-11;2!CL:0001016;2.12e-11;2!CL:0000317;3.52e-11;2!CL:1000448;3.52e-11;2!CL:0002308;3.52e-11;2!CL:0002140;3.52e-11;2!CL:0000362;1.01e-09;9!CL:0002231;7.02e-08;3!CL:0002178;7.02e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0001014,2.02e-11,2;CL:0001016,2.02e-11,2;CL:0000317,4.09e-11,2;CL:1000448,4.09e-11,2;CL:0002308,4.09e-11,2;CL:0002140,4.09e-11,2;CL:0000362,1.20e-09,9;CL:0002178,5.93e-08,3;CL:0002231,6.78e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!2.61e-13!14 | |||
|ontology_enrichment_disease_v019=DOID:3151;5.71e-21;1!DOID:3149;5.71e-21;1!DOID:3451;3.52e-11;2!DOID:4159;3.52e-11;2!DOID:0060122;3.52e-11;2!DOID:3493;3.52e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,4.22e-21,1;DOID:3149,4.22e-21,1;DOID:3493,2.73e-11,2;DOID:3451,3.02e-11,2;DOID:4159,3.02e-11,2;DOID:0060122,3.02e-11,2 | |||
|ontology_enrichment_uberon=UBERON:0000166!9.69e-21!21;UBERON:0000165!8.14e-18!28;UBERON:0000930!8.14e-18!28;UBERON:0000161!1.59e-16!35;UBERON:0003729!1.96e-12!5;UBERON:0003102!2.97e-12!95;UBERON:0001004!4.05e-12!72;UBERON:0001044!3.27e-11!6;UBERON:0003293!3.27e-11!6;UBERON:0003294!3.27e-11!6;UBERON:0010047!3.27e-11!6;UBERON:0000167!3.27e-11!6;UBERON:0001444!4.02e-11!48;UBERON:0000078!3.89e-10!18;UBERON:0003343!2.96e-09!4;UBERON:0004785!2.96e-09!4;UBERON:0004119!6.51e-08!169;UBERON:0000925!6.51e-08!169;UBERON:0006595!6.51e-08!169;UBERON:0000344!9.34e-08!12;UBERON:0003408!9.68e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0000997;5.71e-21;1!UBERON:0005056;5.71e-21;1!UBERON:0004176;5.71e-21;1!UBERON:0002419;3.52e-11;2!UBERON:0007771;3.52e-11;2!UBERON:0003297;3.52e-11;2!UBERON:0001821;3.52e-11;2!UBERON:0003487;3.52e-11;2!UBERON:0001820;3.52e-11;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000997,6.31e-21,1;UBERON:0005056,6.31e-21,1;UBERON:0002419,4.09e-11,2;UBERON:0007771,4.09e-11,2;UBERON:0003297,4.09e-11,2;UBERON:0001821,4.09e-11,2;UBERON:0003487,4.09e-11,2;UBERON:0001820,4.09e-11,2;UBERON:0005089,4.09e-11,2;UBERON:0005088,4.09e-11,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329250856225877,0,1.00528972411631,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19705285616665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14853107599234,0,0,0,0,0,0,0,0,0,0,0,0.576570202095319,0.255225424989168,0.910420027699949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0,0.341380344856499,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,5.99522100397994,0.230850775511391,0,0.23056390438806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17590876897253,0,0,0,0,0,0,0.290967049465258,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449947783103001,4.6428117273477,0,1.34173875039706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.46838880439127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.37795163123056,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0.11796972334774,0.366857197043358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606965604236632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.62164849248911,0.17071847709395,0.691259661814092,0,0,0,0,0,0,0,0,1.47225350422864,0,0.647428837187895,0.205325613712494,0,0,0,0,0,0,0,0.452888530700021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0.0636471582781649,0,0.217716747896961,0.684466602170562,0.134704106029175,0,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | |||
|short_description=p@chr10:123847162..123847174,+ | |||
}} |
Latest revision as of 11:09, 23 July 2015
Short description: | p@chr10:123847162..123847174, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:123847162..123847174, + |
Coexpression cluster: | C2041_cervical_immature_malignant_keratoacanthoma_salivary_nasal_epidermoid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 2.02e-11 | 2 |
immature CD1a-positive Langerhans cell | 2.02e-11 | 2 |
sebum secreting cell | 4.09e-11 | 2 |
epithelial cell of sweat gland | 4.09e-11 | 2 |
epithelial cell of skin gland | 4.09e-11 | 2 |
acinar cell of sebaceous gland | 4.09e-11 | 2 |
epidermal cell | 1.20e-09 | 9 |
epithelial cell of stomach | 5.93e-08 | 3 |
epithelial cell of prostate | 6.78e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
mammalian vulva | 6.31e-21 | 1 |
external female genitalia | 6.31e-21 | 1 |
skin gland | 4.09e-11 | 2 |
epidermis gland | 4.09e-11 | 2 |
gland of integumental system | 4.09e-11 | 2 |
sebaceous gland | 4.09e-11 | 2 |
skin sebaceous gland | 4.09e-11 | 2 |
sweat gland | 4.09e-11 | 2 |
sweat gland placode | 4.09e-11 | 2 |
sebaceous gland placode | 4.09e-11 | 2 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 4.22e-21 | 1 |
keratoacanthoma | 4.22e-21 | 1 |
signet ring cell adenocarcinoma | 2.73e-11 | 2 |
skin carcinoma | 3.02e-11 | 2 |
skin cancer | 3.02e-11 | 2 |
integumentary system cancer | 3.02e-11 | 2 |