FFCP PHASE1:Hg19::chr10:124897677..124897682,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-129bp_to_AY006141_5end | |association_with_transcript=-129bp_to_AY006141_5end | ||
|cluster_id=chr10:124897677..124897682,+ | |||
|coexpression_cluster_id=C2043 | |coexpression_cluster_id=C2043 | ||
|description=CAGE_peak_1_at_AY006141_5end | |description=CAGE_peak_1_at_AY006141_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002322!4.81e-09!5 | |ontology_enrichment_celltype=CL:0002322!4.81e-09!5 | ||
|ontology_enrichment_celltype_v019=CL:0000946;1.71e-19;1!CL:0000786;1.71e-19;1!CL:0000047;2.85e-10;2!CL:0000322;2.05e-07;3 | |ontology_enrichment_celltype_v019=CL:0000946;1.71e-19;1!CL:0000786;1.71e-19;1!CL:0000047;2.85e-10;2!CL:0000322;2.05e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000946,1.88e-19,1;CL:0000786,1.88e-19,1;CL:0000980,1.88e-19,1;CL:0000785,2.07e-10,2;CL:0000955,2.07e-10,2;CL:0000818,2.07e-10,2;CL:0000954,2.07e-10,2;CL:0000816,2.07e-10,2;CL:0000322,2.05e-07,3;CL:0000817,2.32e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000954;1.97e-10;2 | |ontology_enrichment_development_v019=CL:0000954;1.97e-10;2 | ||
|ontology_enrichment_disease=DOID:1240!1.37e-10!39;DOID:8692!3.10e-10!31;DOID:2531!5.85e-10!51;DOID:0060083!5.85e-10!51;DOID:162!3.63e-08!235;DOID:14566!8.03e-08!239 | |ontology_enrichment_disease=DOID:1240!1.37e-10!39;DOID:8692!3.10e-10!31;DOID:2531!5.85e-10!51;DOID:0060083!5.85e-10!51;DOID:162!3.63e-08!235;DOID:14566!8.03e-08!239 | ||
|ontology_enrichment_disease_v019=DOID:8692;1.17e-13;31!DOID:3910;1.72e-10;2!DOID:1240;2.91e-08;39 | |ontology_enrichment_disease_v019=DOID:8692;1.17e-13;31!DOID:3910;1.72e-10;2!DOID:1240;2.91e-08;39 | ||
|ontology_enrichment_disease_v019_2=DOID:8692,8.91e-15,31;DOID:1240,9.10e-12,39;DOID:3910,1.72e-10,2;DOID:2531,5.18e-09,51;DOID:0060083,5.18e-09,51 | |||
|ontology_enrichment_uberon=UBERON:0001737!1.69e-11!9 | |ontology_enrichment_uberon=UBERON:0001737!1.69e-11!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0004903;1.72e-10;2!UBERON:0002173;1.72e-10;2!UBERON:0002186;1.72e-10;2!UBERON:0004821;2.05e-07;3!UBERON:0007499;2.05e-07;3!UBERON:0003215;2.05e-07;3!UBERON:0010368;2.05e-07;3!UBERON:0009911;2.05e-07;3!UBERON:0002299;2.05e-07;3!UBERON:0006524;2.05e-07;3!UBERON:0008874;2.05e-07;3!UBERON:0002169;2.05e-07;3!UBERON:0004894;2.05e-07;3 | |ontology_enrichment_uberon_v019=UBERON:0004903;1.72e-10;2!UBERON:0002173;1.72e-10;2!UBERON:0002186;1.72e-10;2!UBERON:0004821;2.05e-07;3!UBERON:0007499;2.05e-07;3!UBERON:0003215;2.05e-07;3!UBERON:0010368;2.05e-07;3!UBERON:0009911;2.05e-07;3!UBERON:0002299;2.05e-07;3!UBERON:0006524;2.05e-07;3!UBERON:0008874;2.05e-07;3!UBERON:0002169;2.05e-07;3!UBERON:0004894;2.05e-07;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,1.72e-10,2;UBERON:0002173,1.72e-10,2;UBERON:0002186,1.72e-10,2;UBERON:0004821,2.05e-07,3;UBERON:0003215,2.05e-07,3;UBERON:0010368,2.05e-07,3;UBERON:0009911,2.05e-07,3;UBERON:0002299,2.05e-07,3;UBERON:0006524,2.05e-07,3;UBERON:0008874,2.05e-07,3;UBERON:0002169,2.05e-07,3;UBERON:0004894,2.05e-07,3 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.132529768321485,0.232387885739037,0.10366105501537,0,0,0,0,0,0,0,0.473227200159376,0.505754070234305,0,0.330881918197182,0,0.474541238222193,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0.0711418433484141,0.159426272728822,0,0,0,0,0,0,0,0,0,2.08764497634809,4.84319297258514,0,0,0,0.671028323677248,0.333698283423817,0,0.278406173895242,0,1.6227340708559,0,0,0,0,0,0,3.12549761487054,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,5.62729607249559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0,0,0,0,0,0,0,0,0,0,0,0.676786981851542,0.392125068635479,0.503464760927528,1.70778359451767,0,0,0,0,0,0,0.0884575645033392,0,0.296521128680622,0.741383633679017,0.417687798021821,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330991955875499,0,1.19472429772959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0.196854963029498,0.0846733320657845,0,0,0,0,0.83088067605837,0,0,0,0,0,0,0,0.35857467866569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.941063278792687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0,0,0.260994291965212,0,0,0,0,0,0,0,0,0,0,0,0.607719912354764,0,0,0,0,0.655219697692825,0,0,0.19998739585493,0,0,0,0,0.279759015438889,0,0,1.61737217095023,0,0,0,0,0.123935764259002,0,0,0.47317047000752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0,2.07421177600403,0,0,0,0,0,0.078493092850514,0,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,1.16969731731053,0,0.475680363110274,0,0,0,0,0.437119121007915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157771562193185,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.641136984606466 | |phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.132529768321485,0.232387885739037,0.10366105501537,0,0,0,0,0,0,0,0.473227200159376,0.505754070234305,0,0.330881918197182,0,0.474541238222193,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0.0711418433484141,0.159426272728822,0,0,0,0,0,0,0,0,0,2.08764497634809,4.84319297258514,0,0,0,0.671028323677248,0.333698283423817,0,0.278406173895242,0,1.6227340708559,0,0,0,0,0,0,3.12549761487054,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,5.62729607249559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0,0,0,0,0,0,0,0,0,0,0,0.676786981851542,0.392125068635479,0.503464760927528,1.70778359451767,0,0,0,0,0,0,0.0884575645033392,0,0.296521128680622,0.741383633679017,0.417687798021821,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330991955875499,0,1.19472429772959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0.196854963029498,0.0846733320657845,0,0,0,0,0.83088067605837,0,0,0,0,0,0,0,0.35857467866569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.941063278792687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0,0,0.260994291965212,0,0,0,0,0,0,0,0,0,0,0,0.607719912354764,0,0,0,0,0.655219697692825,0,0,0.19998739585493,0,0,0,0,0.279759015438889,0,0,1.61737217095023,0,0,0,0,0.123935764259002,0,0,0.47317047000752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0,2.07421177600403,0,0,0,0,0,0.078493092850514,0,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,1.16969731731053,0,0.475680363110274,0,0,0,0,0.437119121007915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157771562193185,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.641136984606466 | ||
|short_description=p1@AY006141 | |short_description=p1@AY006141 | ||
}} | }} |
Latest revision as of 11:16, 23 July 2015
Short description: | p1@AY006141 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AY006141_5end |
Coexpression cluster: | C2043_plasma_acute_biphenotypic_small_chronic_alveolar_cord |
Association with transcript: | -129bp_to_AY006141_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
antibody secreting cell | 1.88e-19 | 1 |
plasma cell | 1.88e-19 | 1 |
plasmablast | 1.88e-19 | 1 |
mature B cell | 2.07e-10 | 2 |
pre-B-II cell | 2.07e-10 | 2 |
transitional stage B cell | 2.07e-10 | 2 |
small pre-B-II cell | 2.07e-10 | 2 |
immature B cell | 2.07e-10 | 2 |
pneumocyte | 2.05e-07 | 3 |
precursor B cell | 2.32e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 1.72e-10 | 2 |
alveolar duct | 1.72e-10 | 2 |
bronchiole | 1.72e-10 | 2 |
pulmonary alveolus epithelium | 2.05e-07 | 3 |
alveolus | 2.05e-07 | 3 |
pulmonary lobule | 2.05e-07 | 3 |
lobule | 2.05e-07 | 3 |
alveolus of lung | 2.05e-07 | 3 |
alveolar system | 2.05e-07 | 3 |
pulmonary acinus | 2.05e-07 | 3 |
alveolar sac | 2.05e-07 | 3 |
alveolar wall | 2.05e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 8.91e-15 | 31 |
leukemia | 9.10e-12 | 39 |
lung adenocarcinoma | 1.72e-10 | 2 |
hematologic cancer | 5.18e-09 | 51 |
immune system cancer | 5.18e-09 | 51 |