FFCP PHASE1:Hg19::chr10:127684574..127684597,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:127684574..127684597,+ | |||
|coexpression_cluster_id=C103 | |coexpression_cluster_id=C103 | ||
|description=CAGE_peak_at_chr10:127684574..127684597,+ | |description=CAGE_peak_at_chr10:127684574..127684597,+ | ||
|id=chr10:127684574..127684597,+ | |id=chr10:127684574..127684597,+ | ||
|ontology_enrichment_celltype=CL:0000791!6.88e-47!18;CL:0000789!6.88e-47!18;CL:0002420!6.88e-47!18;CL:0002419!6.88e-47!18;CL:0000790!6.88e-47!18;CL:0000084!4.82e-38!25;CL:0000827!4.82e-38!25;CL:0000624!4.05e-28!6;CL:0000625!7.17e-25!11;CL:0000838!3.14e-24!52;CL:0000542!1.08e-23!53;CL:0000051!1.08e-23!53;CL:0000898!3.26e-15!3;CL:0000080!7.54e-13!6;CL:0000815!4.35e-11!2;CL:0000792!4.35e-11!2;CL:0002677!4.35e-11!2;CL:0002087!2.54e-09!119;CL:0000738!2.56e-08!140;CL:0000988!5.70e-08!182;CL:0002031!9.74e-08!124;CL:0000623!7.14e-07!3;CL:0000825!7.14e-07!3 | |ontology_enrichment_celltype=CL:0000791!6.88e-47!18;CL:0000789!6.88e-47!18;CL:0002420!6.88e-47!18;CL:0002419!6.88e-47!18;CL:0000790!6.88e-47!18;CL:0000084!4.82e-38!25;CL:0000827!4.82e-38!25;CL:0000624!4.05e-28!6;CL:0000625!7.17e-25!11;CL:0000838!3.14e-24!52;CL:0000542!1.08e-23!53;CL:0000051!1.08e-23!53;CL:0000898!3.26e-15!3;CL:0000080!7.54e-13!6;CL:0000815!4.35e-11!2;CL:0000792!4.35e-11!2;CL:0002677!4.35e-11!2;CL:0002087!2.54e-09!119;CL:0000738!2.56e-08!140;CL:0000988!5.70e-08!182;CL:0002031!9.74e-08!124;CL:0000623!7.14e-07!3;CL:0000825!7.14e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000815;4.59e-32;2!CL:0000792;4.59e-32;2!CL:0002677;4.59e-32;2!CL:0000898;9.46e-22;3!CL:0000624;2.25e-11;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000815,4.59e-32,2;CL:0000792,4.59e-32,2;CL:0002677,4.59e-32,2;CL:0000898,9.47e-22,3;CL:0000624,2.25e-11,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060060;2.43e-16;1!DOID:0060061;2.43e-16;1!DOID:8691;2.43e-16;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,3.07e-16,1;DOID:0060061,3.07e-16,1;DOID:8691,3.07e-16,1 | |||
|ontology_enrichment_uberon=UBERON:0000178!9.08e-19!15;UBERON:0000179!9.08e-19!15;UBERON:0000463!9.08e-19!15 | |ontology_enrichment_uberon=UBERON:0000178!9.08e-19!15;UBERON:0000179!9.08e-19!15;UBERON:0000463!9.08e-19!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0002331;3.93e-14;10!UBERON:0000178;1.26e-09;15!UBERON:0000179;1.26e-09;15!UBERON:0000463;1.26e-09;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,3.67e-14,10;UBERON:0000358,3.67e-14,10;UBERON:0000307,3.67e-14,10;UBERON:0000091,3.67e-14,10;UBERON:0000087,3.67e-14,10;UBERON:0007010,3.67e-14,10;UBERON:0007806,3.67e-14,10;UBERON:0008780,3.67e-14,10;UBERON:0005728,3.67e-14,10;UBERON:0000178,1.20e-09,15;UBERON:0000179,1.20e-09,15;UBERON:0000463,1.20e-09,15 | |||
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|short_description=p@chr10:127684574..127684597,+ | |short_description=p@chr10:127684574..127684597,+ | ||
}} | }} |
Latest revision as of 11:28, 23 July 2015
Short description: | p@chr10:127684574..127684597, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:127684574..127684597, + |
Coexpression cluster: | C103_CD4_CD8_Natural_Peripheral_Whole_Neutrophils_Basophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regulatory T cell | 4.59e-32 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 4.59e-32 | 2 |
naive regulatory T cell | 4.59e-32 | 2 |
naive T cell | 9.47e-22 | 3 |
CD4-positive, alpha-beta T cell | 2.25e-11 | 6 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 3.67e-14 | 10 |
blastocyst | 3.67e-14 | 10 |
blastula | 3.67e-14 | 10 |
bilaminar disc | 3.67e-14 | 10 |
inner cell mass | 3.67e-14 | 10 |
cleaving embryo | 3.67e-14 | 10 |
connecting stalk | 3.67e-14 | 10 |
inner cell mass derived epiblast | 3.67e-14 | 10 |
extraembryonic mesoderm | 3.67e-14 | 10 |
blood | 1.20e-09 | 15 |
haemolymphatic fluid | 1.20e-09 | 15 |
organism substance | 1.20e-09 | 15 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 3.07e-16 | 1 |
cutaneous T cell lymphoma | 3.07e-16 | 1 |
mycosis fungoides | 3.07e-16 | 1 |