FFCP PHASE1:Hg19::chr10:132938202..132938217,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:132938202..132938217,- | |||
|coexpression_cluster_id=C90 | |coexpression_cluster_id=C90 | ||
|description=CAGE_peak_at_chr10:132938202..132938217,- | |description=CAGE_peak_at_chr10:132938202..132938217,- | ||
|id=chr10:132938202..132938217,- | |id=chr10:132938202..132938217,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype=CL:0000242!3.80e-09!2 | ||
| | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_disease=DOID:171;7.72e-21;10!DOID:3095;4.33e-10;22!DOID:2994;4.33e-10;22 | |ontology_enrichment_celltype_v019_2= | ||
|ontology_enrichment_uberon=UBERON:0002346;4.00e-50;4!UBERON:0000923;4.00e-50;4!UBERON:0010316;4.00e-50;4!UBERON:0005291;4.00e-50;4!UBERON:0002050;2.22e-40;5!UBERON:0005423;2.22e-40;5!UBERON:0001905;7.14e-26;2!UBERON:0002757;7.14e-26;2!UBERON:0010134;7.14e-26;2!UBERON:0005408;7.14e-26;2!UBERON:0001899;7.14e-26;2!UBERON:0003296;1.13e-13;4!UBERON:0010133;1.13e-13;4!UBERON:0002784;1.13e-13;4!UBERON:0001872;3.26e-11;5!UBERON:0001894;2.18e-08;7 | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:171!2.39e-10!10;DOID:3095!2.44e-08!22;DOID:2994!2.44e-08!22 | |||
|ontology_enrichment_disease_v019=DOID:171;7.72e-21;10!DOID:3095;4.33e-10;22!DOID:2994;4.33e-10;22 | |||
|ontology_enrichment_disease_v019_2=DOID:171,6.99e-21,10;DOID:3095,4.14e-10,22;DOID:2994,4.14e-10,22 | |||
|ontology_enrichment_uberon=UBERON:0001049!7.36e-28!57;UBERON:0005068!7.36e-28!57;UBERON:0006241!7.36e-28!57;UBERON:0007135!7.36e-28!57;UBERON:0002616!4.21e-24!59;UBERON:0000955!5.10e-24!69;UBERON:0006238!5.10e-24!69;UBERON:0002780!1.46e-23!41;UBERON:0001890!1.46e-23!41;UBERON:0006240!1.46e-23!41;UBERON:0001017!1.74e-23!82;UBERON:0002346!1.88e-23!90;UBERON:0003080!6.43e-23!42;UBERON:0002619!1.37e-22!22;UBERON:0005743!3.88e-22!86;UBERON:0000073!1.91e-21!94;UBERON:0001016!1.91e-21!94;UBERON:0001950!6.15e-21!20;UBERON:0001869!1.62e-20!32;UBERON:0007023!3.05e-20!115;UBERON:0000956!1.12e-19!25;UBERON:0000203!1.12e-19!25;UBERON:0002020!3.47e-19!34;UBERON:0003528!3.47e-19!34;UBERON:0001893!3.68e-19!34;UBERON:0002791!5.25e-17!33;UBERON:0003075!9.04e-17!86;UBERON:0007284!9.04e-17!86;UBERON:0000200!3.60e-16!6;UBERON:0000924!8.84e-16!173;UBERON:0006601!8.84e-16!173;UBERON:0003056!1.20e-14!61;UBERON:0000153!3.95e-14!129;UBERON:0007811!3.95e-14!129;UBERON:0000033!9.63e-14!123;UBERON:0002771!1.57e-12!3;UBERON:0004121!1.86e-11!169;UBERON:0001905!1.74e-09!2;UBERON:0002757!1.74e-09!2;UBERON:0010134!1.74e-09!2;UBERON:0002784!1.74e-09!2;UBERON:0005408!1.74e-09!2;UBERON:0001899!1.74e-09!2;UBERON:0001871!3.08e-08!7;UBERON:0001872!8.14e-08!5;UBERON:0002021!8.34e-08!5;UBERON:0000349!8.34e-08!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002346;4.00e-50;4!UBERON:0000923;4.00e-50;4!UBERON:0010316;4.00e-50;4!UBERON:0005291;4.00e-50;4!UBERON:0002050;2.22e-40;5!UBERON:0005423;2.22e-40;5!UBERON:0001905;7.14e-26;2!UBERON:0002757;7.14e-26;2!UBERON:0010134;7.14e-26;2!UBERON:0005408;7.14e-26;2!UBERON:0001899;7.14e-26;2!UBERON:0003296;1.13e-13;4!UBERON:0010133;1.13e-13;4!UBERON:0002784;1.13e-13;4!UBERON:0001872;3.26e-11;5!UBERON:0001894;2.18e-08;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,7.14e-26,2;UBERON:0002757,7.14e-26,2;UBERON:0010134,7.14e-26,2;UBERON:0005408,7.14e-26,2;UBERON:0001899,7.14e-26,2;UBERON:0003296,1.13e-13,4;UBERON:0010133,1.13e-13,4;UBERON:0002784,1.13e-13,4;UBERON:0001872,3.60e-11,5;UBERON:0002346,5.98e-10,86;UBERON:0001894,2.18e-08,7;UBERON:0006222,2.18e-08,7 | |||
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| ||
|short_description=p@chr10:132938202..132938217,- | |short_description=p@chr10:132938202..132938217,- | ||
}} | }} |
Latest revision as of 11:42, 23 July 2015
Short description: | p@chr10:132938202..132938217, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:132938202..132938217, - |
Coexpression cluster: | C90_neuroectodermal_peripheral_neuroepithelioma_neuroblastoma_carcinoid_parietal_putamen |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 7.14e-26 | 2 |
regional part of epithalamus | 7.14e-26 | 2 |
secretory circumventricular organ | 7.14e-26 | 2 |
circumventricular organ | 7.14e-26 | 2 |
epithalamus | 7.14e-26 | 2 |
gland of diencephalon | 1.13e-13 | 4 |
neuroendocrine gland | 1.13e-13 | 4 |
regional part of diencephalon | 1.13e-13 | 4 |
parietal lobe | 3.60e-11 | 5 |
neurectoderm | 5.98e-10 | 86 |
diencephalon | 2.18e-08 | 7 |
future diencephalon | 2.18e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 6.99e-21 | 10 |
germ cell and embryonal cancer | 4.14e-10 | 22 |
germ cell cancer | 4.14e-10 | 22 |