FFCP PHASE1:Hg19::chr10:133584190..133584202,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:133584190..133584202,+ | |||
|coexpression_cluster_id=C58 | |||
|description=CAGE_peak_at_chr10:133584190..133584202,+ | |description=CAGE_peak_at_chr10:133584190..133584202,+ | ||
|id=chr10:133584190..133584202,+ | |id=chr10:133584190..133584202,+ | ||
|ontology_enrichment_celltype=CL:0000148!6.98e-77!10;CL:0000541!6.98e-77!10;CL:0000147!1.24e-54!14;CL:0000710!6.34e-38!20;CL:0002322!1.95e-30!5;CL:0000075!8.40e-28!27;CL:0002077!1.55e-22!33;CL:0000325!6.91e-19!39;CL:0000333!5.11e-17!41;CL:0002567!9.60e-14!3;CL:0000133!1.24e-11!59;CL:0002566!2.53e-11!1;CL:0000221!1.63e-09!71;CL:0000181!8.58e-08!12;CL:0000417!8.58e-08!12;CL:0000668!8.58e-08!12;CL:0000414!8.58e-08!12;CL:0000412!8.58e-08!12;CL:0000182!8.58e-08!12 | |ontology_enrichment_celltype=CL:0000148!6.98e-77!10;CL:0000541!6.98e-77!10;CL:0000147!1.24e-54!14;CL:0000710!6.34e-38!20;CL:0002322!1.95e-30!5;CL:0000075!8.40e-28!27;CL:0002077!1.55e-22!33;CL:0000325!6.91e-19!39;CL:0000333!5.11e-17!41;CL:0002567!9.60e-14!3;CL:0000133!1.24e-11!59;CL:0002566!2.53e-11!1;CL:0000221!1.63e-09!71;CL:0000181!8.58e-08!12;CL:0000417!8.58e-08!12;CL:0000668!8.58e-08!12;CL:0000414!8.58e-08!12;CL:0000412!8.58e-08!12;CL:0000182!8.58e-08!12 | ||
|ontology_enrichment_celltype_v019=CL:0000148;8.39e-105;10!CL:0000147;8.07e-75;14!CL:0000710;2.61e-52;20!CL:0000075;1.13e-38;27!CL:0002322;4.48e-30;5!CL:0002077;7.66e-28;34!CL:0002566;2.66e-18;1!CL:0000182;5.93e-13;12!CL:0002321;1.73e-10;15!CL:0002567;8.86e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,1.26e-104,10;CL:0000541,1.26e-104,10;CL:0000147,1.08e-74,14;CL:0000710,3.20e-52,20;CL:0000075,1.31e-38,27;CL:0002077,1.37e-30,34;CL:0002322,7.02e-30,5;CL:0000333,4.19e-24,41;CL:0002566,2.66e-18,1;CL:0000133,7.43e-17,59;CL:0000221,8.38e-14,72;CL:0000182,5.81e-13,12;CL:0002321,4.89e-07,250;CL:0000066,5.27e-07,253;CL:0002567,8.15e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0004161;4.52e-14;11!UBERON:0009497;5.25e-12;13!CL:0000133;2.01e-08;59!CL:0000221;2.39e-07;72 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.11e-08;19!UBERON:0006925;2.11e-08;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.09e-08,19;UBERON:0006925,2.09e-08,19;UBERON:0008836,2.09e-08,19;UBERON:0008835,2.47e-07,22;UBERON:0003894,2.47e-07,22;UBERON:0009854,4.88e-07,23 | |||
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|short_description=p@chr10:133584190..133584202,+ | |short_description=p@chr10:133584190..133584202,+ | ||
}} | }} |
Latest revision as of 11:43, 23 July 2015
Short description: | p@chr10:133584190..133584202, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:133584190..133584202, + |
Coexpression cluster: | C58_Melanocyte_melanoma_retina_Retinal_eye_migratory_H9 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 1.26e-104 | 10 |
melanoblast | 1.26e-104 | 10 |
pigment cell | 1.08e-74 | 14 |
neurecto-epithelial cell | 3.20e-52 | 20 |
columnar/cuboidal epithelial cell | 1.31e-38 | 27 |
ecto-epithelial cell | 1.37e-30 | 34 |
embryonic stem cell | 7.02e-30 | 5 |
migratory neural crest cell | 4.19e-24 | 41 |
dark melanocyte | 2.66e-18 | 1 |
neurectodermal cell | 7.43e-17 | 59 |
ectodermal cell | 8.38e-14 | 72 |
hepatocyte | 5.81e-13 | 12 |
embryonic cell | 4.89e-07 | 250 |
epithelial cell | 5.27e-07 | 253 |
light melanocyte | 8.15e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
liver | 2.09e-08 | 19 |
digestive gland | 2.09e-08 | 19 |
liver bud | 2.09e-08 | 19 |
hepatic diverticulum | 2.47e-07 | 22 |
liver primordium | 2.47e-07 | 22 |
digestive tract diverticulum | 4.88e-07 | 23 |