FFCP PHASE1:Hg19::chr10:13570285..13570299,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-216bp_to_ENST00000438431_5end | |association_with_transcript=-216bp_to_ENST00000438431_5end | ||
|cluster_id=chr10:13570285..13570299,+ | |||
|coexpression_cluster_id=C1 | |coexpression_cluster_id=C1 | ||
|description=CAGE_peak_1_at_ENST00000438431_5end | |description=CAGE_peak_1_at_ENST00000438431_5end | ||
|id=chr10:13570285..13570299,+ | |id=chr10:13570285..13570299,+ | ||
|ontology_enrichment_celltype=CL:0002543!9.58e-16!6;CL:0002139!5.52e-14!24;CL:0000071!2.78e-12!18;CL:0002546!2.78e-12!18;CL:0002618!1.33e-11!3;CL:0000115!5.22e-11!35;CL:0002078!2.73e-08!44;CL:0000213!4.86e-07!57;CL:0000215!4.86e-07!57;CL:0002322!5.10e-07!5 | |ontology_enrichment_celltype=CL:0002543!9.58e-16!6;CL:0002139!5.52e-14!24;CL:0000071!2.78e-12!18;CL:0002546!2.78e-12!18;CL:0002618!1.33e-11!3;CL:0000115!5.22e-11!35;CL:0002078!2.73e-08!44;CL:0000213!4.86e-07!57;CL:0000215!4.86e-07!57;CL:0002322!5.10e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0002188;5.92e-08;5!CL:0002138;8.97e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002188,5.73e-08,5;CL:0005020,8.97e-07,6;CL:0002138,8.97e-07,6;CL:0005022,8.97e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.57e-14;10!UBERON:0005564;2.57e-14;10!CL:0005022;8.97e-07;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!2.78e-12!18;UBERON:0004638!2.78e-12!18;UBERON:0004852!2.78e-12!18;UBERON:0001638!2.16e-10!9;UBERON:0003920!2.16e-10!9;UBERON:0004582!2.16e-10!9;UBERON:0000487!8.43e-10!22;UBERON:0006914!1.83e-08!25;UBERON:0002066!3.95e-07!5 | |ontology_enrichment_uberon=UBERON:0001986!2.78e-12!18;UBERON:0004638!2.78e-12!18;UBERON:0004852!2.78e-12!18;UBERON:0001638!2.16e-10!9;UBERON:0003920!2.16e-10!9;UBERON:0004582!2.16e-10!9;UBERON:0000487!8.43e-10!22;UBERON:0006914!1.83e-08!25;UBERON:0002066!3.95e-07!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.27e-17;8!UBERON:0003135;4.12e-13;11!UBERON:0000991;2.48e-07;21!UBERON:0003101;4.86e-07;22!UBERON:0000079;4.86e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.33e-17,8;UBERON:0003135,4.25e-13,11;UBERON:0000991,2.52e-07,21;UBERON:0009196,2.52e-07,21;UBERON:0009117,2.52e-07,21;UBERON:0005564,2.52e-07,21;UBERON:0004176,4.94e-07,22;UBERON:0003101,4.94e-07,22;UBERON:0000079,4.94e-07,22 | |||
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| ||
|short_description=p1@ENST00000438431 | |short_description=p1@ENST00000438431 | ||
}} | }} |
Latest revision as of 11:56, 23 July 2015
Short description: | p1@ENST00000438431 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000438431_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | -216bp_to_ENST00000438431_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glomerular endothelial cell | 5.73e-08 | 5 |
lymphangioblast | 8.97e-07 | 6 |
endothelial cell of lymphatic vessel | 8.97e-07 | 6 |
vascular lymphangioblast | 8.97e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
testis | 1.33e-17 | 8 |
male reproductive organ | 4.25e-13 | 11 |
gonad | 2.52e-07 | 21 |
indifferent external genitalia | 2.52e-07 | 21 |
indifferent gonad | 2.52e-07 | 21 |
gonad primordium | 2.52e-07 | 21 |
external genitalia | 4.94e-07 | 22 |
male organism | 4.94e-07 | 22 |
male reproductive system | 4.94e-07 | 22 |