FFCP PHASE1:Hg19::chr10:1594944..1594976,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:1594944..1594976,+ | |||
|coexpression_cluster_id=C31 | |coexpression_cluster_id=C31 | ||
|description=CAGE_peak_at_chr10:1594944..1594976,+ | |description=CAGE_peak_at_chr10:1594944..1594976,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008814;1.33e-15;2!UBERON:0010056;1.33e-15;2 | |ontology_enrichment_development_v019=UBERON:0008814;1.33e-15;2!UBERON:0010056;1.33e-15;2 | ||
|ontology_enrichment_disease=DOID:4960!2.25e-16!1;DOID:0070004!2.25e-16!1 | |ontology_enrichment_disease=DOID:4960!2.25e-16!1;DOID:0070004!2.25e-16!1 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000341!1.17e-31!2;UBERON:0003127!2.97e-31!2;UBERON:0001723!7.68e-22!3;UBERON:0001033!7.68e-22!3;UBERON:0010056!7.68e-22!3;UBERON:0002426!6.47e-17!1;UBERON:0003831!6.47e-17!1;UBERON:0003898!6.47e-17!1;UBERON:0004830!6.47e-17!1;UBERON:0001774!6.47e-17!1;UBERON:0003830!6.47e-17!1;UBERON:0005175!6.47e-17!1;UBERON:0003897!6.47e-17!1;UBERON:0001103!6.47e-17!1;UBERON:0010084!6.47e-17!1;UBERON:0008814!6.39e-10!15;UBERON:0003126!1.18e-09!7;UBERON:0001005!1.18e-09!7;UBERON:0001630!4.02e-09!2;UBERON:0005090!4.02e-09!2;UBERON:0003103!9.10e-08!69;UBERON:0001042!3.33e-07!10;UBERON:0009145!3.33e-07!10;UBERON:0000974!4.26e-07!10 | |ontology_enrichment_uberon=UBERON:0000341!1.17e-31!2;UBERON:0003127!2.97e-31!2;UBERON:0001723!7.68e-22!3;UBERON:0001033!7.68e-22!3;UBERON:0010056!7.68e-22!3;UBERON:0002426!6.47e-17!1;UBERON:0003831!6.47e-17!1;UBERON:0003898!6.47e-17!1;UBERON:0004830!6.47e-17!1;UBERON:0001774!6.47e-17!1;UBERON:0003830!6.47e-17!1;UBERON:0005175!6.47e-17!1;UBERON:0003897!6.47e-17!1;UBERON:0001103!6.47e-17!1;UBERON:0010084!6.47e-17!1;UBERON:0008814!6.39e-10!15;UBERON:0003126!1.18e-09!7;UBERON:0001005!1.18e-09!7;UBERON:0001630!4.02e-09!2;UBERON:0005090!4.02e-09!2;UBERON:0003103!9.10e-08!69;UBERON:0001042!3.33e-07!10;UBERON:0009145!3.33e-07!10;UBERON:0000974!4.26e-07!10 | ||
|ontology_enrichment_uberon_v019=UBERON:0000341;1.13e-56;2!UBERON:0001723;6.91e-39;3!UBERON:0001033;6.91e-39;3!UBERON:0002426;1.33e-29;1!UBERON:0003831;1.33e-29;1!UBERON:0003898;1.33e-29;1!UBERON:0004830;1.33e-29;1!UBERON:0003830;1.33e-29;1!UBERON:0005175;1.33e-29;1!UBERON:0001774;1.33e-29;1!UBERON:0001103;1.33e-29;1!UBERON:0000974;1.04e-19;6!UBERON:0005090;1.54e-15;2!UBERON:0001630;1.54e-15;2!UBERON:0003127;2.21e-15;2!UBERON:0001134;4.66e-08;16!UBERON:0002036;4.66e-08;16!UBERON:0000922;1.30e-07;49 | |ontology_enrichment_uberon_v019=UBERON:0000341;1.13e-56;2!UBERON:0001723;6.91e-39;3!UBERON:0001033;6.91e-39;3!UBERON:0002426;1.33e-29;1!UBERON:0003831;1.33e-29;1!UBERON:0003898;1.33e-29;1!UBERON:0004830;1.33e-29;1!UBERON:0003830;1.33e-29;1!UBERON:0005175;1.33e-29;1!UBERON:0001774;1.33e-29;1!UBERON:0001103;1.33e-29;1!UBERON:0000974;1.04e-19;6!UBERON:0005090;1.54e-15;2!UBERON:0001630;1.54e-15;2!UBERON:0003127;2.21e-15;2!UBERON:0001134;4.66e-08;16!UBERON:0002036;4.66e-08;16!UBERON:0000922;1.30e-07;49 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000341,1.13e-56,2;UBERON:0001723,6.91e-39,3;UBERON:0001033,6.91e-39,3;UBERON:0010056,6.91e-39,3;UBERON:0002426,1.33e-29,1;UBERON:0003831,1.33e-29,1;UBERON:0003898,1.33e-29,1;UBERON:0004830,1.33e-29,1;UBERON:0003830,1.33e-29,1;UBERON:0005175,1.33e-29,1;UBERON:0001774,1.33e-29,1;UBERON:0001103,1.33e-29,1;UBERON:0010084,1.33e-29,1;UBERON:0005090,1.54e-15,2;UBERON:0001630,1.54e-15,2;UBERON:0003127,1.78e-15,2;UBERON:0001042,1.89e-12,10;UBERON:0009145,1.89e-12,10;UBERON:0000974,2.98e-12,10;UBERON:0006562,2.07e-11,11;UBERON:0000153,8.30e-08,62;UBERON:0007811,8.30e-08,62;UBERON:0008814,2.44e-07,18;UBERON:0001557,5.34e-07,19 | |||
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|short_description=p@chr10:1594944..1594976,+ | |short_description=p@chr10:1594944..1594976,+ | ||
}} | }} |
Latest revision as of 12:08, 23 July 2015
Short description: | p@chr10:1594944..1594976, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:1594944..1594976, + |
Coexpression cluster: | C31_skeletal_tongue_diaphragm_throat_penis_skin_trachea |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
throat | 1.13e-56 | 2 |
tongue | 6.91e-39 | 3 |
gustatory system | 6.91e-39 | 3 |
future tongue | 6.91e-39 | 3 |
chest muscle | 1.33e-29 | 1 |
respiratory system muscle | 1.33e-29 | 1 |
skeletal muscle of trunk | 1.33e-29 | 1 |
respiratory system skeletal muscle | 1.33e-29 | 1 |
thoracic segment muscle | 1.33e-29 | 1 |
chest organ | 1.33e-29 | 1 |
muscle of trunk | 1.33e-29 | 1 |
diaphragm | 1.33e-29 | 1 |
future diaphragm | 1.33e-29 | 1 |
muscle structure | 1.54e-15 | 2 |
muscle organ | 1.54e-15 | 2 |
open tracheal system trachea | 1.78e-15 | 2 |
chordate pharynx | 1.89e-12 | 10 |
pharyngeal region of foregut | 1.89e-12 | 10 |
neck | 2.98e-12 | 10 |
pharynx | 2.07e-11 | 11 |
anterior region of body | 8.30e-08 | 62 |
craniocervical region | 8.30e-08 | 62 |
pharyngeal arch system | 2.44e-07 | 18 |
upper respiratory tract | 5.34e-07 | 19 |