FFCP PHASE1:Hg19::chr10:22218012..22218102,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:22218012..22218102,- | |||
|description=CAGE_peak_at_chr10:22218012..22218102,- | |description=CAGE_peak_at_chr10:22218012..22218102,- | ||
|id=chr10:22218012..22218102,- | |id=chr10:22218012..22218102,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000622;1.60e-11;5!CL:0000039;3.56e-10;7!CL:0000586;3.56e-10;7!CL:0000154;1.59e-09;6!CL:0000150;8.52e-09;9!CL:0002605;1.38e-08;3!CL:0002166;1.51e-08;3!CL:0000064;2.65e-08;3!CL:0000067;2.65e-08;3!CL:0005012;2.65e-08;3!CL:0002304;2.65e-08;3!CL:0002586;2.22e-07;3!CL:0002623;2.22e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000622,1.87e-11,5;CL:0000039,4.50e-10,7;CL:0000586,4.50e-10,7;CL:0000154,1.80e-09,6;CL:0000066,3.99e-09,253;CL:0000150,9.14e-09,9;CL:0002605,1.41e-08,3;CL:0002166,1.51e-08,3;CL:0000064,2.39e-08,3;CL:0000067,2.39e-08,3;CL:0005012,2.39e-08,3;CL:0002304,2.39e-08,3;CL:0000047,7.42e-08,8;CL:0002586,1.33e-07,3;CL:0000221,2.98e-07,72;CL:0002623,3.11e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007625!3.00e-08!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0007625;8.28e-20;11!UBERON:0010371;5.86e-15;31!UBERON:0001456;2.89e-11;21!UBERON:0000019;1.77e-10;19!UBERON:0000047;1.77e-10;19!UBERON:0004088;1.77e-10;19!UBERON:0010230;1.77e-10;19!UBERON:0000488;5.94e-10;4!UBERON:0000970;7.69e-10;20!UBERON:0002104;2.89e-09;21!UBERON:0001778;2.65e-08;3!UBERON:0001775;2.65e-08;3!UBERON:0000020;2.88e-08;23!UBERON:0001032;7.84e-08;24!UBERON:0004456;7.84e-08;24!UBERON:0001801;1.55e-07;14!UBERON:0001781;2.22e-07;3!UBERON:0001782;2.22e-07;3!UBERON:0006876;7.17e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007625,3.32e-20,11;UBERON:0005085,1.20e-11,31;UBERON:0001456,8.13e-11,22;UBERON:0000033,3.73e-10,56;UBERON:0000488,4.39e-10,4;UBERON:0000019,4.84e-10,20;UBERON:0000047,4.84e-10,20;UBERON:0010312,4.84e-10,20;UBERON:0004088,4.84e-10,20;UBERON:0010230,4.84e-10,20;UBERON:0003072,4.84e-10,20;UBERON:0004128,4.84e-10,20;UBERON:0003071,4.84e-10,20;UBERON:0000970,1.87e-09,21;UBERON:0002104,1.87e-09,21;UBERON:0000153,1.06e-08,62;UBERON:0007811,1.06e-08,62;UBERON:0001778,2.39e-08,3;UBERON:0001775,2.39e-08,3;UBERON:0004121,3.61e-08,171;UBERON:0000924,3.61e-08,171;UBERON:0006601,3.61e-08,171;UBERON:0001444,4.51e-08,49;UBERON:0000020,5.41e-08,24;UBERON:0001032,5.41e-08,24;UBERON:0004456,5.41e-08,24;UBERON:0001801,1.23e-07,14;UBERON:0001782,1.33e-07,3;UBERON:0005424,1.33e-07,3;UBERON:0000076,3.07e-07,8;UBERON:0006876,8.01e-07,11 | |||
|phase1_expression=0.363356758541113,0.642301571672949,0.281908808191942,0,0,0.872338524100369,0,0,0.261185628199839,0,0,0,0.527533956456907,0.247532705920093,0,0,0.602694528023977,0,0.487932798790507,0.369363174230364,0,0.626909442956176,39.5005662240858,6.43309797842556,19.8357370559788,0.152826811495903,0.328402357799783,0,0,0,0,0,0,0,0,0.142169232487422,0.293600439334847,0.553995408531877,0.401088894940283,0.651032612147555,0,0,0.515151135268373,0.290796477559129,0,0.242584061187816,0.464858073811369,0.411167888021826,0,0.28769239232215,0.768482119587302,0,0,0,0,0.564727018627814,0,0,0.306083892370903,0,1.91801137739712,0.659702600373432,0.199463657621632,0.852449501065388,0,0.56738522469114,0,0.75374599577023,2.08593167368081,0.434377689410233,0,0.368277635987565,0.632924774881769,0.422510572623884,0,0,0.112328631146495,0.150176892841506,0,0.570025487482497,0,0.365328307529268,0,0,0.889509253863555,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0.196709770113833,0.393010762749165,0.205601498999509,0,0,0,0,0.111410456885174,0,0.221533894583621,0.270803863765016,0.25618263945135,0.130059347559878,0.164437904603676,0,0,0,0,0,0.113309342697566,0,0.34362744548263,0,0,0.651083453856419,0,0,0,0,0,0,0.201606743224732,0.802320587350522,0.434473211648397,0,0.670700859703636,0.255725123687061,0,0,0,0,1.45990461090791,32.1418378357831,4.65631734671384,3.86473057049755,0.0654895377488563,0.364295288292542,0.370784442784429,0,0,0.531831842075461,0.238490624305342,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0.0892997282840798,0.22452937262617,0.225222960966644,0,0,0,0,0,0.436094052142534,0.496971951695318,0,0.397227542439656,0,0,0,0,0.49333509683432,0,0.404132016209064,0.490385709340376,0.151357427644931,0,0.234321431833797,0,0,0,0.117434498643765,0.161872944368132,0.140450806702248,0,0,0.103325781175765,0,0,0,0,0,0.125118519871964,0,0,0.30648779579902,0.300476117813194,0.113432183160021,0.358779271377724,0,0,0.900273288253207,0.103052529238439,0.257640540045629,0,0.506328996723799,0.292311015483596,0,0,0,0,0.10075209822764,0.339121184620975,0.386521706326594,1.36373060295417,0.286804595389004,0.609868530647977,0.132529768321485,2.5562667431294,6.63430752098371,0.504641701751257,0,0,0.643240938192885,0,0.464367928031979,0,0.473227200159376,0.337169380156203,0.241011029883482,0.882351781859152,0.871517776369625,0,0.539325232640658,0.196221465125346,0.769494313892781,0,0,0,0,1.26755034821831,0,1.77236972004421,0,0.368965315629341,1.71567810298526,14.8162885301645,0,0.402115889646523,0.648119116109707,0,0,2.88662684050547,30.3737661034701,0.469634776943287,0.144366447761074,0.462985512576611,0,0.790204397959275,1.71697232418975,0,0,0.594524649154913,15.9347517777521,24.8613549734312,8.08118054281603,3.67189943081678,1.16253575405585,0.383382679165211,0,0.088048434013226,0,0,0.12624243342638,0.063497894292169,0.381988425558278,0,0,0.205654985406647,0,0.285826432630578,0.112131084345361,0,0.22001485746285,0.258543431515556,0,0.845302752556,0,0,0,0,0,0.57191197463259,0,0,0,0.355391948742546,0,0,0,1.69954085009497,0,0,0,0.239624855491583,1.14861935834114,0,0.579125226670317,0.410952645100767,0,0,0.197030760201927,0.431255149719035,0.385029108839245,16.5161505744601,20.8223766172195,10.8260433788877,4.69045542936177,5.10351001322531,0.749007023947182,0,0,0.49076596687656,0,0.271265023699736,0.415941723061614,0.535286966391485,0.315404830067869,0.117141414992713,0.300946099727719,0,0,0,0,0,0,0,0,0.431428401637234,0.106727557803444,0.303127571446259,3.32870879020994,0,0,0.153461973288062,0.280660094433074,0.256278298511402,1.02341449813341,0.321707842287215,0,0,0.355123450626254,0.164254312027618,0,0.116210378459959,0.241718899183244,2.20557117333613,0.828728900423067,0,0.364182336013434,0.524497659837696,0,0.0770153371044148,0,0,0.211103257785751,0,0,1.0795795805107,0,0,0,0,0,0.447749509444357,0,0.522870902049801,3.84675187674584,1.96808787419823,2.27764876265012,0.206082023295445,9.065377017016,11.8813679885647,2.87132768998086,5.20048196829217,0,0,0.308097234229289,0.15350367472613,0,0.966782203814463,0.580066775656914,0.0852266274161009,0.445160178233687,0.165284915360978,0,0.127612712494584,0.708104465988849,0.464845549297286,0.31481234683064,0,0,0,0,0,0.143124886741991,1.116475108079,0.316379424718726,1.14378116354295,0,0,0,0,0.719489830333259,1.64722217841633,0.706874414074119,0.202182481573316,0,1.26377536871694,0,0.243713489631284,0,0,0.707027159768564,0,0,0,0,0,0,0,0.30982349809975,0,0.143411352204052,0.687743287091848,0,0,0.211107635297664,0,0,0,0.0962221127255121,0,0,0.188287601553558,0,0,0.443430153536676,0.689170200620878,0,0,0,0,0,0,0,0,0.640944426764839,0,0,0.185803175125719,0,0.0711418433484141,0,0,0.191505370132367,0.635020748171649,0,0.561594356226918,0,0,0,0.169291777801603,0,0.201799707191048,0.851692475380653,0.343505344755765,0.307240764308458,0,0.333698283423817,0.19538809540204,0,0,0,0.33307196799782,0,0,0.293016358543788,0.242721043499027,0.111443384277478,0,0,2.07875276582847,0,0,0.422008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| ||
|short_description=p@chr10:22218012..22218102,- | |short_description=p@chr10:22218012..22218102,- | ||
}} | }} |
Latest revision as of 12:33, 23 July 2015
Short description: | p@chr10:22218012..22218102, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:22218012..22218102, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell | 1.87e-11 | 5 |
germ line cell | 4.50e-10 | 7 |
germ cell | 4.50e-10 | 7 |
protein secreting cell | 1.80e-09 | 6 |
epithelial cell | 3.99e-09 | 253 |
glandular epithelial cell | 9.14e-09 | 9 |
astrocyte of the cerebral cortex | 1.41e-08 | 3 |
epithelial cell of Malassez | 1.51e-08 | 3 |
ciliated cell | 2.39e-08 | 3 |
ciliated epithelial cell | 2.39e-08 | 3 |
multi-ciliated epithelial cell | 2.39e-08 | 3 |
non-pigmented ciliary epithelial cell | 2.39e-08 | 3 |
neuronal stem cell | 7.42e-08 | 8 |
retinal pigment epithelial cell | 1.33e-07 | 3 |
ectodermal cell | 2.98e-07 | 72 |
acinar cell of salivary gland | 3.11e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
pigment epithelium of eye | 3.32e-20 | 11 |
ectodermal placode | 1.20e-11 | 31 |
face | 8.13e-11 | 22 |
head | 3.73e-10 | 56 |
atypical epithelium | 4.39e-10 | 4 |
camera-type eye | 4.84e-10 | 20 |
simple eye | 4.84e-10 | 20 |
immature eye | 4.84e-10 | 20 |
ocular region | 4.84e-10 | 20 |
eyeball of camera-type eye | 4.84e-10 | 20 |
optic cup | 4.84e-10 | 20 |
optic vesicle | 4.84e-10 | 20 |
eye primordium | 4.84e-10 | 20 |
eye | 1.87e-09 | 21 |
visual system | 1.87e-09 | 21 |
anterior region of body | 1.06e-08 | 62 |
craniocervical region | 1.06e-08 | 62 |
ciliary epithelium | 2.39e-08 | 3 |
ciliary body | 2.39e-08 | 3 |
ectoderm-derived structure | 3.61e-08 | 171 |
ectoderm | 3.61e-08 | 171 |
presumptive ectoderm | 3.61e-08 | 171 |
subdivision of head | 4.51e-08 | 49 |
sense organ | 5.41e-08 | 24 |
sensory system | 5.41e-08 | 24 |
entire sense organ system | 5.41e-08 | 24 |
anterior segment of eyeball | 1.23e-07 | 14 |
pigmented layer of retina | 1.33e-07 | 3 |
presumptive retinal pigmented epithelium | 1.33e-07 | 3 |
external ectoderm | 3.07e-07 | 8 |
vasculature of organ | 8.01e-07 | 11 |