FFCP PHASE1:Hg19::chr10:24721920..24721944,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:24721920..24721944,+ to FFCP PHASE1:Hg19::chr10:24721920..24721944,+: NSchange) |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:24721920..24721944,+ | |||
|description=CAGE_peak_at_chr10:24721920..24721944,+ | |||
|id=chr10:24721920..24721944,+ | |||
|ontology_enrichment_celltype=CL:0000223!3.41e-07!59;CL:0002076!8.16e-07!43 | |||
|ontology_enrichment_celltype_v019=CL:0002563;5.07e-10;4!CL:0002251;2.99e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,5.31e-10,4;CL:0002251,2.85e-07,20 | |||
|ontology_enrichment_development_v019=UBERON:0005754;2.37e-10;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.04e-10!115;UBERON:0003135!7.17e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0000998;2.37e-10;1!UBERON:0006868;2.37e-10;1!UBERON:0001242;5.07e-10;4!UBERON:0001262;5.07e-10;4!UBERON:0004786;5.07e-10;4!UBERON:0004808;5.07e-10;4!UBERON:0001277;5.07e-10;4!UBERON:0001389;6.05e-10;1!UBERON:0000026;6.05e-10;1!UBERON:0008784;6.05e-10;1!UBERON:0006058;6.05e-10;1!UBERON:0003663;6.05e-10;1!UBERON:0004256;6.05e-10;1!UBERON:0004708;6.05e-10;1!UBERON:0002101;6.05e-10;1!UBERON:0004709;6.05e-10;1!UBERON:0002529;6.05e-10;1!UBERON:0010538;6.05e-10;1!UBERON:0003661;6.05e-10;1!UBERON:0010890;6.05e-10;1!UBERON:0002471;6.05e-10;1!UBERON:0001383;6.05e-10;1!UBERON:0010758;6.05e-10;1!UBERON:0010707;6.05e-10;1!UBERON:0000978;6.05e-10;1!UBERON:0002103;6.05e-10;1!UBERON:0001665;6.05e-10;1!UBERON:0003823;6.05e-10;1!UBERON:0000154;6.05e-10;1!UBERON:0010709;6.05e-10;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000998,2.16e-10,1;UBERON:0006868,2.16e-10,1;UBERON:0005418,3.40e-10,1;UBERON:0001389,3.40e-10,1;UBERON:0000026,3.40e-10,1;UBERON:0008784,3.40e-10,1;UBERON:0006058,3.40e-10,1;UBERON:0003663,3.40e-10,1;UBERON:0004256,3.40e-10,1;UBERON:0004708,3.40e-10,1;UBERON:0002101,3.40e-10,1;UBERON:0004709,3.40e-10,1;UBERON:0002529,3.40e-10,1;UBERON:0010538,3.40e-10,1;UBERON:0003661,3.40e-10,1;UBERON:0010890,3.40e-10,1;UBERON:0002471,3.40e-10,1;UBERON:0001383,3.40e-10,1;UBERON:0004357,3.40e-10,1;UBERON:0004347,3.40e-10,1;UBERON:0005420,3.40e-10,1;UBERON:0005732,3.40e-10,1;UBERON:0010758,3.40e-10,1;UBERON:0010707,3.40e-10,1;UBERON:0000978,3.40e-10,1;UBERON:0002103,3.40e-10,1;UBERON:0001665,3.40e-10,1;UBERON:0003823,3.40e-10,1;UBERON:0000154,3.40e-10,1;UBERON:0010709,3.40e-10,1;UBERON:0005733,3.40e-10,1;UBERON:0005730,3.40e-10,1;UBERON:0001242,5.31e-10,4;UBERON:0001262,5.31e-10,4;UBERON:0004786,5.31e-10,4;UBERON:0004808,5.31e-10,4;UBERON:0001277,5.31e-10,4 | |||
|phase1_expression=0,0.856402095563933,0,0,0,0,0,0,0,0,0,0.436882744260345,0,0,0,0.672325146451775,0,0,0,0.123121058076788,0,0,0,1.23186982565596,0.376627918784408,0.305653622991805,0.0821005894499457,0.393553906568396,0,0,0,0,0.30120591877825,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263504357079378,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0.825354125820202,0,0.516833518338658,0,0.33472061276467,0.402829317109147,0,0.732186172644509,0,0,0,0,0.225222960966644,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0.24666754841716,0,0.134710672069688,0,0,0,0,0,0,0,0.117434498643765,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0.355009592516614,0,0,0.386521706326594,0.545492241181669,0.286804595389004,0.487894824518382,0.132529768321485,0.116193942869518,0.207322110030741,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0.590789906681404,0,2.33678033231916,0,0.109750285408626,1.1240175325762,0.100528972411631,0.370353780634118,0,0,0,0.115930404975077,0.117408694235822,0.144366447761074,0,0,0,0,0,0,0,0,0,0.283550194484773,0.179117045405697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.22001485746285,0,0,0,0,0,0,0,0,0.142977993658148,0.542621605391443,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0.415941723061614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0.177561725313127,0.98552587216571,0.519254429183621,0.116210378459959,0.846016147141356,0.200506470303285,0.276242966807689,0,0,0,0,0.0770153371044148,0,0,0,1.13733384070897,0.510281115829547,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0.103041011647722,0,0,0,0.650060246036521,0,0.096670718292122,0.154048617114644,0.15350367472613,0.137836572484531,0.214840489736547,0.145016693914229,0.255679882248303,0.0890320356467374,0.495854746082934,0.384380134730212,0.127612712494584,0.4046311234222,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423347165447766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0.222886768554957,0,0.47748896947538,0.296964680832639,0.614321404198464,0.994147647766298,0.281338832821026,0.333926115068718,0.659215496907038,0,0.597743964753209,0,0,0,0.369254416383208,0,1.07842021376792,0,0,0.394573622547734,0,0,0,0.371072392647405,0,0.260427761085233,0.174919999992391,0.724999575434793,0.455173793141999,0.254253650292766,0,0,0,0,0,0.241192877250816,0,0.110579259931225,0.295547618953547,0,0,0.278847488557207,0.230850775511391,0.113942055847001,0,1.97466817701499,0.217294743844016,0.31900115973192,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0.326465616318295,7.06765357169704,0,0,0,0,0,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0.867798691675654,0.0979923974143777,0,0.698906672968121,0,0,0,0,0.387956065953678,0,1.35588444468319,0.137041924646751,0.794858446811959,0.0633107959558787,0.391102765469606,2.88571752905521,0.426905989478705,0,0,0.114536596165916,0,0,0.124252535565433,0.707082103850386,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0.429226048136571,0,0.268733889946905,0,0,0.236349546921671,0.741742725430498,0.202210631562555,0,0.0846733320657845,0.795229689809303,0.136203406111576,0,0.550157746388935,2.07720169014593,0,0,0.242998226632099,0,0,0.472091293214983,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0.453248366080503,0,0,0.129282956361551,0,0,0,0.320362237703084,0.157204305099666,0,0,0.197611631897944,0.243585196761792,0,0,0,0,0.327872630709804,0,0,3.90484047686282,0,1.14681839138014,0.332787154610557,0.0620964029413835,0.138348634936231,0.249960815924213,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0.463044948647668,0,0,0.308801447160972,0,0.176689145945881,0.192914038270915,0.168942440653073,0,0,0,0,0,0,0,0,0.491545817507439,0.211312123358627,0,0,0,0,0,0.139879507719444,0,0,0,0.314531883711793,0,0,0.212574920101683,1.11542187833102,0,0.318004350653419,0,0.80057074828547,0,0,0,0,0.638535436228605,0,0,0.207471757392654,0.484426936895553,0,0.196295437002051,0,1.28400018965175,0.115525666150338,0,0,0.198916222116275,0.0752103283492573,0,0,0.523813388962845,0,0.443568258651136,0.135075169236789,0,0.826747186004736,0.126831620387814,0,0,0.496211178389294,0.703484977438482,0.127762427639595,0,0,0,0,0.0887023701626388,0.115233987555779,0,0.271878931907327,0.591954962065642,0,0,0.313972371402056,0.628462359664008,0,0,0,0.47775168788705,0.214429632529969,0.158013611732727,0,0,0,0.828864656652147,1.19502933965765,0,0,0,0,2.54032230114557,0.22910686854405,0,0,0.559277158988962,0.098150233615243,0,1.94228651156368,0.307988420568741,1.1598144313382,0,0,0,0,0.11294608203896,0,0.150962843566674,0,0.437119121007915,0,0.245148321753905,0,0.392616934229891,0,0.4226557275834,0,0.0939839179798536,0.0644578879735772,0,0.178553938605658,1.05868461514708,0,0,0.458729283404541,0,0.315543124386369,0.339957450954573,0,0.5290268405154,0.371995018166751,0,0,0.252332849670158,0.437062287854782,0.126698501011437,0.305966489225945,0.26721740526556,0.918948995348449,1.50424523575425,0.454672189309436,0.803892390468535,0,0,0.426467963801962,1.1903221573187,0.0645889098360061,0.248298857183432,0.112131862580613,0.636471582781649,1.21270313374932,2.39488422686657,0.342233301085281,0.134704106029175,0.143444410785353,0.99798106963804,0.0814032686109745,0,0,0,0,0,0,0.665756774185513,0.201273793591026,0 | |phase1_expression=0,0.856402095563933,0,0,0,0,0,0,0,0,0,0.436882744260345,0,0,0,0.672325146451775,0,0,0,0.123121058076788,0,0,0,1.23186982565596,0.376627918784408,0.305653622991805,0.0821005894499457,0.393553906568396,0,0,0,0,0.30120591877825,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263504357079378,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0.825354125820202,0,0.516833518338658,0,0.33472061276467,0.402829317109147,0,0.732186172644509,0,0,0,0,0.225222960966644,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0.24666754841716,0,0.134710672069688,0,0,0,0,0,0,0,0.117434498643765,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0.355009592516614,0,0,0.386521706326594,0.545492241181669,0.286804595389004,0.487894824518382,0.132529768321485,0.116193942869518,0.207322110030741,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0.590789906681404,0,2.33678033231916,0,0.109750285408626,1.1240175325762,0.100528972411631,0.370353780634118,0,0,0,0.115930404975077,0.117408694235822,0.144366447761074,0,0,0,0,0,0,0,0,0,0.283550194484773,0.179117045405697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.22001485746285,0,0,0,0,0,0,0,0,0.142977993658148,0.542621605391443,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0.415941723061614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0.177561725313127,0.98552587216571,0.519254429183621,0.116210378459959,0.846016147141356,0.200506470303285,0.276242966807689,0,0,0,0,0.0770153371044148,0,0,0,1.13733384070897,0.510281115829547,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0.103041011647722,0,0,0,0.650060246036521,0,0.096670718292122,0.154048617114644,0.15350367472613,0.137836572484531,0.214840489736547,0.145016693914229,0.255679882248303,0.0890320356467374,0.495854746082934,0.384380134730212,0.127612712494584,0.4046311234222,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423347165447766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0.222886768554957,0,0.47748896947538,0.296964680832639,0.614321404198464,0.994147647766298,0.281338832821026,0.333926115068718,0.659215496907038,0,0.597743964753209,0,0,0,0.369254416383208,0,1.07842021376792,0,0,0.394573622547734,0,0,0,0.371072392647405,0,0.260427761085233,0.174919999992391,0.724999575434793,0.455173793141999,0.254253650292766,0,0,0,0,0,0.241192877250816,0,0.110579259931225,0.295547618953547,0,0,0.278847488557207,0.230850775511391,0.113942055847001,0,1.97466817701499,0.217294743844016,0.31900115973192,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0.326465616318295,7.06765357169704,0,0,0,0,0,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0.867798691675654,0.0979923974143777,0,0.698906672968121,0,0,0,0,0.387956065953678,0,1.35588444468319,0.137041924646751,0.794858446811959,0.0633107959558787,0.391102765469606,2.88571752905521,0.426905989478705,0,0,0.114536596165916,0,0,0.124252535565433,0.707082103850386,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0.429226048136571,0,0.268733889946905,0,0,0.236349546921671,0.741742725430498,0.202210631562555,0,0.0846733320657845,0.795229689809303,0.136203406111576,0,0.550157746388935,2.07720169014593,0,0,0.242998226632099,0,0,0.472091293214983,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0.453248366080503,0,0,0.129282956361551,0,0,0,0.320362237703084,0.157204305099666,0,0,0.197611631897944,0.243585196761792,0,0,0,0,0.327872630709804,0,0,3.90484047686282,0,1.14681839138014,0.332787154610557,0.0620964029413835,0.138348634936231,0.249960815924213,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0.463044948647668,0,0,0.308801447160972,0,0.176689145945881,0.192914038270915,0.168942440653073,0,0,0,0,0,0,0,0,0.491545817507439,0.211312123358627,0,0,0,0,0,0.139879507719444,0,0,0,0.314531883711793,0,0,0.212574920101683,1.11542187833102,0,0.318004350653419,0,0.80057074828547,0,0,0,0,0.638535436228605,0,0,0.207471757392654,0.484426936895553,0,0.196295437002051,0,1.28400018965175,0.115525666150338,0,0,0.198916222116275,0.0752103283492573,0,0,0.523813388962845,0,0.443568258651136,0.135075169236789,0,0.826747186004736,0.126831620387814,0,0,0.496211178389294,0.703484977438482,0.127762427639595,0,0,0,0,0.0887023701626388,0.115233987555779,0,0.271878931907327,0.591954962065642,0,0,0.313972371402056,0.628462359664008,0,0,0,0.47775168788705,0.214429632529969,0.158013611732727,0,0,0,0.828864656652147,1.19502933965765,0,0,0,0,2.54032230114557,0.22910686854405,0,0,0.559277158988962,0.098150233615243,0,1.94228651156368,0.307988420568741,1.1598144313382,0,0,0,0,0.11294608203896,0,0.150962843566674,0,0.437119121007915,0,0.245148321753905,0,0.392616934229891,0,0.4226557275834,0,0.0939839179798536,0.0644578879735772,0,0.178553938605658,1.05868461514708,0,0,0.458729283404541,0,0.315543124386369,0.339957450954573,0,0.5290268405154,0.371995018166751,0,0,0.252332849670158,0.437062287854782,0.126698501011437,0.305966489225945,0.26721740526556,0.918948995348449,1.50424523575425,0.454672189309436,0.803892390468535,0,0,0.426467963801962,1.1903221573187,0.0645889098360061,0.248298857183432,0.112131862580613,0.636471582781649,1.21270313374932,2.39488422686657,0.342233301085281,0.134704106029175,0.143444410785353,0.99798106963804,0.0814032686109745,0,0,0,0,0,0,0.665756774185513,0.201273793591026,0 | ||
|short_description=p@chr10:24721920..24721944,+ | |||
}} | }} |
Latest revision as of 12:43, 23 July 2015
Short description: | p@chr10:24721920..24721944, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:24721920..24721944, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 5.31e-10 | 4 |
epithelial cell of alimentary canal | 2.85e-07 | 20 |