FFCP PHASE1:Hg19::chr10:31071229..31071236,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:31071229..31071236,+ | |||
|description=CAGE_peak_at_chr10:31071229..31071236,+ | |description=CAGE_peak_at_chr10:31071229..31071236,+ | ||
|id=chr10:31071229..31071236,+ | |id=chr10:31071229..31071236,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000346;1.95e-21;3!CL:1000428;1.95e-21;3!CL:0000228;1.65e-16;1!CL:0002372;1.65e-16;1!CL:0000333;2.52e-13;5!CL:0002559;2.85e-13;5!CL:0002551;2.36e-11;6!CL:0002321;7.90e-10;15!CL:0002363;6.42e-09;2!CL:0002367;6.42e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000346,1.29e-21,3;CL:1000428,1.29e-21,3;CL:0000228,1.04e-16,1;CL:0002372,1.04e-16,1;CL:0002559,2.23e-13,5;CL:0002551,2.36e-11,6;CL:0000333,5.81e-09,41;CL:0002367,8.09e-09,2;CL:0002363,8.74e-09,2;CL:0000008,8.74e-09,2 | |||
|ontology_enrichment_development_v019=CL:0000008;6.42e-09;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:169;2.90e-11;6!DOID:171;4.13e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:169,2.62e-11,6;DOID:171,3.89e-07,10 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0002067;9.96e-28;9!UBERON:0000412;1.95e-21;3!UBERON:0001992;1.95e-21;3!UBERON:0000013;2.52e-13;5!UBERON:0002410;2.52e-13;5!UBERON:0002073;2.85e-13;5!UBERON:0003566;6.42e-09;2!UBERON:0001777;6.42e-09;2!UBERON:0005969;6.42e-09;2!UBERON:0003956;6.42e-09;2!UBERON:0000010;8.31e-08;8!UBERON:0003102;5.53e-07;50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002067,7.57e-28,9;UBERON:0004016,7.57e-28,9;UBERON:0010083,7.57e-28,9;UBERON:0000412,1.29e-21,3;UBERON:0001992,1.29e-21,3;UBERON:0002073,2.23e-13,5;UBERON:0000013,2.23e-13,5;UBERON:0002410,2.23e-13,5;UBERON:0005086,2.23e-13,5;UBERON:0005969,8.09e-09,2;UBERON:0003956,8.09e-09,2;UBERON:0003566,8.74e-09,2;UBERON:0001777,8.74e-09,2;UBERON:0005085,3.73e-08,31;UBERON:0000010,7.77e-08,8 | |||
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| ||
|short_description=p@chr10:31071229..31071236,+ | |short_description=p@chr10:31071229..31071236,+ | ||
}} | }} |
Latest revision as of 13:11, 23 July 2015
Short description: | p@chr10:31071229..31071236, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:31071229..31071236, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hair follicle dermal papilla cell | 1.29e-21 | 3 |
stem cell of epidermis | 1.29e-21 | 3 |
multinucleate cell | 1.04e-16 | 1 |
myotube | 1.04e-16 | 1 |
hair follicle cell | 2.23e-13 | 5 |
fibroblast of dermis | 2.36e-11 | 6 |
migratory neural crest cell | 5.81e-09 | 41 |
trabecular meshwork cell | 8.09e-09 | 2 |
keratocyte | 8.74e-09 | 2 |
migratory cranial neural crest cell | 8.74e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
dermis | 7.57e-28 | 9 |
dermatome | 7.57e-28 | 9 |
future dermis | 7.57e-28 | 9 |
dermal papilla | 1.29e-21 | 3 |
papillary layer of dermis | 1.29e-21 | 3 |
hair follicle | 2.23e-13 | 5 |
sympathetic nervous system | 2.23e-13 | 5 |
autonomic nervous system | 2.23e-13 | 5 |
hair follicle placode | 2.23e-13 | 5 |
reticulum trabeculare | 8.09e-09 | 2 |
aqueous drainage system | 8.09e-09 | 2 |
head connective tissue | 8.74e-09 | 2 |
substantia propria of cornea | 8.74e-09 | 2 |
ectodermal placode | 3.73e-08 | 31 |
peripheral nervous system | 7.77e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 2.62e-11 | 6 |
neuroectodermal tumor | 3.89e-07 | 10 |