FFCP PHASE1:Hg19::chr10:31071229..31071236,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:31071229..31071236,+ | |||
|description=CAGE_peak_at_chr10:31071229..31071236,+ | |description=CAGE_peak_at_chr10:31071229..31071236,+ | ||
|id=chr10:31071229..31071236,+ | |id=chr10:31071229..31071236,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000346;1.95e-21;3!CL:1000428;1.95e-21;3!CL:0000228;1.65e-16;1!CL:0002372;1.65e-16;1!CL:0000333;2.52e-13;5!CL:0002559;2.85e-13;5!CL:0002551;2.36e-11;6!CL:0002321;7.90e-10;15!CL:0002363;6.42e-09;2!CL:0002367;6.42e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000346,1.29e-21,3;CL:1000428,1.29e-21,3;CL:0000228,1.04e-16,1;CL:0002372,1.04e-16,1;CL:0002559,2.23e-13,5;CL:0002551,2.36e-11,6;CL:0000333,5.81e-09,41;CL:0002367,8.09e-09,2;CL:0002363,8.74e-09,2;CL:0000008,8.74e-09,2 | |||
|ontology_enrichment_development_v019=CL:0000008;6.42e-09;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:169;2.90e-11;6!DOID:171;4.13e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:169,2.62e-11,6;DOID:171,3.89e-07,10 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0002067;9.96e-28;9!UBERON:0000412;1.95e-21;3!UBERON:0001992;1.95e-21;3!UBERON:0000013;2.52e-13;5!UBERON:0002410;2.52e-13;5!UBERON:0002073;2.85e-13;5!UBERON:0003566;6.42e-09;2!UBERON:0001777;6.42e-09;2!UBERON:0005969;6.42e-09;2!UBERON:0003956;6.42e-09;2!UBERON:0000010;8.31e-08;8!UBERON:0003102;5.53e-07;50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002067,7.57e-28,9;UBERON:0004016,7.57e-28,9;UBERON:0010083,7.57e-28,9;UBERON:0000412,1.29e-21,3;UBERON:0001992,1.29e-21,3;UBERON:0002073,2.23e-13,5;UBERON:0000013,2.23e-13,5;UBERON:0002410,2.23e-13,5;UBERON:0005086,2.23e-13,5;UBERON:0005969,8.09e-09,2;UBERON:0003956,8.09e-09,2;UBERON:0003566,8.74e-09,2;UBERON:0001777,8.74e-09,2;UBERON:0005085,3.73e-08,31;UBERON:0000010,7.77e-08,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.522371256399677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.164201178899891,0.393553906568396,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0,0.221729397462564,0,0,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0.149448680551801,0.939475989150119,2.26622122115384,2.80901613404497,0,0.122834317311768,0,0,0,0,0,0.168336113954066,0.875829639103749,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0.252433774244115,0.184099797284599,0,0,0,0.169560592310488,0,0,0,0.121973706129595,0,0,0.207322110030741,0.252320850875628,0,1.56449532329816,0,2.76269842704961,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03993478527958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0.12624243342638,0,0,0,0,0,0,0,0,0.43596006883328,0.07333828582095,0.129271715757778,0,0.845302752556,0,0,0,0,0,0.142977993658148,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,1.42636905040718,0,0,0.179060963239896,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260650843404249,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.925258162815933,0.355123450626254,0.164254312027618,0.519254429183621,0.232420756919918,0,0,0,0,0,0,0,0,0.784349769176855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0.096670718292122,0.308097234229289,0,0.551346289938122,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.75894634753143,1.04980416073495,0,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.427296284509893,0,0,0,0.144269212976445,0.0711418433484141,0.318852545457645,0.199579371432817,0,0,0,0,0,0,0,0,0.1605880751037,0,0.851692475380653,0,0,0,0.166849141711909,0.390776190804081,0,0,0,0.33307196799782,0,0,0,0,0,0.568272293612826,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,0.455173793141999,0,0,0,0.291604613383254,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0.0897576444097721,0,0,0.366390373607449,0,0,0,0,0,0,0,1.13852239634511,0,0,0,0.282706142867882,0,0,0,0,0.296521128680622,0.123563938946503,0,0,0.802577647298789,0.468528891450678,0.182454789215666,0,0,0,0,0,0.063186579628488,0.150323419414493,0,0,0,0,1.19472429772959,0,0,0.173559738335131,0,0.0870592065804026,0,0.343972064943233,0,0,0.0821154570532092,0.0969890164884194,0,0,0,0,0,0,0.0801588202515337,0.85381197895741,0,0.144090417154106,0,0.171594997861965,0.14405479798815,0,0,0.67952103036807,0.732219924186332,0,0,0,0,0,0,1.05154941711726,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0.136203406111576,0,0,0,0.449947783103001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492555124496034,0,0,0,0,0,0,0,0,0,0,0,0,0.197611631897944,0,0.638341257770182,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0.597019211547496,0.701139929541673,1.10961172300523,0,0,0,0,0,0.466311601748341,0,0,0,0.155262956876259,0,0,0.521745061811734,0,0,0,0.181848659202559,0,0,0.796191777397232,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0.163565394255844,0,0,0.211312123358627,0,0.106691729694141,0,0,0.184105950251841,0,0,7.80155664952275,0.107824811396682,0,1.41972529649618,0,0.425149840203366,0.123935764259002,0,0,0,0,0,0.6124909547064,0.0642292250964595,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0,0,0,0,0,0.295712172434091,0,0,0,0.0634158101939068,0,0,0,0.175871244359621,0.127762427639595,0,0,0,0,0,0.230467975111559,0,0,0.0657727735628491,0.118193840883968,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0.340853619036631,0,0,0,0,0,0,0,0,0,0,0.971421986118279,0,0.198950775161368,0,0,0,0,0.0771741581079447,0.437119121007915,0,0.245148321753905,0,0,0,0,0,0,0,0.0999411559249289,0,0,0,0,0,0.143339583151451,0.157771562193185,0.0679914901909147,0,0.5290268405154,0,0,0,0,0.655593431782173,0,0.101988829741982,0,0,0,0,0,0,0,0.213233981900981,0.23806443146374,0,0,0.448527450322454,0,0,0.217716747896961,0.342233301085281,0.0673520530145875,0,0,0.0814032686109745,0,0,0,0,0.122241444182866,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0.522371256399677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.164201178899891,0.393553906568396,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0,0.221729397462564,0,0,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0.149448680551801,0.939475989150119,2.26622122115384,2.80901613404497,0,0.122834317311768,0,0,0,0,0,0.168336113954066,0.875829639103749,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0.252433774244115,0.184099797284599,0,0,0,0.169560592310488,0,0,0,0.121973706129595,0,0,0.207322110030741,0.252320850875628,0,1.56449532329816,0,2.76269842704961,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03993478527958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0.12624243342638,0,0,0,0,0,0,0,0,0.43596006883328,0.07333828582095,0.129271715757778,0,0.845302752556,0,0,0,0,0,0.142977993658148,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,1.42636905040718,0,0,0.179060963239896,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260650843404249,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.925258162815933,0.355123450626254,0.164254312027618,0.519254429183621,0.232420756919918,0,0,0,0,0,0,0,0,0.784349769176855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0.096670718292122,0.308097234229289,0,0.551346289938122,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.75894634753143,1.04980416073495,0,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.427296284509893,0,0,0,0.144269212976445,0.0711418433484141,0.318852545457645,0.199579371432817,0,0,0,0,0,0,0,0,0.1605880751037,0,0.851692475380653,0,0,0,0.166849141711909,0.390776190804081,0,0,0,0.33307196799782,0,0,0,0,0,0.568272293612826,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,0.455173793141999,0,0,0,0.291604613383254,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0.0897576444097721,0,0,0.366390373607449,0,0,0,0,0,0,0,1.13852239634511,0,0,0,0.282706142867882,0,0,0,0,0.296521128680622,0.123563938946503,0,0,0.802577647298789,0.468528891450678,0.182454789215666,0,0,0,0,0,0.063186579628488,0.150323419414493,0,0,0,0,1.19472429772959,0,0,0.173559738335131,0,0.0870592065804026,0,0.343972064943233,0,0,0.0821154570532092,0.0969890164884194,0,0,0,0,0,0,0.0801588202515337,0.85381197895741,0,0.144090417154106,0,0.171594997861965,0.14405479798815,0,0,0.67952103036807,0.732219924186332,0,0,0,0,0,0,1.05154941711726,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0.136203406111576,0,0,0,0.449947783103001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492555124496034,0,0,0,0,0,0,0,0,0,0,0,0,0.197611631897944,0,0.638341257770182,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0.597019211547496,0.701139929541673,1.10961172300523,0,0,0,0,0,0.466311601748341,0,0,0,0.155262956876259,0,0,0.521745061811734,0,0,0,0.181848659202559,0,0,0.796191777397232,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0.163565394255844,0,0,0.211312123358627,0,0.106691729694141,0,0,0.184105950251841,0,0,7.80155664952275,0.107824811396682,0,1.41972529649618,0,0.425149840203366,0.123935764259002,0,0,0,0,0,0.6124909547064,0.0642292250964595,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0,0,0,0,0,0.295712172434091,0,0,0,0.0634158101939068,0,0,0,0.175871244359621,0.127762427639595,0,0,0,0,0,0.230467975111559,0,0,0.0657727735628491,0.118193840883968,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0.340853619036631,0,0,0,0,0,0,0,0,0,0,0.971421986118279,0,0.198950775161368,0,0,0,0,0.0771741581079447,0.437119121007915,0,0.245148321753905,0,0,0,0,0,0,0,0.0999411559249289,0,0,0,0,0,0.143339583151451,0.157771562193185,0.0679914901909147,0,0.5290268405154,0,0,0,0,0.655593431782173,0,0.101988829741982,0,0,0,0,0,0,0,0.213233981900981,0.23806443146374,0,0,0.448527450322454,0,0,0.217716747896961,0.342233301085281,0.0673520530145875,0,0,0.0814032686109745,0,0,0,0,0.122241444182866,0,0,0,0 | ||
|short_description=p@chr10:31071229..31071236,+ | |short_description=p@chr10:31071229..31071236,+ | ||
}} | }} |
Latest revision as of 13:11, 23 July 2015
Short description: | p@chr10:31071229..31071236, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:31071229..31071236, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hair follicle dermal papilla cell | 1.29e-21 | 3 |
stem cell of epidermis | 1.29e-21 | 3 |
multinucleate cell | 1.04e-16 | 1 |
myotube | 1.04e-16 | 1 |
hair follicle cell | 2.23e-13 | 5 |
fibroblast of dermis | 2.36e-11 | 6 |
migratory neural crest cell | 5.81e-09 | 41 |
trabecular meshwork cell | 8.09e-09 | 2 |
keratocyte | 8.74e-09 | 2 |
migratory cranial neural crest cell | 8.74e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
dermis | 7.57e-28 | 9 |
dermatome | 7.57e-28 | 9 |
future dermis | 7.57e-28 | 9 |
dermal papilla | 1.29e-21 | 3 |
papillary layer of dermis | 1.29e-21 | 3 |
hair follicle | 2.23e-13 | 5 |
sympathetic nervous system | 2.23e-13 | 5 |
autonomic nervous system | 2.23e-13 | 5 |
hair follicle placode | 2.23e-13 | 5 |
reticulum trabeculare | 8.09e-09 | 2 |
aqueous drainage system | 8.09e-09 | 2 |
head connective tissue | 8.74e-09 | 2 |
substantia propria of cornea | 8.74e-09 | 2 |
ectodermal placode | 3.73e-08 | 31 |
peripheral nervous system | 7.77e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 2.62e-11 | 6 |
neuroectodermal tumor | 3.89e-07 | 10 |