FFCP PHASE1:Hg19::chr10:33247025..33247030,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:33247025..33247030,+ | |||
|description=CAGE_peak_at_chr10:33247025..33247030,+ | |description=CAGE_peak_at_chr10:33247025..33247030,+ | ||
|id=chr10:33247025..33247030,+ | |id=chr10:33247025..33247030,+ | ||
|ontology_enrichment_celltype=CL:0000359!4.68e-10!32;CL:0000548!9.19e-09!679;CL:0000004!9.19e-09!679;CL:0000255!9.19e-09!679;CL:0002057!1.33e-08!42;CL:0000012!1.55e-08!682;CL:0000860!2.36e-08!45 | |ontology_enrichment_celltype=CL:0000359!4.68e-10!32;CL:0000548!9.19e-09!679;CL:0000004!9.19e-09!679;CL:0000255!9.19e-09!679;CL:0002057!1.33e-08!42;CL:0000012!1.55e-08!682;CL:0000860!2.36e-08!45 | ||
|ontology_enrichment_celltype_v019=CL:0002589;1.23e-15;2!CL:0000860;3.02e-12;33!CL:0002057;3.02e-12;33!CL:0002328;4.88e-11;3!CL:0000473;1.38e-09;39!CL:0000234;1.38e-09;39!CL:0002368;1.85e-09;13!CL:0002202;5.01e-08;9!CL:0002632;5.01e-08;9!CL:0000359;3.58e-07;32!CL:0002595;8.91e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002589,7.31e-16,2;CL:0002328,5.98e-11,3;CL:0000860,2.01e-10,42;CL:0002057,2.01e-10,42;CL:0002368,1.94e-09,13;CL:0000473,5.56e-09,48;CL:0000234,5.56e-09,48;CL:0002202,5.27e-08,9;CL:0002632,5.27e-08,9;CL:0000359,8.14e-08,32;CL:0002194,5.79e-07,59;CL:0000576,5.79e-07,59;CL:0000040,5.79e-07,59;CL:0000559,5.79e-07,59;CL:0002595,9.73e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002057;5.73e-07;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004573!7.45e-08!33;UBERON:0004571!7.45e-08!33;UBERON:0001637!1.12e-07!42;UBERON:0003509!1.12e-07!42;UBERON:0004572!1.12e-07!42;UBERON:0000926!1.74e-07!448;UBERON:0004120!1.74e-07!448;UBERON:0006603!1.74e-07!448;UBERON:0001981!9.08e-07!60;UBERON:0007500!9.08e-07!60;UBERON:0004537!9.08e-07!60;UBERON:0006965!9.08e-07!60 | |ontology_enrichment_uberon=UBERON:0004573!7.45e-08!33;UBERON:0004571!7.45e-08!33;UBERON:0001637!1.12e-07!42;UBERON:0003509!1.12e-07!42;UBERON:0004572!1.12e-07!42;UBERON:0000926!1.74e-07!448;UBERON:0004120!1.74e-07!448;UBERON:0006603!1.74e-07!448;UBERON:0001981!9.08e-07!60;UBERON:0007500!9.08e-07!60;UBERON:0004537!9.08e-07!60;UBERON:0006965!9.08e-07!60 | ||
|ontology_enrichment_uberon_v019=UBERON:0001529;1.23e-15;2!UBERON:0007204;1.23e-15;2!UBERON:0004815;4.88e-11;3!UBERON:0002031;4.88e-11;3!UBERON:0004573;2.30e-09;33!UBERON:0004571;2.30e-09;33!UBERON:0002185;5.90e-07;5!UBERON:0003834;8.91e-07;5!UBERON:0001533;8.91e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001529,7.31e-16,2;UBERON:0007204,7.31e-16,2;UBERON:0004815,5.98e-11,3;UBERON:0002031,5.98e-11,3;UBERON:0004573,2.96e-10,33;UBERON:0004571,2.96e-10,33;UBERON:0003081,1.88e-08,203;UBERON:0001637,6.96e-08,42;UBERON:0003509,6.96e-08,42;UBERON:0004572,6.96e-08,42;UBERON:0002204,3.77e-07,167;UBERON:0002185,6.65e-07,5;UBERON:0003834,9.73e-07,5;UBERON:0001533,9.73e-07,5 | |||
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| ||
|short_description=p@chr10:33247025..33247030,+ | |short_description=p@chr10:33247025..33247030,+ | ||
}} | }} |
Latest revision as of 13:20, 23 July 2015
Short description: | p@chr10:33247025..33247030, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:33247025..33247030, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the brachiocephalic vasculature | 7.31e-16 | 2 |
bronchial epithelial cell | 5.98e-11 | 3 |
classical monocyte | 2.01e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.01e-10 | 42 |
respiratory epithelial cell | 1.94e-09 | 13 |
defensive cell | 5.56e-09 | 48 |
phagocyte | 5.56e-09 | 48 |
epithelial cell of tracheobronchial tree | 5.27e-08 | 9 |
epithelial cell of lower respiratory tract | 5.27e-08 | 9 |
vascular associated smooth muscle cell | 8.14e-08 | 32 |
monopoietic cell | 5.79e-07 | 59 |
monocyte | 5.79e-07 | 59 |
monoblast | 5.79e-07 | 59 |
promonocyte | 5.79e-07 | 59 |
smooth muscle cell of the subclavian artery | 9.73e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
brachiocephalic artery | 7.31e-16 | 2 |
brachiocephalic vasculature | 7.31e-16 | 2 |
lower respiratory tract epithelium | 5.98e-11 | 3 |
epithelium of bronchus | 5.98e-11 | 3 |
systemic artery | 2.96e-10 | 33 |
systemic arterial system | 2.96e-10 | 33 |
lateral plate mesoderm | 1.88e-08 | 203 |
artery | 6.96e-08 | 42 |
arterial blood vessel | 6.96e-08 | 42 |
arterial system | 6.96e-08 | 42 |
musculoskeletal system | 3.77e-07 | 167 |
bronchus | 6.65e-07 | 5 |
thoracic segment blood vessel | 9.73e-07 | 5 |
subclavian artery | 9.73e-07 | 5 |