FFCP PHASE1:Hg19::chr10:35701454..35701488,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:35701454..35701488,+ to FFCP PHASE1:Hg19::chr10:35701454..35701488,+: NSchange) |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:35701454..35701488,+ | |||
|description=CAGE_peak_at_chr10:35701454..35701488,+ | |||
|id=chr10:35701454..35701488,+ | |||
|ontology_enrichment_celltype=CL:0000077!2.02e-07!19 | |||
|ontology_enrichment_celltype_v019=CL:0002568;2.30e-21;1!CL:0000306;1.28e-20;4!CL:0002222;1.28e-20;4!CL:0002224;1.28e-20;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002568,2.82e-21,1;CL:0000306,1.41e-20,4;CL:0002222,1.41e-20,4;CL:0002224,1.41e-20,4 | |||
|ontology_enrichment_development_v019=UBERON:0006238;3.43e-08;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3093;1.40e-07;11 | |||
|ontology_enrichment_disease_v019_2=DOID:3093,1.29e-07,11 | |||
|ontology_enrichment_uberon=UBERON:0007625!2.15e-07!11;UBERON:0002346!6.05e-07!90;UBERON:0003075!7.31e-07!86;UBERON:0007284!7.31e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0010077;1.28e-20;4!UBERON:0005389;1.28e-20;4!UBERON:0000484;1.28e-20;4!UBERON:0000965;1.28e-20;4!UBERON:0001803;1.28e-20;4!UBERON:0007625;4.04e-08;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010077,1.41e-20,4;UBERON:0005389,1.41e-20,4;UBERON:0000484,1.41e-20,4;UBERON:0002546,1.41e-20,4;UBERON:0000965,1.41e-20,4;UBERON:0001803,1.41e-20,4;UBERON:0003073,1.41e-20,4;UBERON:0005426,1.41e-20,4;UBERON:0000076,8.47e-11,8;UBERON:0007625,4.18e-08,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0.672325146451775,0,0,0.487932798790507,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0.622822248995575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0.221533894583621,0,0,0.130059347559878,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0.144824403882799,0,0,0,0,0,0,0,0,0.189069634328136,0,0.175669571386252,0,0.364295288292542,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241011029883482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.857839051492628,0,0,0,0,0,0,1.44331342025273,0,0.469634776943287,0,0,0,0,0,0,0.702012795417713,0,0,0.839910640994298,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,2.06834745212444,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0,0.299918973546171,0,0,0,0,0,0,0.579125226670317,0,0.537182889719687,0,0,0.215627574859517,0.256686072559497,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0.207970861530807,0,0.157702415033935,0,0,0,0,1.32845119707087,0,0,0,0.343143423810856,0,0,0.106727557803444,0,0,0,0,0,0.280660094433074,0.384417447767103,0,0,0,0.154209693802656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0,0.457847324091717,0.495056999523528,0,0,0,0.193341436584244,0.154048617114644,0,0,0,0,0.170453254832202,4.27353771104339,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0.235624804691373,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20453736500431,0,0,0,0,0,0.0986434056369336,0,0,0.969332746095218,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0.120596438625408,0,0.110579259931225,0,0,0,0,0.153900517007594,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0.19606253431774,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0.134802265961354,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0.17472666824203,0,0,0,0,0,0,0,0.274083849293502,0,0,0,0,0,0,0,0,0,0.14405479798815,0,0,1.63085047288337,2.09205692624666,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0.201550417460179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.662091970365432,0,0,0,0,1.19730191562487,0,1.19271615249795,0,0,0,0.129282956361551,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0.221858103073705,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0.521745061811734,0,0,0.406870733204662,0,0,0,0,2.40016658797892,0,0,0,0,0.214441591374926,0.260994291965212,0,0,0,0.537266523244462,1.54400723580486,0.219284049578707,0.176689145945881,0.578742114812744,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567515953566836,0,0,0,0,0,0.157265941855896,0,0,0.212574920101683,0,0,0.318004350653419,0,0,0,0,0.0642292250964595,0,0.159633859057151,0,0.252071696221718,0,0.484426936895553,0,0,0,0,0,0,0,0,0.0752103283492573,0.60511520611056,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0.336283722218824,0,0,0.0887023701626388,0,0,0,0,0,0,0,0.157115589916002,0,0,0.431855182437243,0.47775168788705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0.286679166302903,0,0,0,0.5290268405154,0,0,0,0,0,0.126698501011437,0,0,0,0,0.0757786982182394,0,0,0.103432995861895,0,0,0,0.124149428591716,0.112131862580613,0,0.202117188958219,0,0,0,0.0717222053926763,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0.672325146451775,0,0,0.487932798790507,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0.622822248995575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0.221533894583621,0,0,0.130059347559878,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0.144824403882799,0,0,0,0,0,0,0,0,0.189069634328136,0,0.175669571386252,0,0.364295288292542,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241011029883482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.857839051492628,0,0,0,0,0,0,1.44331342025273,0,0.469634776943287,0,0,0,0,0,0,0.702012795417713,0,0,0.839910640994298,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,2.06834745212444,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0,0.299918973546171,0,0,0,0,0,0,0.579125226670317,0,0.537182889719687,0,0,0.215627574859517,0.256686072559497,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0.207970861530807,0,0.157702415033935,0,0,0,0,1.32845119707087,0,0,0,0.343143423810856,0,0,0.106727557803444,0,0,0,0,0,0.280660094433074,0.384417447767103,0,0,0,0.154209693802656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0,0.457847324091717,0.495056999523528,0,0,0,0.193341436584244,0.154048617114644,0,0,0,0,0.170453254832202,4.27353771104339,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0.235624804691373,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20453736500431,0,0,0,0,0,0.0986434056369336,0,0,0.969332746095218,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0.120596438625408,0,0.110579259931225,0,0,0,0,0.153900517007594,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0.19606253431774,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0.134802265961354,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0.17472666824203,0,0,0,0,0,0,0,0.274083849293502,0,0,0,0,0,0,0,0,0,0.14405479798815,0,0,1.63085047288337,2.09205692624666,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0.201550417460179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.662091970365432,0,0,0,0,1.19730191562487,0,1.19271615249795,0,0,0,0.129282956361551,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0.221858103073705,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0.521745061811734,0,0,0.406870733204662,0,0,0,0,2.40016658797892,0,0,0,0,0.214441591374926,0.260994291965212,0,0,0,0.537266523244462,1.54400723580486,0.219284049578707,0.176689145945881,0.578742114812744,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567515953566836,0,0,0,0,0,0.157265941855896,0,0,0.212574920101683,0,0,0.318004350653419,0,0,0,0,0.0642292250964595,0,0.159633859057151,0,0.252071696221718,0,0.484426936895553,0,0,0,0,0,0,0,0,0.0752103283492573,0.60511520611056,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0.336283722218824,0,0,0.0887023701626388,0,0,0,0,0,0,0,0.157115589916002,0,0,0.431855182437243,0.47775168788705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0.286679166302903,0,0,0,0.5290268405154,0,0,0,0,0,0.126698501011437,0,0,0,0,0.0757786982182394,0,0,0.103432995861895,0,0,0,0.124149428591716,0.112131862580613,0,0.202117188958219,0,0,0,0.0717222053926763,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | ||
|short_description=p@chr10:35701454..35701488,+ | |||
}} | }} |
Latest revision as of 13:27, 23 July 2015
Short description: | p@chr10:35701454..35701488, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:35701454..35701488, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesenchymal stem cell of Wharton's jelly | 2.82e-21 | 1 |
crystallin accumulating cell | 1.41e-20 | 4 |
vertebrate lens cell | 1.41e-20 | 4 |
lens epithelial cell | 1.41e-20 | 4 |
Ontology term | p-value | n |
---|---|---|
cuboidal epithelium | 1.41e-20 | 4 |
transparent eye structure | 1.41e-20 | 4 |
simple cuboidal epithelium | 1.41e-20 | 4 |
cranial placode | 1.41e-20 | 4 |
lens of camera-type eye | 1.41e-20 | 4 |
epithelium of lens | 1.41e-20 | 4 |
lens placode | 1.41e-20 | 4 |
lens vesicle | 1.41e-20 | 4 |
external ectoderm | 8.47e-11 | 8 |
pigment epithelium of eye | 4.18e-08 | 11 |
Ontology term | p-value | n |
---|---|---|
nervous system cancer | 1.29e-07 | 11 |