FFCP PHASE1:Hg19::chr10:47079076..47079087,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:47079076..47079087,+ to FFCP PHASE1:Hg19::chr10:47079076..47079087,+: NSchange) |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:47079076..47079087,+ | |||
|coexpression_cluster_id=C106 | |||
|description=CAGE_peak_at_chr10:47079076..47079087,+ | |||
|id=chr10:47079076..47079087,+ | |||
|ontology_enrichment_celltype=CL:1000415!4.59e-10!2 | |||
|ontology_enrichment_celltype_v019=CL:1000415;3.56e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,9.56e-09,253;CL:1000415,3.56e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0008947;5.46e-54;29!UBERON:0001045;2.75e-14;1!UBERON:0006595;1.17e-07;86 | |||
|ontology_enrichment_disease=DOID:162!3.92e-10!235;DOID:0050687!4.82e-10!143;DOID:14566!8.75e-10!239;DOID:305!9.84e-10!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,9.62e-17,106;DOID:0050687,4.74e-12,143;DOID:162,1.70e-09,235;DOID:14566,2.89e-09,239 | |||
|ontology_enrichment_uberon=UBERON:0001737!2.06e-41!9;UBERON:0001557!1.89e-27!19;UBERON:0008947!2.83e-15!38;UBERON:0003258!2.83e-15!38;UBERON:0000072!3.45e-14!46;UBERON:0000065!5.76e-14!53;UBERON:0000063!6.74e-14!97;UBERON:0001004!1.86e-09!72;UBERON:0004921!3.38e-08!129;UBERON:0004185!3.38e-08!129;UBERON:0001155!3.81e-08!9;UBERON:0001007!6.35e-08!155;UBERON:0001555!6.35e-08!155;UBERON:0007026!6.35e-08!155;UBERON:0004119!9.21e-08!169;UBERON:0000925!9.21e-08!169;UBERON:0006595!9.21e-08!169;UBERON:0002110!5.66e-07!3;UBERON:0006242!5.66e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.07e-118;9!UBERON:0001557;2.07e-118;9!UBERON:0000072;4.69e-37;37!UBERON:0000065;6.51e-29;44!UBERON:0001004;5.86e-16;65!UBERON:0001154;2.75e-14;1!UBERON:0001153;2.75e-14;1!UBERON:0009854;2.75e-14;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,2.07e-118,9;UBERON:0001557,8.94e-56,19;UBERON:0008947,6.01e-41,38;UBERON:0003258,6.01e-41,38;UBERON:0000072,6.64e-33,47;UBERON:0000065,1.70e-28,54;UBERON:0001004,1.75e-20,74;UBERON:0001041,3.04e-17,87;UBERON:0004921,1.09e-14,118;UBERON:0001154,2.75e-14,1;UBERON:0001153,2.75e-14,1;UBERON:0001045,2.75e-14,1;UBERON:0001007,6.09e-14,145;UBERON:0001555,6.09e-14,145;UBERON:0007026,6.09e-14,145;UBERON:0004119,1.67e-12,160;UBERON:0000925,1.67e-12,160;UBERON:0006595,1.67e-12,160;UBERON:0001048,1.29e-10,160;UBERON:0011216,5.36e-07,223 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.8842256036656,7.92348043367078,9.3994301654558,8.82351781859152,12.6370077573596,8.30447166888838,6.87639671616838,6.67152981426177,5.38646019724947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0.296964680832639,0,0,0,0,0,0,0,1.65770349318689,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.544692317594951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.176915129006678,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.416024019039416,0,0,0,0,0,0.0967563312890851,0,0.164230914106418,0,0,0,0,0,0,13.6885967914362,0.160317640503067,0,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0.449947783103001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,4.27717094710824,1.40963004463334,0,0,0.828478110694391,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,1.81364740409818,0.231522474323834,0,0,3.70561736593167,0.219284049578707,0,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.863710364874486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.8842256036656,7.92348043367078,9.3994301654558,8.82351781859152,12.6370077573596,8.30447166888838,6.87639671616838,6.67152981426177,5.38646019724947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0.296964680832639,0,0,0,0,0,0,0,1.65770349318689,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.544692317594951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.176915129006678,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.416024019039416,0,0,0,0,0,0.0967563312890851,0,0.164230914106418,0,0,0,0,0,0,13.6885967914362,0.160317640503067,0,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0.449947783103001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,4.27717094710824,1.40963004463334,0,0,0.828478110694391,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,1.81364740409818,0.231522474323834,0,0,3.70561736593167,0.219284049578707,0,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.863710364874486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr10:47079076..47079087,+ | |||
}} | }} |
Latest revision as of 13:51, 23 July 2015
Short description: | p@chr10:47079076..47079087, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:47079076..47079087, + |
Coexpression cluster: | C106_Hep2_epitheloid_placenta_cervical_rectal_anaplastic_glassy |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 9.56e-09 | 253 |
epithelial cell of gall bladder | 3.56e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
larynx | 2.07e-118 | 9 |
upper respiratory tract | 8.94e-56 | 19 |
respiratory primordium | 6.01e-41 | 38 |
endoderm of foregut | 6.01e-41 | 38 |
segment of respiratory tract | 6.64e-33 | 47 |
respiratory tract | 1.70e-28 | 54 |
respiratory system | 1.75e-20 | 74 |
foregut | 3.04e-17 | 87 |
subdivision of digestive tract | 1.09e-14 | 118 |
vermiform appendix | 2.75e-14 | 1 |
caecum | 2.75e-14 | 1 |
midgut | 2.75e-14 | 1 |
digestive system | 6.09e-14 | 145 |
digestive tract | 6.09e-14 | 145 |
primitive gut | 6.09e-14 | 145 |
endoderm-derived structure | 1.67e-12 | 160 |
endoderm | 1.67e-12 | 160 |
presumptive endoderm | 1.67e-12 | 160 |
primordium | 1.29e-10 | 160 |
organ system subdivision | 5.36e-07 | 223 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 9.62e-17 | 106 |
cell type cancer | 4.74e-12 | 143 |
cancer | 1.70e-09 | 235 |
disease of cellular proliferation | 2.89e-09 | 239 |