FFCP PHASE1:Hg19::chr10:4713710..4713728,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:4713710..4713728,+ | |||
|description=CAGE_peak_at_chr10:4713710..4713728,+ | |description=CAGE_peak_at_chr10:4713710..4713728,+ | ||
|id=chr10:4713710..4713728,+ | |id=chr10:4713710..4713728,+ | ||
|ontology_enrichment_celltype=CL:0002076!2.86e-18!43;CL:0000223!4.77e-17!59;CL:0000066!8.17e-15!254;CL:0002251!7.51e-10!21;CL:0000150!4.81e-07!9 | |ontology_enrichment_celltype=CL:0002076!2.86e-18!43;CL:0000223!4.77e-17!59;CL:0000066!8.17e-15!254;CL:0002251!7.51e-10!21;CL:0000150!4.81e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0002166;4.80e-18;3!CL:0000244;1.12e-13;4!CL:0000731;1.12e-13;4!CL:0002159;8.26e-07;14 | |ontology_enrichment_celltype_v019=CL:0002166;4.80e-18;3!CL:0000244;1.12e-13;4!CL:0000731;1.12e-13;4!CL:0002159;8.26e-07;14 | ||
|ontology_enrichment_celltype_v019_2=CL:0002166,3.39e-18,3;CL:0000066,3.33e-14,253;CL:0000244,5.55e-14,4;CL:0000731,5.55e-14,4;CL:0000223,7.50e-07,58;CL:0002159,8.41e-07,14 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:305!7.74e-11!106;DOID:0050687!3.30e-09!143;DOID:1749!2.46e-07!14 | |ontology_enrichment_disease=DOID:305!7.74e-11!106;DOID:0050687!3.30e-09!143;DOID:1749!2.46e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:5662;1.68e-07;1!DOID:0060085;3.84e-07;1!DOID:3165;3.84e-07;1!DOID:0060121;3.84e-07;1!DOID:3111;3.84e-07;1!DOID:2438;3.84e-07;1!DOID:4418;3.84e-07;1!DOID:3603;3.84e-07;1 | |ontology_enrichment_disease_v019=DOID:5662;1.68e-07;1!DOID:0060085;3.84e-07;1!DOID:3165;3.84e-07;1!DOID:0060121;3.84e-07;1!DOID:3111;3.84e-07;1!DOID:2438;3.84e-07;1!DOID:4418;3.84e-07;1!DOID:3603;3.84e-07;1 | ||
|ontology_enrichment_disease_v019_2=DOID:305,3.89e-11,106;DOID:0050687,9.13e-10,143;DOID:5662,1.54e-07,1;DOID:0060085,1.97e-07,1;DOID:3165,1.97e-07,1;DOID:0060121,1.97e-07,1;DOID:2438,1.97e-07,1;DOID:4418,1.97e-07,1;DOID:3111,3.21e-07,1;DOID:3603,3.21e-07,1;DOID:162,9.12e-07,235 | |||
|ontology_enrichment_uberon=UBERON:0004119!2.09e-11!169;UBERON:0000925!2.09e-11!169;UBERON:0006595!2.09e-11!169;UBERON:0001007!3.05e-08!155;UBERON:0001555!3.05e-08!155;UBERON:0007026!3.05e-08!155;UBERON:0000165!5.52e-08!28;UBERON:0000930!5.52e-08!28;UBERON:0003102!7.37e-08!95 | |ontology_enrichment_uberon=UBERON:0004119!2.09e-11!169;UBERON:0000925!2.09e-11!169;UBERON:0006595!2.09e-11!169;UBERON:0001007!3.05e-08!155;UBERON:0001555!3.05e-08!155;UBERON:0007026!3.05e-08!155;UBERON:0000165!5.52e-08!28;UBERON:0000930!5.52e-08!28;UBERON:0003102!7.37e-08!95 | ||
|ontology_enrichment_uberon_v019=UBERON:0001708;1.12e-13;4!UBERON:0008895;1.12e-13;4!UBERON:0011159;4.78e-11;5!UBERON:0000365;4.78e-11;5!UBERON:0005910;2.75e-09;6!UBERON:0004913;1.27e-07;1!UBERON:0003703;1.27e-07;1!UBERON:0001174;1.27e-07;1!UBERON:0004914;1.27e-07;1 | |ontology_enrichment_uberon_v019=UBERON:0001708;1.12e-13;4!UBERON:0008895;1.12e-13;4!UBERON:0011159;4.78e-11;5!UBERON:0000365;4.78e-11;5!UBERON:0005910;2.75e-09;6!UBERON:0004913;1.27e-07;1!UBERON:0003703;1.27e-07;1!UBERON:0001174;1.27e-07;1!UBERON:0004914;1.27e-07;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001708,8.63e-14,4;UBERON:0008895,8.63e-14,4;UBERON:0000365,2.74e-11,5;UBERON:0011159,3.89e-11,5;UBERON:0005910,1.73e-09,6;UBERON:0010188,2.32e-09,6;UBERON:0002539,2.32e-09,6;UBERON:0008816,2.32e-09,6;UBERON:0005911,4.32e-08,82;UBERON:0008814,6.59e-08,18;UBERON:0004913,1.27e-07,1;UBERON:0003703,1.27e-07,1;UBERON:0001174,1.27e-07,1;UBERON:0004914,1.27e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0.264818361626438,0,0,0,0,0.49333509683432,0,0.134710672069688,0.163461903113459,0,0,0,0,0,0,0.117434498643765,0.161872944368132,0.140450806702248,0.204154171254893,0.245668634623536,0,0,0,0,0,0.168336113954066,0.125118519871964,0.277064115484183,0,0,0,0,0.358779271377724,0.85422955527427,0,0,0.103052529238439,0.515281080091258,0.37223371266318,0,0.194874010322397,0,0,0,0.710019185033229,0.806016785821122,0,0.386521706326594,0.818238361772504,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.98775256867763,1.1240175325762,0.301586917234893,0.833296006426766,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87467667973554,1.51183915378974,1.27597587518148,1.34337784054272,0.581267877027924,0.766765358330422,0,0,0.414656231081544,0.144119953416961,0,0,0.381988425558278,0,0,0.205654985406647,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0.532844358032199,0.142977993658148,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,1.00253235151642,0.368323955743585,0,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,0.431831832204279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0.096670718292122,0,0.15350367472613,0.137836572484531,0.322260734604821,0,0.0852266274161009,0,1.81813406897076,0.192190067365106,3.44554323735377,0.30347334256665,0,0,0,0,0,0,0,0,0,0.316379424718726,0.190630193923825,0,0,0,0.78494864019923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48111056362756,0,0,0,1.72202149068492,0,1.7737206141467,1.83778720165568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0.47748896947538,0.296964680832639,0.307160702099232,0,0,1.44701316529778,0.16480387422676,0,0,0,0,0.306806047506464,0,0,0.359473404589307,0,0,0,0,0,0,0,0,0,0,0,0.227586896570999,1.5255219017566,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.74297483886435,0,0,0,0,0,0,0,0,0.104421949505455,0,0,0,0,0.19566461893209,2.91336455440911,0,0,0,0,0,0,0.664653872707185,0.661983911750998,0.313932918407225,0,0,0.693373365065693,0,0.0979923974143777,0.0870592065804026,0.17472666824203,0.51595809741485,0,0,0,0.0969890164884194,0,0,1.09633539717401,1.9871461170299,0,0,5.69127623785889,0,0.599428828746391,1.15272333723285,0,0,1.00838358591705,13.6677789121976,0.471388069233591,1.35904206073614,0.941425616810999,0.305994652908965,0,0,0,0,0,0,0,0.229160424011684,0.717873024576814,0,0,0,0,0,0,0,0,0,0.984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,1.05600336519407,0,0.191915197319445,0,0,0.25426853765475,0,0,0,0,0,3.23737241392301,0.226624183040251,0,0,0,0,0.342173675768659,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0.37494122388632,0,0,0,0,0,0,0,0,0.568209015825267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.363697318405119,0.107410557042488,0,0,0.400027764663154,0,0,0,0.57785949122191,0,0,0,0.231522474323834,0,0,0,0,0.706756583783524,0,0,0,0,1.21543982470953,0,0,0,0,0,0,1.69049698686902,0,0,0.344429959321631,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0.392590874004102,0.11796972334774,0,0,0,0,0,0,0,0,0,0.49131575253029,4.13997041407727,0,0,0,0,0,0,0,0,0.638812138197976,0,0,0,0,0,0,2.91529616043611,0,0,0.827356886187777,0,0,0,0,0,1.94334832096759,0,0,0,0,0,0,0.828864656652147,2.21934020222135,0.691259661814092,0,0.946656005844523,0.681707238073262,0,0.68732060563215,0.93061915699296,1.91107787795487,0,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0.235676547101626,0,0,0,0,0,0,0,0.357107877211315,7.41079230602953,9.22775716925435,0,0,0,0,0,0,0,0,0,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23345048838675,0,0,0.217716747896961,0.342233301085281,0,0.215166616178029,0,0.162806537221949,0.747091421144008,0,0.449126010532934,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0.264818361626438,0,0,0,0,0.49333509683432,0,0.134710672069688,0.163461903113459,0,0,0,0,0,0,0.117434498643765,0.161872944368132,0.140450806702248,0.204154171254893,0.245668634623536,0,0,0,0,0,0.168336113954066,0.125118519871964,0.277064115484183,0,0,0,0,0.358779271377724,0.85422955527427,0,0,0.103052529238439,0.515281080091258,0.37223371266318,0,0.194874010322397,0,0,0,0.710019185033229,0.806016785821122,0,0.386521706326594,0.818238361772504,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.98775256867763,1.1240175325762,0.301586917234893,0.833296006426766,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87467667973554,1.51183915378974,1.27597587518148,1.34337784054272,0.581267877027924,0.766765358330422,0,0,0.414656231081544,0.144119953416961,0,0,0.381988425558278,0,0,0.205654985406647,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0.532844358032199,0.142977993658148,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,1.00253235151642,0.368323955743585,0,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,0.431831832204279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0.096670718292122,0,0.15350367472613,0.137836572484531,0.322260734604821,0,0.0852266274161009,0,1.81813406897076,0.192190067365106,3.44554323735377,0.30347334256665,0,0,0,0,0,0,0,0,0,0.316379424718726,0.190630193923825,0,0,0,0.78494864019923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48111056362756,0,0,0,1.72202149068492,0,1.7737206141467,1.83778720165568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0.47748896947538,0.296964680832639,0.307160702099232,0,0,1.44701316529778,0.16480387422676,0,0,0,0,0.306806047506464,0,0,0.359473404589307,0,0,0,0,0,0,0,0,0,0,0,0.227586896570999,1.5255219017566,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.74297483886435,0,0,0,0,0,0,0,0,0.104421949505455,0,0,0,0,0.19566461893209,2.91336455440911,0,0,0,0,0,0,0.664653872707185,0.661983911750998,0.313932918407225,0,0,0.693373365065693,0,0.0979923974143777,0.0870592065804026,0.17472666824203,0.51595809741485,0,0,0,0.0969890164884194,0,0,1.09633539717401,1.9871461170299,0,0,5.69127623785889,0,0.599428828746391,1.15272333723285,0,0,1.00838358591705,13.6677789121976,0.471388069233591,1.35904206073614,0.941425616810999,0.305994652908965,0,0,0,0,0,0,0,0.229160424011684,0.717873024576814,0,0,0,0,0,0,0,0,0,0.984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,1.05600336519407,0,0.191915197319445,0,0,0.25426853765475,0,0,0,0,0,3.23737241392301,0.226624183040251,0,0,0,0,0.342173675768659,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0.37494122388632,0,0,0,0,0,0,0,0,0.568209015825267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.363697318405119,0.107410557042488,0,0,0.400027764663154,0,0,0,0.57785949122191,0,0,0,0.231522474323834,0,0,0,0,0.706756583783524,0,0,0,0,1.21543982470953,0,0,0,0,0,0,1.69049698686902,0,0,0.344429959321631,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0.392590874004102,0.11796972334774,0,0,0,0,0,0,0,0,0,0.49131575253029,4.13997041407727,0,0,0,0,0,0,0,0,0.638812138197976,0,0,0,0,0,0,2.91529616043611,0,0,0.827356886187777,0,0,0,0,0,1.94334832096759,0,0,0,0,0,0,0.828864656652147,2.21934020222135,0.691259661814092,0,0.946656005844523,0.681707238073262,0,0.68732060563215,0.93061915699296,1.91107787795487,0,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0.235676547101626,0,0,0,0,0,0,0,0.357107877211315,7.41079230602953,9.22775716925435,0,0,0,0,0,0,0,0,0,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23345048838675,0,0,0.217716747896961,0.342233301085281,0,0.215166616178029,0,0.162806537221949,0.747091421144008,0,0.449126010532934,0,0,0,0,0,0 | ||
|short_description=p@chr10:4713710..4713728,+ | |short_description=p@chr10:4713710..4713728,+ | ||
}} | }} |
Latest revision as of 13:51, 23 July 2015
Short description: | p@chr10:4713710..4713728, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:4713710..4713728, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of Malassez | 3.39e-18 | 3 |
epithelial cell | 3.33e-14 | 253 |
transitional epithelial cell | 5.55e-14 | 4 |
urothelial cell | 5.55e-14 | 4 |
endodermal cell | 7.50e-07 | 58 |
general ecto-epithelial cell | 8.41e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
jaw skeleton | 8.63e-14 | 4 |
splanchnocranium | 8.63e-14 | 4 |
urothelium | 2.74e-11 | 5 |
primary subdivision of cranial skeletal system | 3.89e-11 | 5 |
transitional epithelium | 1.73e-09 | 6 |
protuberance | 2.32e-09 | 6 |
pharyngeal arch | 2.32e-09 | 6 |
embryonic head | 2.32e-09 | 6 |
endo-epithelium | 4.32e-08 | 82 |
pharyngeal arch system | 6.59e-08 | 18 |
hepatopancreatic ampulla | 1.27e-07 | 1 |
extrahepatic bile duct | 1.27e-07 | 1 |
common bile duct | 1.27e-07 | 1 |
duodenal papilla | 1.27e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 3.89e-11 | 106 |
cell type cancer | 9.13e-10 | 143 |
pleomorphic carcinoma | 1.54e-07 | 1 |
organ system benign neoplasm | 1.97e-07 | 1 |
skin benign neoplasm | 1.97e-07 | 1 |
integumentary system benign neoplasm | 1.97e-07 | 1 |
dermis tumor | 1.97e-07 | 1 |
cutaneous fibrous histiocytoma | 1.97e-07 | 1 |
cystadenocarcinoma | 3.21e-07 | 1 |
mucinous cystadenocarcinoma | 3.21e-07 | 1 |
cancer | 9.12e-07 | 235 |