FFCP PHASE1:Hg19::chr10:4806256..4806291,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:4806256..4806291,- | |||
|description=CAGE_peak_at_chr10:4806256..4806291,- | |description=CAGE_peak_at_chr10:4806256..4806291,- | ||
|id=chr10:4806256..4806291,- | |id=chr10:4806256..4806291,- | ||
|ontology_enrichment_celltype=CL:0000055!1.10e-18!180;CL:0000057!1.40e-18!75;CL:0002620!2.09e-15!23;CL:0002371!1.69e-11!591;CL:0000548!1.78e-11!679;CL:0000004!1.78e-11!679;CL:0000255!1.78e-11!679;CL:0000012!3.56e-11!682;CL:0000144!3.02e-08!625;CL:0000003!8.23e-08!722;CL:0002551!1.47e-07!6 | |ontology_enrichment_celltype=CL:0000055!1.10e-18!180;CL:0000057!1.40e-18!75;CL:0002620!2.09e-15!23;CL:0002371!1.69e-11!591;CL:0000548!1.78e-11!679;CL:0000004!1.78e-11!679;CL:0000255!1.78e-11!679;CL:0000012!3.56e-11!682;CL:0000144!3.02e-08!625;CL:0000003!8.23e-08!722;CL:0002551!1.47e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002551;5.84e-15;6!CL:0000056;4.05e-10;4!CL:0002552;5.99e-09;5!CL:0002620;8.58e-09;23!CL:0000515;1.07e-07;3 | |ontology_enrichment_celltype_v019=CL:0002551;5.84e-15;6!CL:0000056;4.05e-10;4!CL:0002552;5.99e-09;5!CL:0002620;8.58e-09;23!CL:0000515;1.07e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002551,4.32e-15,6;CL:0000515,4.60e-10,4;CL:0000057,5.16e-09,76;CL:0002552,6.93e-09,5;CL:0002620,8.99e-09,23 | |||
|ontology_enrichment_development_v019=CL:0000515;4.05e-10;4 | |ontology_enrichment_development_v019=CL:0000515;4.05e-10;4 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003102!1.44e-17!95;UBERON:0002199!5.63e-16!45;UBERON:0002416!5.63e-16!45;UBERON:0002097!4.64e-14!40;UBERON:0000914!1.89e-10!83;UBERON:0002329!1.89e-10!83;UBERON:0003077!1.89e-10!83;UBERON:0003059!1.89e-10!83;UBERON:0007282!1.89e-10!83;UBERON:0009618!1.89e-10!83;UBERON:0007285!1.89e-10!83;UBERON:0000486!8.89e-10!82;UBERON:0005256!1.25e-07!143;UBERON:0004290!3.36e-07!70 | |ontology_enrichment_uberon=UBERON:0003102!1.44e-17!95;UBERON:0002199!5.63e-16!45;UBERON:0002416!5.63e-16!45;UBERON:0002097!4.64e-14!40;UBERON:0000914!1.89e-10!83;UBERON:0002329!1.89e-10!83;UBERON:0003077!1.89e-10!83;UBERON:0003059!1.89e-10!83;UBERON:0007282!1.89e-10!83;UBERON:0009618!1.89e-10!83;UBERON:0007285!1.89e-10!83;UBERON:0000486!8.89e-10!82;UBERON:0005256!1.25e-07!143;UBERON:0004290!3.36e-07!70 | ||
|ontology_enrichment_uberon_v019=UBERON:0002067;1.04e-09;9!UBERON:0001828;5.08e-08;8!UBERON:0002199;4.24e-07;46!UBERON:0002416;4.24e-07;46!UBERON:0002097;9.75e-07;41 | |ontology_enrichment_uberon_v019=UBERON:0002067;1.04e-09;9!UBERON:0001828;5.08e-08;8!UBERON:0002199;4.24e-07;46!UBERON:0002416;4.24e-07;46!UBERON:0002097;9.75e-07;41 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,1.06e-15,99;UBERON:0002067,8.55e-10,9;UBERON:0004016,8.55e-10,9;UBERON:0010083,8.55e-10,9;UBERON:0002199,9.27e-10,46;UBERON:0002416,9.27e-10,46;UBERON:0000486,1.39e-08,83;UBERON:0002097,1.45e-08,41;UBERON:0001828,5.38e-08,8;UBERON:0005256,7.11e-07,122 | |||
|phase1_expression=0,0,0,0,0,0,0,2.52687949370732,0.261185628199839,0,0,0,0,1.98026164736075,0.331397375727916,0,0.602694528023977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795285947051099,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198762407366705,0.860234595106124,0,0,0,0.275118041940067,0.208994966536811,0.258416759169329,2.13459757612026,0.66944122552934,0.402829317109147,0,0.488124115096339,0,0,0,0.44905874525234,0,0,0,0.183201743930407,0,0,0,0,0.12663051166458,1.05927344650575,0.286836620748814,1.06400514659507,0,0,0,0.622422070799533,0,0.326923806226917,0,0,0.70296429550139,1.5608003841516,2.2818872861778,9.71416423586707,3.05329696473789,3.23745888736263,1.96631129383148,15.5157170153719,5.03620700978249,9.09266874346736,1.18800285728205,0,0,0.718618141816238,9.25848626747364,2.75260743718321,24.3816421626081,0,0.30648779579902,0.300476117813194,0.113432183160021,1.25572744982203,0.640672166455702,1.27159140695737,0.300091096084402,0.618315175430633,0.515281080091258,0.37223371266318,3.37552664482532,0.779496041289589,0.757301322732344,0.644349290496095,0,1.06502877754984,0.806016785821122,0.339121184620975,0.193260853163297,0.818238361772504,1.43402297694502,0,0,0,0,0,0,0,0,0,2.78620756819187,2.88751792667834,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0,0,3.07300799144152,0,0.100528972411631,0.370353780634118,0,0,0,0.115930404975077,0,0.144366447761074,0,0.190254152234598,0,0,0,0,0,0,1.00789276919316,1.55952606966625,6.44821363460508,1.16253575405585,3.4504441124869,0,0,0,0,0,0.063497894292169,0,0,0,0.719792448923265,0.600686115687835,0,0.224262168690721,0,0.36669142910475,0,3.57656445851882,1.690605505112,0.26593811658487,0,0.257207374262142,0,0,0,0.542621605391443,0,1.62868092146868,0,0,0,0,0,0,0,0,0,0,4.27910715122155,1.01346914667305,2.87666851570537,1.43248770591916,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.24538298343828,0,1.08506009479894,0,0,0,0.117141414992713,0.601892199455438,0,0,0.664225598535437,0.921845842708516,6.51627108510621,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0.462629081407967,1.06537035187876,0.574890092096664,0.519254429183621,0.464841513839837,0,4.21063587636898,1.28913384510255,0.229628896329213,1.0925470080403,0,0,0.385076685522074,0,0,0,0,0.170093705276516,0,0,0.270946437543853,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0.574265537996172,0.650060246036521,0,0.48335359146061,0,0,0.689182862422653,0.322260734604821,0.725083469571143,0.426133137080504,0.0890320356467374,0.330569830721956,0,0.638063562472921,0.30347334256665,1.85938219718914,1.5740617341532,2.0911118104818,0.924100740528266,0,0.869932992075073,0,0,0,0,0,0.255897791311334,0.42793898803392,0.318203247925937,0,0,0,0.117812402345686,0,0,0,0,0.243713489631284,0,0,0,1.13008116620243,0,0,0,0,1.31178950409327,0.405820753925408,1.54911749049875,0.281695602532241,1.57752487424457,0,0,6.38569915327076,0,0.329294892959902,0,0,0,0.670302275535787,0,0,3.01353760869861,0,0.443430153536676,11.486170010348,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,5.89936136621401,0,0,0,0,0,0.20453736500431,0,0.622079175323615,2.3365771298305,0,0,0,0,0,0,0,0,0,0,0,0.227586896570999,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0,0.457987967009312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.91336455440911,0,0,0,0,0,0,0,0.992975867626496,0.313932918407225,0,0,2.77349346026277,0,0.979923974143776,0.34823682632161,0,0,0,0,0,0,0,0,2.46675464364152,1.39100228192093,0.0633107959558787,0,0.0801588202515337,0,0,0.144090417154106,0,0,0.14405479798815,2.23654564017779,0,0,0.209205692624666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670869375198532,0,0,0,0,0.575745591958336,0,0,0,1.62899880526114,0.864221491201268,3.5924609612035,0,0,3.57814845749386,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0.74988244777264,0,0,0,0,0,1.04478362020812,0.233713309847224,0,1.89403005275089,0.251567901752575,0,0,0.453692771289717,0.15543720058278,0.295710299979268,0.318593534327405,0,0,2.48823724704513,0.797525143673985,0,0,0,0,0.181848659202559,0.107410557042488,0.464033759878494,0.398095888698616,5.200360940621,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0.530067437837643,0,0,0,0,0,0,0.194860308839388,0,0,0,0,5.70542733068293,0,0,0,0,0.368211900503681,0.139879507719444,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,2.7614397042404,0,0,0,0,0,0.163771917510097,24.8398224844636,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0.443511850813194,0,2.40083213212386,0,0,0,6.00649570217173,0,0,0,0,2.59113109462346,2.38875843943525,0,0,0,0,0,0,0.17071847709395,0,0,3.19496401972526,2.72682895229305,0,0,0.93061915699296,1.91107787795487,0,0.294450700845729,0,0,0.205325613712494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509781344063451,0,0,0,0.178553938605658,6.35210769088245,7.06124026864681,0,0,0,0,0,0,0,0.743990036333503,0,0.865253124247578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.69116470193472,0,0,0,0.342233301085281,0,0,0.332660356546013,0,1.17400080465487,0,0.269475606319761,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,2.52687949370732,0.261185628199839,0,0,0,0,1.98026164736075,0.331397375727916,0,0.602694528023977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795285947051099,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198762407366705,0.860234595106124,0,0,0,0.275118041940067,0.208994966536811,0.258416759169329,2.13459757612026,0.66944122552934,0.402829317109147,0,0.488124115096339,0,0,0,0.44905874525234,0,0,0,0.183201743930407,0,0,0,0,0.12663051166458,1.05927344650575,0.286836620748814,1.06400514659507,0,0,0,0.622422070799533,0,0.326923806226917,0,0,0.70296429550139,1.5608003841516,2.2818872861778,9.71416423586707,3.05329696473789,3.23745888736263,1.96631129383148,15.5157170153719,5.03620700978249,9.09266874346736,1.18800285728205,0,0,0.718618141816238,9.25848626747364,2.75260743718321,24.3816421626081,0,0.30648779579902,0.300476117813194,0.113432183160021,1.25572744982203,0.640672166455702,1.27159140695737,0.300091096084402,0.618315175430633,0.515281080091258,0.37223371266318,3.37552664482532,0.779496041289589,0.757301322732344,0.644349290496095,0,1.06502877754984,0.806016785821122,0.339121184620975,0.193260853163297,0.818238361772504,1.43402297694502,0,0,0,0,0,0,0,0,0,2.78620756819187,2.88751792667834,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0,0,3.07300799144152,0,0.100528972411631,0.370353780634118,0,0,0,0.115930404975077,0,0.144366447761074,0,0.190254152234598,0,0,0,0,0,0,1.00789276919316,1.55952606966625,6.44821363460508,1.16253575405585,3.4504441124869,0,0,0,0,0,0.063497894292169,0,0,0,0.719792448923265,0.600686115687835,0,0.224262168690721,0,0.36669142910475,0,3.57656445851882,1.690605505112,0.26593811658487,0,0.257207374262142,0,0,0,0.542621605391443,0,1.62868092146868,0,0,0,0,0,0,0,0,0,0,4.27910715122155,1.01346914667305,2.87666851570537,1.43248770591916,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.24538298343828,0,1.08506009479894,0,0,0,0.117141414992713,0.601892199455438,0,0,0.664225598535437,0.921845842708516,6.51627108510621,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0.462629081407967,1.06537035187876,0.574890092096664,0.519254429183621,0.464841513839837,0,4.21063587636898,1.28913384510255,0.229628896329213,1.0925470080403,0,0,0.385076685522074,0,0,0,0,0.170093705276516,0,0,0.270946437543853,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0.574265537996172,0.650060246036521,0,0.48335359146061,0,0,0.689182862422653,0.322260734604821,0.725083469571143,0.426133137080504,0.0890320356467374,0.330569830721956,0,0.638063562472921,0.30347334256665,1.85938219718914,1.5740617341532,2.0911118104818,0.924100740528266,0,0.869932992075073,0,0,0,0,0,0.255897791311334,0.42793898803392,0.318203247925937,0,0,0,0.117812402345686,0,0,0,0,0.243713489631284,0,0,0,1.13008116620243,0,0,0,0,1.31178950409327,0.405820753925408,1.54911749049875,0.281695602532241,1.57752487424457,0,0,6.38569915327076,0,0.329294892959902,0,0,0,0.670302275535787,0,0,3.01353760869861,0,0.443430153536676,11.486170010348,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,5.89936136621401,0,0,0,0,0,0.20453736500431,0,0.622079175323615,2.3365771298305,0,0,0,0,0,0,0,0,0,0,0,0.227586896570999,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0,0.457987967009312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.91336455440911,0,0,0,0,0,0,0,0.992975867626496,0.313932918407225,0,0,2.77349346026277,0,0.979923974143776,0.34823682632161,0,0,0,0,0,0,0,0,2.46675464364152,1.39100228192093,0.0633107959558787,0,0.0801588202515337,0,0,0.144090417154106,0,0,0.14405479798815,2.23654564017779,0,0,0.209205692624666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670869375198532,0,0,0,0,0.575745591958336,0,0,0,1.62899880526114,0.864221491201268,3.5924609612035,0,0,3.57814845749386,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0.74988244777264,0,0,0,0,0,1.04478362020812,0.233713309847224,0,1.89403005275089,0.251567901752575,0,0,0.453692771289717,0.15543720058278,0.295710299979268,0.318593534327405,0,0,2.48823724704513,0.797525143673985,0,0,0,0,0.181848659202559,0.107410557042488,0.464033759878494,0.398095888698616,5.200360940621,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0.530067437837643,0,0,0,0,0,0,0.194860308839388,0,0,0,0,5.70542733068293,0,0,0,0,0.368211900503681,0.139879507719444,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,2.7614397042404,0,0,0,0,0,0.163771917510097,24.8398224844636,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0.443511850813194,0,2.40083213212386,0,0,0,6.00649570217173,0,0,0,0,2.59113109462346,2.38875843943525,0,0,0,0,0,0,0.17071847709395,0,0,3.19496401972526,2.72682895229305,0,0,0.93061915699296,1.91107787795487,0,0.294450700845729,0,0,0.205325613712494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509781344063451,0,0,0,0.178553938605658,6.35210769088245,7.06124026864681,0,0,0,0,0,0,0,0.743990036333503,0,0.865253124247578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.69116470193472,0,0,0,0.342233301085281,0,0,0.332660356546013,0,1.17400080465487,0,0.269475606319761,0,0,0,0,0,0 | ||
|short_description=p@chr10:4806256..4806291,- | |short_description=p@chr10:4806256..4806291,- | ||
}} | }} |
Latest revision as of 13:52, 23 July 2015
Short description: | p@chr10:4806256..4806291, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:4806256..4806291, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of dermis | 4.32e-15 | 6 |
skeletal muscle myoblast | 4.60e-10 | 4 |
fibroblast | 5.16e-09 | 76 |
fibroblast of gingiva | 6.93e-09 | 5 |
skin fibroblast | 8.99e-09 | 23 |
Ontology term | p-value | n |
---|---|---|
surface structure | 1.06e-15 | 99 |
dermis | 8.55e-10 | 9 |
dermatome | 8.55e-10 | 9 |
future dermis | 8.55e-10 | 9 |
integument | 9.27e-10 | 46 |
integumental system | 9.27e-10 | 46 |
multilaminar epithelium | 1.39e-08 | 83 |
skin of body | 1.45e-08 | 41 |
gingiva | 5.38e-08 | 8 |
trunk mesenchyme | 7.11e-07 | 122 |